PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2022-05-13
Number of transmembrane proteins: 7231 (alpha: 6680 , beta: 496 )
Content of 7l2l
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="7l2l" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2021-09-23</CREATE_DATE>
<MODIFICATION>
<DATE>2021-09-23</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>68.92</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="-0.00515316" Y="0.00292907" Z="16.00000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-148.61311340"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-148.60023499"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-130.48690796"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
GAMGSEQRAS LDSEESESPP QENSCLDPPD RDPNCKPPPV KPHIFTTRSR
TRLFGKGDSE EASPLDCPYE EGGLASCPII TVSSVLTIQR PGDGPASVRP
SSQDSVSAGE KPPRLYDRRS IFDAVAQSNC QELESLLPFL QRSKKRLTDS
EFKDPETGKT CLLKAMLNLH NGQNDTIALL LDVARKTDSL KQFVNASYTD
SYYKGQTALH IAIERRNMTL VTLLVENGAD VQAAANGDFF KKTKGRPGFY
FGELPLSLAA CTNQLAIVKF LLQNSWQPAD ISARDSVGNT VLHALVEVAD
NTVDNTKFVT SMYNEILILG AKLHPTLKLE EITNRKGLTP LALAASSGKI
GVLAYILQRE IHEPECRHLS RKFTEWAYGP VHSSLYDLSC IDTCEKNSVL
EVIAYSSSET PNRHDMLLVE PLNRLLQDKW DRFVKRIFYF NFFVYCLYMI
IFTAAAYYRP VEGLPPYKLK NTVGDYFRVT GEILSVSGGV YFFFRGIQYF
LQRRPSLKSL FVDSYSEILF FVQSLFMLVS VVLYFSQRKE YVASMVFSLA
MGWTNMLYYT RGFQQMGIYA VMIEKMILRD LCRFMFVYLV FLFGFSTAVV
TLIEDGKNNS LPMESTPHKC RGSACKPGNS YNSLYSTCLE LFKFTIGMGD
LEFTENYDFK AVFIILLLAY VILTYILLLN MLIALMGETV NKIAQESKNI
WKLQRAITIL DTEKSFLKCM RKAFRSGKLL QVGFTPDGKD DYRWCFRVDE
VNWTTWNTNV GIINEDPGNC EGVKRTLSFS LRSGRVSGRN WKNFALVPLL
RDASTRDRHA TQQEEVQLKH YTGSLKPEDA EVFKDSMVPG EK
</SEQ>
<REGION seq_beg="287" pdb_beg="283" seq_end="436" pdb_end="432" type="2"/>
<REGION seq_beg="437" pdb_beg="433" seq_end="458" pdb_end="454" type="H"/>
<REGION seq_beg="459" pdb_beg="455" seq_end="477" pdb_end="473" type="1"/>
<REGION seq_beg="478" pdb_beg="474" seq_end="501" pdb_end="497" type="H"/>
<REGION seq_beg="502" pdb_beg="498" seq_end="514" pdb_end="510" type="2"/>
<REGION seq_beg="515" pdb_beg="511" seq_end="536" pdb_end="532" type="H"/>
<REGION seq_beg="537" pdb_beg="533" seq_end="540" pdb_end="536" type="1"/>
<REGION seq_beg="541" pdb_beg="537" seq_end="561" pdb_end="557" type="H"/>
<REGION seq_beg="562" pdb_beg="558" seq_end="566" pdb_end="562" type="2"/>
<REGION seq_beg="567" pdb_beg="563" seq_end="602" pdb_end="598" type="H"/>
<REGION seq_beg="603" pdb_beg="599" seq_end="605" pdb_end="601" type="1"/>
<REGION seq_beg="630" pdb_beg="626" seq_end="634" pdb_end="630" type="1"/>
<REGION seq_beg="635" pdb_beg="631" seq_end="652" pdb_end="648" type="L"/>
<REGION seq_beg="653" pdb_beg="649" seq_end="659" pdb_end="655" type="1"/>
<REGION seq_beg="660" pdb_beg="656" seq_end="686" pdb_end="682" type="H"/>
<REGION seq_beg="687" pdb_beg="683" seq_end="694" pdb_end="690" type="2"/>
<REGION seq_beg="695" pdb_beg="691" seq_end="715" pdb_end="711" type="F"/>
<REGION seq_beg="716" pdb_beg="712" seq_end="730" pdb_end="726" type="2"/>
<REGION seq_beg="742" pdb_beg="738" seq_end="750" pdb_end="746" type="2"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
GAMGSEQRAS LDSEESESPP QENSCLDPPD RDPNCKPPPV KPHIFTTRSR
TRLFGKGDSE EASPLDCPYE EGGLASCPII TVSSVLTIQR PGDGPASVRP
SSQDSVSAGE KPPRLYDRRS IFDAVAQSNC QELESLLPFL QRSKKRLTDS
EFKDPETGKT CLLKAMLNLH NGQNDTIALL LDVARKTDSL KQFVNASYTD
SYYKGQTALH IAIERRNMTL VTLLVENGAD VQAAANGDFF KKTKGRPGFY
FGELPLSLAA CTNQLAIVKF LLQNSWQPAD ISARDSVGNT VLHALVEVAD
NTVDNTKFVT SMYNEILILG AKLHPTLKLE EITNRKGLTP LALAASSGKI
GVLAYILQRE IHEPECRHLS RKFTEWAYGP VHSSLYDLSC IDTCEKNSVL
EVIAYSSSET PNRHDMLLVE PLNRLLQDKW DRFVKRIFYF NFFVYCLYMI
IFTAAAYYRP VEGLPPYKLK NTVGDYFRVT GEILSVSGGV YFFFRGIQYF
LQRRPSLKSL FVDSYSEILF FVQSLFMLVS VVLYFSQRKE YVASMVFSLA
MGWTNMLYYT RGFQQMGIYA VMIEKMILRD LCRFMFVYLV FLFGFSTAVV
TLIEDGKNNS LPMESTPHKC RGSACKPGNS YNSLYSTCLE LFKFTIGMGD
LEFTENYDFK AVFIILLLAY VILTYILLLN MLIALMGETV NKIAQESKNI
WKLQRAITIL DTEKSFLKCM RKAFRSGKLL QVGFTPDGKD DYRWCFRVDE
VNWTTWNTNV GIINEDPGNC EGVKRTLSFS LRSGRVSGRN WKNFALVPLL
RDASTRDRHA TQQEEVQLKH YTGSLKPEDA EVFKDSMVPG EK
</SEQ>
<REGION seq_beg="287" pdb_beg="283" seq_end="436" pdb_end="432" type="2"/>
<REGION seq_beg="437" pdb_beg="433" seq_end="458" pdb_end="454" type="H"/>
<REGION seq_beg="459" pdb_beg="455" seq_end="476" pdb_end="472" type="1"/>
<REGION seq_beg="477" pdb_beg="473" seq_end="501" pdb_end="497" type="H"/>
<REGION seq_beg="502" pdb_beg="498" seq_end="514" pdb_end="510" type="2"/>
<REGION seq_beg="515" pdb_beg="511" seq_end="536" pdb_end="532" type="H"/>
<REGION seq_beg="537" pdb_beg="533" seq_end="540" pdb_end="536" type="1"/>
<REGION seq_beg="541" pdb_beg="537" seq_end="561" pdb_end="557" type="H"/>
<REGION seq_beg="562" pdb_beg="558" seq_end="566" pdb_end="562" type="2"/>
<REGION seq_beg="567" pdb_beg="563" seq_end="602" pdb_end="598" type="H"/>
<REGION seq_beg="603" pdb_beg="599" seq_end="605" pdb_end="601" type="1"/>
<REGION seq_beg="630" pdb_beg="626" seq_end="634" pdb_end="630" type="1"/>
<REGION seq_beg="635" pdb_beg="631" seq_end="652" pdb_end="648" type="L"/>
<REGION seq_beg="653" pdb_beg="649" seq_end="660" pdb_end="656" type="1"/>
<REGION seq_beg="661" pdb_beg="657" seq_end="686" pdb_end="682" type="H"/>
<REGION seq_beg="687" pdb_beg="683" seq_end="694" pdb_end="690" type="2"/>
<REGION seq_beg="695" pdb_beg="691" seq_end="715" pdb_end="711" type="F"/>
<REGION seq_beg="716" pdb_beg="712" seq_end="730" pdb_end="726" type="2"/>
<REGION seq_beg="742" pdb_beg="738" seq_end="750" pdb_end="746" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
GAMGSEQRAS LDSEESESPP QENSCLDPPD RDPNCKPPPV KPHIFTTRSR
TRLFGKGDSE EASPLDCPYE EGGLASCPII TVSSVLTIQR PGDGPASVRP
SSQDSVSAGE KPPRLYDRRS IFDAVAQSNC QELESLLPFL QRSKKRLTDS
EFKDPETGKT CLLKAMLNLH NGQNDTIALL LDVARKTDSL KQFVNASYTD
SYYKGQTALH IAIERRNMTL VTLLVENGAD VQAAANGDFF KKTKGRPGFY
FGELPLSLAA CTNQLAIVKF LLQNSWQPAD ISARDSVGNT VLHALVEVAD
NTVDNTKFVT SMYNEILILG AKLHPTLKLE EITNRKGLTP LALAASSGKI
GVLAYILQRE IHEPECRHLS RKFTEWAYGP VHSSLYDLSC IDTCEKNSVL
EVIAYSSSET PNRHDMLLVE PLNRLLQDKW DRFVKRIFYF NFFVYCLYMI
IFTAAAYYRP VEGLPPYKLK NTVGDYFRVT GEILSVSGGV YFFFRGIQYF
LQRRPSLKSL FVDSYSEILF FVQSLFMLVS VVLYFSQRKE YVASMVFSLA
MGWTNMLYYT RGFQQMGIYA VMIEKMILRD LCRFMFVYLV FLFGFSTAVV
TLIEDGKNNS LPMESTPHKC RGSACKPGNS YNSLYSTCLE LFKFTIGMGD
LEFTENYDFK AVFIILLLAY VILTYILLLN MLIALMGETV NKIAQESKNI
WKLQRAITIL DTEKSFLKCM RKAFRSGKLL QVGFTPDGKD DYRWCFRVDE
VNWTTWNTNV GIINEDPGNC EGVKRTLSFS LRSGRVSGRN WKNFALVPLL
RDASTRDRHA TQQEEVQLKH YTGSLKPEDA EVFKDSMVPG EK
</SEQ>
<REGION seq_beg="287" pdb_beg="283" seq_end="436" pdb_end="432" type="2"/>
<REGION seq_beg="437" pdb_beg="433" seq_end="458" pdb_end="454" type="H"/>
<REGION seq_beg="459" pdb_beg="455" seq_end="477" pdb_end="473" type="1"/>
<REGION seq_beg="478" pdb_beg="474" seq_end="501" pdb_end="497" type="H"/>
<REGION seq_beg="502" pdb_beg="498" seq_end="514" pdb_end="510" type="2"/>
<REGION seq_beg="515" pdb_beg="511" seq_end="536" pdb_end="532" type="H"/>
<REGION seq_beg="537" pdb_beg="533" seq_end="540" pdb_end="536" type="1"/>
<REGION seq_beg="541" pdb_beg="537" seq_end="561" pdb_end="557" type="H"/>
<REGION seq_beg="562" pdb_beg="558" seq_end="566" pdb_end="562" type="2"/>
<REGION seq_beg="567" pdb_beg="563" seq_end="602" pdb_end="598" type="H"/>
<REGION seq_beg="603" pdb_beg="599" seq_end="605" pdb_end="601" type="1"/>
<REGION seq_beg="630" pdb_beg="626" seq_end="634" pdb_end="630" type="1"/>
<REGION seq_beg="635" pdb_beg="631" seq_end="652" pdb_end="648" type="L"/>
<REGION seq_beg="653" pdb_beg="649" seq_end="660" pdb_end="656" type="1"/>
<REGION seq_beg="661" pdb_beg="657" seq_end="686" pdb_end="682" type="H"/>
<REGION seq_beg="687" pdb_beg="683" seq_end="694" pdb_end="690" type="2"/>
<REGION seq_beg="695" pdb_beg="691" seq_end="715" pdb_end="711" type="F"/>
<REGION seq_beg="716" pdb_beg="712" seq_end="730" pdb_end="726" type="2"/>
<REGION seq_beg="742" pdb_beg="738" seq_end="750" pdb_end="746" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
GAMGSEQRAS LDSEESESPP QENSCLDPPD RDPNCKPPPV KPHIFTTRSR
TRLFGKGDSE EASPLDCPYE EGGLASCPII TVSSVLTIQR PGDGPASVRP
SSQDSVSAGE KPPRLYDRRS IFDAVAQSNC QELESLLPFL QRSKKRLTDS
EFKDPETGKT CLLKAMLNLH NGQNDTIALL LDVARKTDSL KQFVNASYTD
SYYKGQTALH IAIERRNMTL VTLLVENGAD VQAAANGDFF KKTKGRPGFY
FGELPLSLAA CTNQLAIVKF LLQNSWQPAD ISARDSVGNT VLHALVEVAD
NTVDNTKFVT SMYNEILILG AKLHPTLKLE EITNRKGLTP LALAASSGKI
GVLAYILQRE IHEPECRHLS RKFTEWAYGP VHSSLYDLSC IDTCEKNSVL
EVIAYSSSET PNRHDMLLVE PLNRLLQDKW DRFVKRIFYF NFFVYCLYMI
IFTAAAYYRP VEGLPPYKLK NTVGDYFRVT GEILSVSGGV YFFFRGIQYF
LQRRPSLKSL FVDSYSEILF FVQSLFMLVS VVLYFSQRKE YVASMVFSLA
MGWTNMLYYT RGFQQMGIYA VMIEKMILRD LCRFMFVYLV FLFGFSTAVV
TLIEDGKNNS LPMESTPHKC RGSACKPGNS YNSLYSTCLE LFKFTIGMGD
LEFTENYDFK AVFIILLLAY VILTYILLLN MLIALMGETV NKIAQESKNI
WKLQRAITIL DTEKSFLKCM RKAFRSGKLL QVGFTPDGKD DYRWCFRVDE
VNWTTWNTNV GIINEDPGNC EGVKRTLSFS LRSGRVSGRN WKNFALVPLL
RDASTRDRHA TQQEEVQLKH YTGSLKPEDA EVFKDSMVPG EK
</SEQ>
<REGION seq_beg="287" pdb_beg="283" seq_end="436" pdb_end="432" type="2"/>
<REGION seq_beg="437" pdb_beg="433" seq_end="458" pdb_end="454" type="H"/>
<REGION seq_beg="459" pdb_beg="455" seq_end="476" pdb_end="472" type="1"/>
<REGION seq_beg="477" pdb_beg="473" seq_end="501" pdb_end="497" type="H"/>
<REGION seq_beg="502" pdb_beg="498" seq_end="514" pdb_end="510" type="2"/>
<REGION seq_beg="515" pdb_beg="511" seq_end="536" pdb_end="532" type="H"/>
<REGION seq_beg="537" pdb_beg="533" seq_end="540" pdb_end="536" type="1"/>
<REGION seq_beg="541" pdb_beg="537" seq_end="561" pdb_end="557" type="H"/>
<REGION seq_beg="562" pdb_beg="558" seq_end="566" pdb_end="562" type="2"/>
<REGION seq_beg="567" pdb_beg="563" seq_end="602" pdb_end="598" type="H"/>
<REGION seq_beg="603" pdb_beg="599" seq_end="605" pdb_end="601" type="1"/>
<REGION seq_beg="630" pdb_beg="626" seq_end="634" pdb_end="630" type="1"/>
<REGION seq_beg="635" pdb_beg="631" seq_end="652" pdb_end="648" type="L"/>
<REGION seq_beg="653" pdb_beg="649" seq_end="660" pdb_end="656" type="1"/>
<REGION seq_beg="661" pdb_beg="657" seq_end="686" pdb_end="682" type="H"/>
<REGION seq_beg="687" pdb_beg="683" seq_end="694" pdb_end="690" type="2"/>
<REGION seq_beg="695" pdb_beg="691" seq_end="715" pdb_end="711" type="F"/>
<REGION seq_beg="716" pdb_beg="712" seq_end="730" pdb_end="726" type="2"/>
<REGION seq_beg="742" pdb_beg="738" seq_end="750" pdb_end="746" type="2"/>
</CHAIN>
</pdbtm>
Overview
7l2l
PDB code:7l2l
Chain(s):A[6], C[6], D[6], B[6]
PDBTM type:Tm_Alpha
Title:CRYO-EM STRUCTURE OF RTX-BOUND FULL-LENGTH TRPV1 IN O1 STATE
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Cross references