PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2022-05-13
Number of transmembrane proteins: 7231 (alpha: 6680 , beta: 496 )
Content of 7l2u
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="7l2u" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2021-09-23</CREATE_DATE>
<MODIFICATION>
<DATE>2021-09-23</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>70.43</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="-0.11892804" Y="0.00531029" Z="16.74957848"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-136.02246094"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-135.70991516"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-117.67398834"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
GAMGSRLYDR RSIFDAVAQS NCQELESLLP FLQRSKKRLT DSEFKDPETG
KTCLLKAMLN LHNGQNDTIA LLLDVARKTD SLKQFVNASY TDSYYKGQTA
LHIAIERRNM TLVTLLVENG ADVQAAANGD FFKKTKGRPG FYFGELPLSL
AACTNQLAIV KFLLQNSWQP ADISARDSVG NTVLHALVEV ADNTVDNTKF
VTSMYNEILI LGAKLHPTLK LEEITNRKGL TPLALAASSG KIGVLAYILQ
REIHEPECRH LSRKFTEWAY GPVHSSLYDL SCIDTCEKNS VLEVIAYSSS
ETPNRHDMLL VEPLNRLLQD KWDRFVKRIF YFNFFVYCLY MIIFTAAAYY
RPVEGLPPYK LKNTVGDYFR VTGEILSVSG GVYFFFRGIQ YFLQRRPSLK
SLFVDSYSEI LFFVQSLFML VSVVLYFSQR KEYVASMVFS LAMGWTNMLY
YTRGFQQMGI YAVMIEKMIL RDLCRFMFVY LVFLFGFSTA VVTLIEDGKY
NSLYSTCLEL FKFTIGMGDL EFTENYDFKA VFIILLLAYV ILTYILLLNM
LIALMGETVN KIAQESKNIW KLQRAITILD TEKSFLKCMR KAFRSGKLLQ
VGFTPDGKDD YRWCFRVDEV NWTTWNTNVG IINEDPG
</SEQ>
<REGION seq_beg="87" pdb_beg="191" seq_end="133" pdb_end="237" type="2"/>
<REGION seq_beg="139" pdb_beg="243" seq_end="329" pdb_end="433" type="2"/>
<REGION seq_beg="330" pdb_beg="434" seq_end="351" pdb_end="455" type="H"/>
<REGION seq_beg="352" pdb_beg="456" seq_end="368" pdb_end="472" type="1"/>
<REGION seq_beg="369" pdb_beg="473" seq_end="393" pdb_end="497" type="H"/>
<REGION seq_beg="394" pdb_beg="498" seq_end="406" pdb_end="510" type="2"/>
<REGION seq_beg="407" pdb_beg="511" seq_end="428" pdb_end="532" type="H"/>
<REGION seq_beg="429" pdb_beg="533" seq_end="432" pdb_end="536" type="1"/>
<REGION seq_beg="433" pdb_beg="537" seq_end="453" pdb_end="557" type="H"/>
<REGION seq_beg="454" pdb_beg="558" seq_end="455" pdb_end="559" type="2"/>
<REGION seq_beg="456" pdb_beg="560" seq_end="461" pdb_end="565" type="F"/>
<REGION seq_beg="462" pdb_beg="566" seq_end="494" pdb_end="598" type="H"/>
<REGION seq_beg="495" pdb_beg="599" seq_end="502" pdb_end="629" type="1"/>
<REGION seq_beg="503" pdb_beg="630" seq_end="521" pdb_end="648" type="L"/>
<REGION seq_beg="522" pdb_beg="649" seq_end="530" pdb_end="657" type="1"/>
<REGION seq_beg="531" pdb_beg="658" seq_end="554" pdb_end="681" type="H"/>
<REGION seq_beg="555" pdb_beg="682" seq_end="560" pdb_end="687" type="2"/>
<REGION seq_beg="561" pdb_beg="688" seq_end="584" pdb_end="711" type="F"/>
<REGION seq_beg="585" pdb_beg="712" seq_end="624" pdb_end="751" type="2"/>
</CHAIN>
<CHAIN CHAINID="F" NUM_TM="0" TYPE="non_tm">
<SEQ>
MDCAKEGEVC SWGKKCCDLD NFYCPMEFIP HCKKYKPYVP VTTNCAKEGE
VCGWGSKCCH GLDCPLAFIP YCEKYR
</SEQ>
<REGION seq_beg="2" pdb_beg="1" seq_end="76" pdb_end="75" type="1"/>
</CHAIN>
<CHAIN CHAINID="E" NUM_TM="0" TYPE="non_tm">
<SEQ>
MDCAKEGEVC SWGKKCCDLD NFYCPMEFIP HCKKYKPYVP VTTNCAKEGE
VCGWGSKCCH GLDCPLAFIP YCEKYR
</SEQ>
<REGION seq_beg="2" pdb_beg="1" seq_end="76" pdb_end="75" type="1"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
GAMGSRLYDR RSIFDAVAQS NCQELESLLP FLQRSKKRLT DSEFKDPETG
KTCLLKAMLN LHNGQNDTIA LLLDVARKTD SLKQFVNASY TDSYYKGQTA
LHIAIERRNM TLVTLLVENG ADVQAAANGD FFKKTKGRPG FYFGELPLSL
AACTNQLAIV KFLLQNSWQP ADISARDSVG NTVLHALVEV ADNTVDNTKF
VTSMYNEILI LGAKLHPTLK LEEITNRKGL TPLALAASSG KIGVLAYILQ
REIHEPECRH LSRKFTEWAY GPVHSSLYDL SCIDTCEKNS VLEVIAYSSS
ETPNRHDMLL VEPLNRLLQD KWDRFVKRIF YFNFFVYCLY MIIFTAAAYY
RPVEGLPPYK LKNTVGDYFR VTGEILSVSG GVYFFFRGIQ YFLQRRPSLK
SLFVDSYSEI LFFVQSLFML VSVVLYFSQR KEYVASMVFS LAMGWTNMLY
YTRGFQQMGI YAVMIEKMIL RDLCRFMFVY LVFLFGFSTA VVTLIEDGKY
NSLYSTCLEL FKFTIGMGDL EFTENYDFKA VFIILLLAYV ILTYILLLNM
LIALMGETVN KIAQESKNIW KLQRAITILD TEKSFLKCMR KAFRSGKLLQ
VGFTPDGKDD YRWCFRVDEV NWTTWNTNVG IINEDPG
</SEQ>
<REGION seq_beg="89" pdb_beg="193" seq_end="134" pdb_end="238" type="2"/>
<REGION seq_beg="138" pdb_beg="242" seq_end="329" pdb_end="433" type="2"/>
<REGION seq_beg="330" pdb_beg="434" seq_end="351" pdb_end="455" type="H"/>
<REGION seq_beg="352" pdb_beg="456" seq_end="368" pdb_end="472" type="1"/>
<REGION seq_beg="369" pdb_beg="473" seq_end="393" pdb_end="497" type="H"/>
<REGION seq_beg="394" pdb_beg="498" seq_end="406" pdb_end="510" type="2"/>
<REGION seq_beg="407" pdb_beg="511" seq_end="428" pdb_end="532" type="H"/>
<REGION seq_beg="429" pdb_beg="533" seq_end="432" pdb_end="536" type="1"/>
<REGION seq_beg="433" pdb_beg="537" seq_end="453" pdb_end="557" type="H"/>
<REGION seq_beg="454" pdb_beg="558" seq_end="455" pdb_end="559" type="2"/>
<REGION seq_beg="456" pdb_beg="560" seq_end="461" pdb_end="565" type="F"/>
<REGION seq_beg="462" pdb_beg="566" seq_end="494" pdb_end="598" type="H"/>
<REGION seq_beg="495" pdb_beg="599" seq_end="502" pdb_end="629" type="1"/>
<REGION seq_beg="503" pdb_beg="630" seq_end="520" pdb_end="647" type="L"/>
<REGION seq_beg="521" pdb_beg="648" seq_end="530" pdb_end="657" type="1"/>
<REGION seq_beg="531" pdb_beg="658" seq_end="554" pdb_end="681" type="H"/>
<REGION seq_beg="555" pdb_beg="682" seq_end="561" pdb_end="688" type="2"/>
<REGION seq_beg="562" pdb_beg="689" seq_end="583" pdb_end="710" type="F"/>
<REGION seq_beg="584" pdb_beg="711" seq_end="624" pdb_end="751" type="2"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
GAMGSRLYDR RSIFDAVAQS NCQELESLLP FLQRSKKRLT DSEFKDPETG
KTCLLKAMLN LHNGQNDTIA LLLDVARKTD SLKQFVNASY TDSYYKGQTA
LHIAIERRNM TLVTLLVENG ADVQAAANGD FFKKTKGRPG FYFGELPLSL
AACTNQLAIV KFLLQNSWQP ADISARDSVG NTVLHALVEV ADNTVDNTKF
VTSMYNEILI LGAKLHPTLK LEEITNRKGL TPLALAASSG KIGVLAYILQ
REIHEPECRH LSRKFTEWAY GPVHSSLYDL SCIDTCEKNS VLEVIAYSSS
ETPNRHDMLL VEPLNRLLQD KWDRFVKRIF YFNFFVYCLY MIIFTAAAYY
RPVEGLPPYK LKNTVGDYFR VTGEILSVSG GVYFFFRGIQ YFLQRRPSLK
SLFVDSYSEI LFFVQSLFML VSVVLYFSQR KEYVASMVFS LAMGWTNMLY
YTRGFQQMGI YAVMIEKMIL RDLCRFMFVY LVFLFGFSTA VVTLIEDGKY
NSLYSTCLEL FKFTIGMGDL EFTENYDFKA VFIILLLAYV ILTYILLLNM
LIALMGETVN KIAQESKNIW KLQRAITILD TEKSFLKCMR KAFRSGKLLQ
VGFTPDGKDD YRWCFRVDEV NWTTWNTNVG IINEDPG
</SEQ>
<REGION seq_beg="83" pdb_beg="187" seq_end="134" pdb_end="238" type="2"/>
<REGION seq_beg="139" pdb_beg="243" seq_end="329" pdb_end="433" type="2"/>
<REGION seq_beg="330" pdb_beg="434" seq_end="351" pdb_end="455" type="H"/>
<REGION seq_beg="352" pdb_beg="456" seq_end="368" pdb_end="472" type="1"/>
<REGION seq_beg="369" pdb_beg="473" seq_end="393" pdb_end="497" type="H"/>
<REGION seq_beg="394" pdb_beg="498" seq_end="398" pdb_end="502" type="2"/>
<REGION seq_beg="399" pdb_beg="503" seq_end="404" pdb_end="508" type="F"/>
<REGION seq_beg="405" pdb_beg="509" seq_end="406" pdb_end="510" type="2"/>
<REGION seq_beg="407" pdb_beg="511" seq_end="428" pdb_end="532" type="H"/>
<REGION seq_beg="429" pdb_beg="533" seq_end="432" pdb_end="536" type="1"/>
<REGION seq_beg="433" pdb_beg="537" seq_end="453" pdb_end="557" type="H"/>
<REGION seq_beg="454" pdb_beg="558" seq_end="455" pdb_end="559" type="2"/>
<REGION seq_beg="456" pdb_beg="560" seq_end="461" pdb_end="565" type="F"/>
<REGION seq_beg="462" pdb_beg="566" seq_end="494" pdb_end="598" type="H"/>
<REGION seq_beg="495" pdb_beg="599" seq_end="502" pdb_end="629" type="1"/>
<REGION seq_beg="503" pdb_beg="630" seq_end="521" pdb_end="648" type="L"/>
<REGION seq_beg="522" pdb_beg="649" seq_end="530" pdb_end="657" type="1"/>
<REGION seq_beg="531" pdb_beg="658" seq_end="554" pdb_end="681" type="H"/>
<REGION seq_beg="555" pdb_beg="682" seq_end="568" pdb_end="695" type="2"/>
<REGION seq_beg="569" pdb_beg="696" seq_end="584" pdb_end="711" type="F"/>
<REGION seq_beg="585" pdb_beg="712" seq_end="624" pdb_end="751" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
GAMGSRLYDR RSIFDAVAQS NCQELESLLP FLQRSKKRLT DSEFKDPETG
KTCLLKAMLN LHNGQNDTIA LLLDVARKTD SLKQFVNASY TDSYYKGQTA
LHIAIERRNM TLVTLLVENG ADVQAAANGD FFKKTKGRPG FYFGELPLSL
AACTNQLAIV KFLLQNSWQP ADISARDSVG NTVLHALVEV ADNTVDNTKF
VTSMYNEILI LGAKLHPTLK LEEITNRKGL TPLALAASSG KIGVLAYILQ
REIHEPECRH LSRKFTEWAY GPVHSSLYDL SCIDTCEKNS VLEVIAYSSS
ETPNRHDMLL VEPLNRLLQD KWDRFVKRIF YFNFFVYCLY MIIFTAAAYY
RPVEGLPPYK LKNTVGDYFR VTGEILSVSG GVYFFFRGIQ YFLQRRPSLK
SLFVDSYSEI LFFVQSLFML VSVVLYFSQR KEYVASMVFS LAMGWTNMLY
YTRGFQQMGI YAVMIEKMIL RDLCRFMFVY LVFLFGFSTA VVTLIEDGKY
NSLYSTCLEL FKFTIGMGDL EFTENYDFKA VFIILLLAYV ILTYILLLNM
LIALMGETVN KIAQESKNIW KLQRAITILD TEKSFLKCMR KAFRSGKLLQ
VGFTPDGKDD YRWCFRVDEV NWTTWNTNVG IINEDPG
</SEQ>
<REGION seq_beg="88" pdb_beg="192" seq_end="133" pdb_end="237" type="2"/>
<REGION seq_beg="139" pdb_beg="243" seq_end="329" pdb_end="433" type="2"/>
<REGION seq_beg="330" pdb_beg="434" seq_end="351" pdb_end="455" type="H"/>
<REGION seq_beg="352" pdb_beg="456" seq_end="368" pdb_end="472" type="1"/>
<REGION seq_beg="369" pdb_beg="473" seq_end="393" pdb_end="497" type="H"/>
<REGION seq_beg="394" pdb_beg="498" seq_end="406" pdb_end="510" type="2"/>
<REGION seq_beg="407" pdb_beg="511" seq_end="428" pdb_end="532" type="H"/>
<REGION seq_beg="429" pdb_beg="533" seq_end="432" pdb_end="536" type="1"/>
<REGION seq_beg="433" pdb_beg="537" seq_end="453" pdb_end="557" type="H"/>
<REGION seq_beg="454" pdb_beg="558" seq_end="455" pdb_end="559" type="2"/>
<REGION seq_beg="456" pdb_beg="560" seq_end="461" pdb_end="565" type="F"/>
<REGION seq_beg="462" pdb_beg="566" seq_end="494" pdb_end="598" type="H"/>
<REGION seq_beg="495" pdb_beg="599" seq_end="502" pdb_end="629" type="1"/>
<REGION seq_beg="503" pdb_beg="630" seq_end="521" pdb_end="648" type="L"/>
<REGION seq_beg="522" pdb_beg="649" seq_end="530" pdb_end="657" type="1"/>
<REGION seq_beg="531" pdb_beg="658" seq_end="554" pdb_end="681" type="H"/>
<REGION seq_beg="555" pdb_beg="682" seq_end="567" pdb_end="694" type="2"/>
<REGION seq_beg="568" pdb_beg="695" seq_end="583" pdb_end="710" type="F"/>
<REGION seq_beg="584" pdb_beg="711" seq_end="624" pdb_end="751" type="2"/>
</CHAIN>
</pdbtm>
Overview
7l2u
PDB code:7l2u
Chain(s):A[6], F[0], E[0], B[6], C[6], D[6]
PDBTM type:Tm_Alpha
Title:CRYO-EM STRUCTURE OF DKTX-BOUND MINIMAL TRPV1 IN OPEN STATE
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