PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2022-05-13
Number of transmembrane proteins: 7231 (alpha: 6680 , beta: 496 )
Content of 6yup
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="6yup" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2021-01-21</CREATE_DATE>
<MODIFICATION>
<DATE>2021-01-21</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>50.22</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="-0.04606048" Y="0.07048973" Z="14.24968529"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-133.73342896"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-134.17872620"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-146.87799072"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="1" TYPE="alpha">
<SEQ>
MAEDKSKRDS IEMSMKGCQT NNGFVHNEDI LEQTPDPGSS TDNLKHSTRG
ILGSQEPDFK GVQPYAGMPK EVLFQFSGQA RYRIPREILF WLTVASVLVL
IAATIAIIAL SPKCLDWWQE GPMYQIYPRS FKDSNKDGNG DLKGIQDKLD
YITALNIKTV WITSFYKSSL KDFRYGVEDF REVDPIFGTM EDFENLVAAI
HDKGLKLIID FIPNHTSDKH IWFQLSRTRT GKYTDYYIWH DCTHENGKTI
PPNNWLSVYG NSSWHFDEVR NQCYFHQFMK EQPDLNFRNP DVQEEIKEIL
RFWLTKGVDG FSLDAVKFLL EAKHLRDEIQ VNKTQIPDTV TQYSELYHDF
TTTQVGMHDI VRSFRQTMDQ YSTEPGRYRF MGTEAYAESI DRTVMYYGLP
FIQEADFPFN NYLSMLDTVS GNSVYEVITS WMENMPEGKW PNWMIGGPDS
SRLTSRLGNQ YVNVMNMLLF TLPGTPITYY GEEIGMGNIV AANLNESYDI
NTLRSKSPMQ WDNSSNAGFS EASNTWLPTN SDYHTVNVDV QKTQPRSALK
LYQDLSLLHA NELLLNRGWF CHLRNDSHYV VYTRELDGID RIFIVVLNFG
ESTLLNLHNM ISGLPAKMRI RLSTNSADKG SKVDTSGIFL DKGEGLIFEH
NTKNLLHRQT AFRDRCFVSN RACYSSVLNI LYTSC
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="91" pdb_end="91" type="U"/>
<REGION seq_beg="92" pdb_beg="92" seq_end="92" pdb_end="92" type="2"/>
<REGION seq_beg="93" pdb_beg="93" seq_end="105" pdb_end="105" type="H"/>
<REGION seq_beg="106" pdb_beg="106" seq_end="685" pdb_end="685" type="1"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="1" TYPE="alpha">
<SEQ>
MAEDKSKRDS IEMSMKGCQT NNGFVHNEDI LEQTPDPGSS TDNLKHSTRG
ILGSQEPDFK GVQPYAGMPK EVLFQFSGQA RYRIPREILF WLTVASVLVL
IAATIAIIAL SPKCLDWWQE GPMYQIYPRS FKDSNKDGNG DLKGIQDKLD
YITALNIKTV WITSFYKSSL KDFRYGVEDF REVDPIFGTM EDFENLVAAI
HDKGLKLIID FIPNHTSDKH IWFQLSRTRT GKYTDYYIWH DCTHENGKTI
PPNNWLSVYG NSSWHFDEVR NQCYFHQFMK EQPDLNFRNP DVQEEIKEIL
RFWLTKGVDG FSLDAVKFLL EAKHLRDEIQ VNKTQIPDTV TQYSELYHDF
TTTQVGMHDI VRSFRQTMDQ YSTEPGRYRF MGTEAYAESI DRTVMYYGLP
FIQEADFPFN NYLSMLDTVS GNSVYEVITS WMENMPEGKW PNWMIGGPDS
SRLTSRLGNQ YVNVMNMLLF TLPGTPITYY GEEIGMGNIV AANLNESYDI
NTLRSKSPMQ WDNSSNAGFS EASNTWLPTN SDYHTVNVDV QKTQPRSALK
LYQDLSLLHA NELLLNRGWF CHLRNDSHYV VYTRELDGID RIFIVVLNFG
ESTLLNLHNM ISGLPAKMRI RLSTNSADKG SKVDTSGIFL DKGEGLIFEH
NTKNLLHRQT AFRDRCFVSN RACYSSVLNI LYTSC
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="91" pdb_end="91" type="U"/>
<REGION seq_beg="92" pdb_beg="92" seq_end="92" pdb_end="92" type="2"/>
<REGION seq_beg="93" pdb_beg="93" seq_end="105" pdb_end="105" type="H"/>
<REGION seq_beg="106" pdb_beg="106" seq_end="685" pdb_end="685" type="1"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="12" TYPE="alpha">
<SEQ>
MGDTGLRKRR EDEKSIQSQE PKTTSLQKEL GLISGISIIV GTIIGSGIFV
SPKSVLSNTE AVGPCLIIWA ACGVLATLGA LCFAELGTMI TKSGGEYPYL
MEAYGPIPAY LFSWASLIVI KPTSFAIICL SFSEYVCAPF YVGCKPPQIV
VKCLAAAAIL FISTVNSLSV RLGSYVQNIF TAAKLVIVAI IIISGLVLLA
QGNTKNFDNS FEGAQLSVGA ISLAFYNGLW AYDGWNQLNY ITEELRNPYR
NLPLAIIIGI PLVTACYILM NVSYFTVMTA TELLQSQAVA VTFGDRVLYP
ASWIVPLFVA FSTIGAANGT CFTAGRLIYV AGREGHMLKV LSYISVRRLT
PAPAIIFYGI IATIYIIPGD INSLVNYFSF AAWLFYGLTI LGLIVMRFTR
KELERPIKVP VVIPVLMTLI SVFLVLAPII SKPTWEYLYC VLFILSGLLF
YFLFVHYKFG WAQKISKPIT MHLQMLMEVV PPEEDPE
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="30" pdb_end="30" type="U"/>
<REGION seq_beg="31" pdb_beg="31" seq_end="33" pdb_end="33" type="2"/>
<REGION seq_beg="34" pdb_beg="34" seq_end="56" pdb_end="56" type="H"/>
<REGION seq_beg="57" pdb_beg="57" seq_end="63" pdb_end="63" type="1"/>
<REGION seq_beg="64" pdb_beg="64" seq_end="81" pdb_end="81" type="H"/>
<REGION seq_beg="82" pdb_beg="82" seq_end="91" pdb_end="91" type="2"/>
<REGION seq_beg="92" pdb_beg="92" seq_end="98" pdb_end="98" type="U"/>
<REGION seq_beg="99" pdb_beg="99" seq_end="102" pdb_end="102" type="2"/>
<REGION seq_beg="103" pdb_beg="103" seq_end="105" pdb_end="105" type="U"/>
<REGION seq_beg="106" pdb_beg="106" seq_end="115" pdb_end="115" type="2"/>
<REGION seq_beg="116" pdb_beg="116" seq_end="137" pdb_end="137" type="H"/>
<REGION seq_beg="138" pdb_beg="138" seq_end="148" pdb_end="148" type="1"/>
<REGION seq_beg="149" pdb_beg="149" seq_end="168" pdb_end="168" type="H"/>
<REGION seq_beg="169" pdb_beg="169" seq_end="177" pdb_end="177" type="U"/>
<REGION seq_beg="178" pdb_beg="178" seq_end="178" pdb_end="178" type="2"/>
<REGION seq_beg="179" pdb_beg="179" seq_end="193" pdb_end="193" type="H"/>
<REGION seq_beg="194" pdb_beg="194" seq_end="200" pdb_end="200" type="1"/>
<REGION seq_beg="201" pdb_beg="201" seq_end="218" pdb_end="218" type="U"/>
<REGION seq_beg="219" pdb_beg="219" seq_end="219" pdb_end="219" type="1"/>
<REGION seq_beg="220" pdb_beg="220" seq_end="238" pdb_end="238" type="H"/>
<REGION seq_beg="239" pdb_beg="239" seq_end="254" pdb_end="254" type="2"/>
<REGION seq_beg="255" pdb_beg="255" seq_end="272" pdb_end="272" type="H"/>
<REGION seq_beg="273" pdb_beg="273" seq_end="304" pdb_end="304" type="1"/>
<REGION seq_beg="305" pdb_beg="305" seq_end="317" pdb_end="317" type="H"/>
<REGION seq_beg="318" pdb_beg="318" seq_end="350" pdb_end="350" type="U"/>
<REGION seq_beg="351" pdb_beg="351" seq_end="355" pdb_end="355" type="2"/>
<REGION seq_beg="356" pdb_beg="356" seq_end="372" pdb_end="372" type="H"/>
<REGION seq_beg="373" pdb_beg="373" seq_end="373" pdb_end="373" type="1"/>
<REGION seq_beg="374" pdb_beg="374" seq_end="388" pdb_end="388" type="H"/>
<REGION seq_beg="389" pdb_beg="389" seq_end="395" pdb_end="395" type="2"/>
<REGION seq_beg="396" pdb_beg="396" seq_end="412" pdb_end="412" type="U"/>
<REGION seq_beg="413" pdb_beg="413" seq_end="413" pdb_end="413" type="2"/>
<REGION seq_beg="414" pdb_beg="414" seq_end="429" pdb_end="429" type="H"/>
<REGION seq_beg="430" pdb_beg="430" seq_end="436" pdb_end="436" type="U"/>
<REGION seq_beg="437" pdb_beg="437" seq_end="437" pdb_end="437" type="1"/>
<REGION seq_beg="438" pdb_beg="438" seq_end="447" pdb_end="447" type="H"/>
<REGION seq_beg="448" pdb_beg="448" seq_end="452" pdb_end="452" type="2"/>
<REGION seq_beg="453" pdb_beg="453" seq_end="487" pdb_end="487" type="U"/>
</CHAIN>
<CHAIN CHAINID="E" NUM_TM="12" TYPE="alpha">
<SEQ>
MGDTGLRKRR EDEKSIQSQE PKTTSLQKEL GLISGISIIV GTIIGSGIFV
SPKSVLSNTE AVGPCLIIWA ACGVLATLGA LCFAELGTMI TKSGGEYPYL
MEAYGPIPAY LFSWASLIVI KPTSFAIICL SFSEYVCAPF YVGCKPPQIV
VKCLAAAAIL FISTVNSLSV RLGSYVQNIF TAAKLVIVAI IIISGLVLLA
QGNTKNFDNS FEGAQLSVGA ISLAFYNGLW AYDGWNQLNY ITEELRNPYR
NLPLAIIIGI PLVTACYILM NVSYFTVMTA TELLQSQAVA VTFGDRVLYP
ASWIVPLFVA FSTIGAANGT CFTAGRLIYV AGREGHMLKV LSYISVRRLT
PAPAIIFYGI IATIYIIPGD INSLVNYFSF AAWLFYGLTI LGLIVMRFTR
KELERPIKVP VVIPVLMTLI SVFLVLAPII SKPTWEYLYC VLFILSGLLF
YFLFVHYKFG WAQKISKPIT MHLQMLMEVV PPEEDPE
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="30" pdb_end="30" type="U"/>
<REGION seq_beg="31" pdb_beg="31" seq_end="33" pdb_end="33" type="2"/>
<REGION seq_beg="34" pdb_beg="34" seq_end="59" pdb_end="59" type="H"/>
<REGION seq_beg="60" pdb_beg="60" seq_end="63" pdb_end="63" type="1"/>
<REGION seq_beg="64" pdb_beg="64" seq_end="81" pdb_end="81" type="H"/>
<REGION seq_beg="82" pdb_beg="82" seq_end="91" pdb_end="91" type="2"/>
<REGION seq_beg="92" pdb_beg="92" seq_end="98" pdb_end="98" type="U"/>
<REGION seq_beg="99" pdb_beg="99" seq_end="102" pdb_end="102" type="2"/>
<REGION seq_beg="103" pdb_beg="103" seq_end="105" pdb_end="105" type="U"/>
<REGION seq_beg="106" pdb_beg="106" seq_end="115" pdb_end="115" type="2"/>
<REGION seq_beg="116" pdb_beg="116" seq_end="137" pdb_end="137" type="H"/>
<REGION seq_beg="138" pdb_beg="138" seq_end="148" pdb_end="148" type="1"/>
<REGION seq_beg="149" pdb_beg="149" seq_end="168" pdb_end="168" type="H"/>
<REGION seq_beg="169" pdb_beg="169" seq_end="177" pdb_end="177" type="U"/>
<REGION seq_beg="178" pdb_beg="178" seq_end="178" pdb_end="178" type="2"/>
<REGION seq_beg="179" pdb_beg="179" seq_end="193" pdb_end="193" type="H"/>
<REGION seq_beg="194" pdb_beg="194" seq_end="200" pdb_end="200" type="1"/>
<REGION seq_beg="201" pdb_beg="201" seq_end="218" pdb_end="218" type="U"/>
<REGION seq_beg="219" pdb_beg="219" seq_end="219" pdb_end="219" type="1"/>
<REGION seq_beg="220" pdb_beg="220" seq_end="238" pdb_end="238" type="H"/>
<REGION seq_beg="239" pdb_beg="239" seq_end="254" pdb_end="254" type="2"/>
<REGION seq_beg="255" pdb_beg="255" seq_end="273" pdb_end="273" type="H"/>
<REGION seq_beg="274" pdb_beg="274" seq_end="304" pdb_end="304" type="1"/>
<REGION seq_beg="305" pdb_beg="305" seq_end="317" pdb_end="317" type="H"/>
<REGION seq_beg="318" pdb_beg="318" seq_end="350" pdb_end="350" type="U"/>
<REGION seq_beg="351" pdb_beg="351" seq_end="355" pdb_end="355" type="2"/>
<REGION seq_beg="356" pdb_beg="356" seq_end="372" pdb_end="372" type="H"/>
<REGION seq_beg="373" pdb_beg="373" seq_end="373" pdb_end="373" type="1"/>
<REGION seq_beg="374" pdb_beg="374" seq_end="388" pdb_end="388" type="H"/>
<REGION seq_beg="389" pdb_beg="389" seq_end="395" pdb_end="395" type="2"/>
<REGION seq_beg="396" pdb_beg="396" seq_end="412" pdb_end="412" type="U"/>
<REGION seq_beg="413" pdb_beg="413" seq_end="413" pdb_end="413" type="2"/>
<REGION seq_beg="414" pdb_beg="414" seq_end="429" pdb_end="429" type="H"/>
<REGION seq_beg="430" pdb_beg="430" seq_end="436" pdb_end="436" type="U"/>
<REGION seq_beg="437" pdb_beg="437" seq_end="437" pdb_end="437" type="1"/>
<REGION seq_beg="438" pdb_beg="438" seq_end="447" pdb_end="447" type="H"/>
<REGION seq_beg="448" pdb_beg="448" seq_end="452" pdb_end="452" type="2"/>
<REGION seq_beg="453" pdb_beg="453" seq_end="487" pdb_end="487" type="U"/>
</CHAIN>
</pdbtm>
Overview
6yup
PDB code:6yup
Chain(s):
PDBTM type:Tm_Alpha
Title:HETEROTETRAMERIC STRUCTURE OF THE RBAT-B(0,+)AT1 COMPLEX
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