PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2020-09-18
Number of transmembrane proteins: 5373 (alpha: 4874 , beta: 462 )
Content of 6wb8
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="6wb8" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2020-04-23</CREATE_DATE>
<MODIFICATION>
<DATE>2020-04-23</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>66.42</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="0.00013768" Y="0.00061957" Z="14.75000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-113.39768219"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-113.40373993"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-121.95196533"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
GMGSAAPGGL CEQRGLEIEM QRIRQAAARD PPAGAAASPS PPLSSCSRQA
WSRDNPGFEA EEEEEEVEGE EGGMVVEMDV EWRPGSRRSA ASSAVSSVGA
RSRGLGGYHG AGHPSGRRRR REDQGPPCPS PVGGGDPLHR HLPLEGQPPR
VAWAERLVRG LRGLWGTRLM EESSTNREKY LKSVLRELVT YLLFLIVLCI
LTYGMMSSNV YYYTRMMSQL FLDTPVSKTE KTNFKTLSSM EDFWKFTEGS
LLDGLYWKMQ PSNQTEADNR SFIFYENLLL GVPRIRQLRV RNGSSSIPQD
LRDEIKECYD VYSVSSEDRA PFGPRNGTAW IYTSEKDLNG SSHWGIIATY
SGAGYYLDLS RTREETAAQV ASLKKNVWLD RGTRATFIDF SVYNANINLF
CVVRLLVEFP ATGGVIPSWQ FQPLKLIRYV TTFDFFLAAC EIIFCFFIFY
YVVEEILEIR IHKLHYFRSF WNCLDVVIVV LSVVAIGINI YRTSNVEVLL
QFLEDQNTFP NFEHLAYWQI QFNNIAAVTV FFVWIKLFKF INFNRTMSQL
STTMSRCAKD LFGFAIMFFI IFLAYAQLAY LVFGTQVDDF STFQECIFTQ
FRIILGDINF AEIEEANRVL GPIYFTTFVF FMFFILLNMF LAIINDTYSE
VKSDLAQQKA EMELSDLIRK GYHKALVKLK LKKNTVDDIS ESLRQGGGKL
NFDELRQDLK GKGHTDAEIE AIFTKYDQDG DQELTEHEHQ QMRDDLEKER
EDLDLD
</SEQ>
<REGION seq_beg="180" pdb_beg="216" seq_end="187" pdb_end="223" type="2"/>
<REGION seq_beg="188" pdb_beg="224" seq_end="206" pdb_end="242" type="H"/>
<REGION seq_beg="207" pdb_beg="243" seq_end="259" pdb_end="295" type="1"/>
<REGION seq_beg="266" pdb_beg="302" seq_end="435" pdb_end="471" type="1"/>
<REGION seq_beg="436" pdb_beg="472" seq_end="456" pdb_end="492" type="H"/>
<REGION seq_beg="457" pdb_beg="493" seq_end="457" pdb_end="493" type="2"/>
<REGION seq_beg="468" pdb_beg="504" seq_end="471" pdb_end="507" type="2"/>
<REGION seq_beg="472" pdb_beg="508" seq_end="492" pdb_end="528" type="H"/>
<REGION seq_beg="493" pdb_beg="529" seq_end="519" pdb_end="555" type="1"/>
<REGION seq_beg="520" pdb_beg="556" seq_end="539" pdb_end="575" type="H"/>
<REGION seq_beg="540" pdb_beg="576" seq_end="544" pdb_end="580" type="2"/>
<REGION seq_beg="545" pdb_beg="581" seq_end="564" pdb_end="600" type="F"/>
<REGION seq_beg="565" pdb_beg="601" seq_end="584" pdb_end="620" type="H"/>
<REGION seq_beg="585" pdb_beg="621" seq_end="592" pdb_end="628" type="1"/>
<REGION seq_beg="593" pdb_beg="629" seq_end="610" pdb_end="646" type="L"/>
<REGION seq_beg="611" pdb_beg="647" seq_end="616" pdb_end="652" type="F"/>
<REGION seq_beg="617" pdb_beg="653" seq_end="617" pdb_end="653" type="1"/>
<REGION seq_beg="618" pdb_beg="654" seq_end="641" pdb_end="677" type="H"/>
<REGION seq_beg="642" pdb_beg="678" seq_end="658" pdb_end="694" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
GMGSAAPGGL CEQRGLEIEM QRIRQAAARD PPAGAAASPS PPLSSCSRQA
WSRDNPGFEA EEEEEEVEGE EGGMVVEMDV EWRPGSRRSA ASSAVSSVGA
RSRGLGGYHG AGHPSGRRRR REDQGPPCPS PVGGGDPLHR HLPLEGQPPR
VAWAERLVRG LRGLWGTRLM EESSTNREKY LKSVLRELVT YLLFLIVLCI
LTYGMMSSNV YYYTRMMSQL FLDTPVSKTE KTNFKTLSSM EDFWKFTEGS
LLDGLYWKMQ PSNQTEADNR SFIFYENLLL GVPRIRQLRV RNGSSSIPQD
LRDEIKECYD VYSVSSEDRA PFGPRNGTAW IYTSEKDLNG SSHWGIIATY
SGAGYYLDLS RTREETAAQV ASLKKNVWLD RGTRATFIDF SVYNANINLF
CVVRLLVEFP ATGGVIPSWQ FQPLKLIRYV TTFDFFLAAC EIIFCFFIFY
YVVEEILEIR IHKLHYFRSF WNCLDVVIVV LSVVAIGINI YRTSNVEVLL
QFLEDQNTFP NFEHLAYWQI QFNNIAAVTV FFVWIKLFKF INFNRTMSQL
STTMSRCAKD LFGFAIMFFI IFLAYAQLAY LVFGTQVDDF STFQECIFTQ
FRIILGDINF AEIEEANRVL GPIYFTTFVF FMFFILLNMF LAIINDTYSE
VKSDLAQQKA EMELSDLIRK GYHKALVKLK LKKNTVDDIS ESLRQGGGKL
NFDELRQDLK GKGHTDAEIE AIFTKYDQDG DQELTEHEHQ QMRDDLEKER
EDLDLD
</SEQ>
<REGION seq_beg="180" pdb_beg="216" seq_end="187" pdb_end="223" type="2"/>
<REGION seq_beg="188" pdb_beg="224" seq_end="206" pdb_end="242" type="H"/>
<REGION seq_beg="207" pdb_beg="243" seq_end="259" pdb_end="295" type="1"/>
<REGION seq_beg="266" pdb_beg="302" seq_end="435" pdb_end="471" type="1"/>
<REGION seq_beg="436" pdb_beg="472" seq_end="456" pdb_end="492" type="H"/>
<REGION seq_beg="457" pdb_beg="493" seq_end="457" pdb_end="493" type="2"/>
<REGION seq_beg="468" pdb_beg="504" seq_end="471" pdb_end="507" type="2"/>
<REGION seq_beg="472" pdb_beg="508" seq_end="492" pdb_end="528" type="H"/>
<REGION seq_beg="493" pdb_beg="529" seq_end="519" pdb_end="555" type="1"/>
<REGION seq_beg="520" pdb_beg="556" seq_end="539" pdb_end="575" type="H"/>
<REGION seq_beg="540" pdb_beg="576" seq_end="544" pdb_end="580" type="2"/>
<REGION seq_beg="545" pdb_beg="581" seq_end="564" pdb_end="600" type="F"/>
<REGION seq_beg="565" pdb_beg="601" seq_end="584" pdb_end="620" type="H"/>
<REGION seq_beg="585" pdb_beg="621" seq_end="592" pdb_end="628" type="1"/>
<REGION seq_beg="593" pdb_beg="629" seq_end="610" pdb_end="646" type="L"/>
<REGION seq_beg="611" pdb_beg="647" seq_end="616" pdb_end="652" type="F"/>
<REGION seq_beg="617" pdb_beg="653" seq_end="617" pdb_end="653" type="1"/>
<REGION seq_beg="618" pdb_beg="654" seq_end="641" pdb_end="677" type="H"/>
<REGION seq_beg="642" pdb_beg="678" seq_end="658" pdb_end="694" type="2"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
GMGSAAPGGL CEQRGLEIEM QRIRQAAARD PPAGAAASPS PPLSSCSRQA
WSRDNPGFEA EEEEEEVEGE EGGMVVEMDV EWRPGSRRSA ASSAVSSVGA
RSRGLGGYHG AGHPSGRRRR REDQGPPCPS PVGGGDPLHR HLPLEGQPPR
VAWAERLVRG LRGLWGTRLM EESSTNREKY LKSVLRELVT YLLFLIVLCI
LTYGMMSSNV YYYTRMMSQL FLDTPVSKTE KTNFKTLSSM EDFWKFTEGS
LLDGLYWKMQ PSNQTEADNR SFIFYENLLL GVPRIRQLRV RNGSSSIPQD
LRDEIKECYD VYSVSSEDRA PFGPRNGTAW IYTSEKDLNG SSHWGIIATY
SGAGYYLDLS RTREETAAQV ASLKKNVWLD RGTRATFIDF SVYNANINLF
CVVRLLVEFP ATGGVIPSWQ FQPLKLIRYV TTFDFFLAAC EIIFCFFIFY
YVVEEILEIR IHKLHYFRSF WNCLDVVIVV LSVVAIGINI YRTSNVEVLL
QFLEDQNTFP NFEHLAYWQI QFNNIAAVTV FFVWIKLFKF INFNRTMSQL
STTMSRCAKD LFGFAIMFFI IFLAYAQLAY LVFGTQVDDF STFQECIFTQ
FRIILGDINF AEIEEANRVL GPIYFTTFVF FMFFILLNMF LAIINDTYSE
VKSDLAQQKA EMELSDLIRK GYHKALVKLK LKKNTVDDIS ESLRQGGGKL
NFDELRQDLK GKGHTDAEIE AIFTKYDQDG DQELTEHEHQ QMRDDLEKER
EDLDLD
</SEQ>
<REGION seq_beg="180" pdb_beg="216" seq_end="187" pdb_end="223" type="2"/>
<REGION seq_beg="188" pdb_beg="224" seq_end="206" pdb_end="242" type="H"/>
<REGION seq_beg="207" pdb_beg="243" seq_end="259" pdb_end="295" type="1"/>
<REGION seq_beg="266" pdb_beg="302" seq_end="435" pdb_end="471" type="1"/>
<REGION seq_beg="436" pdb_beg="472" seq_end="456" pdb_end="492" type="H"/>
<REGION seq_beg="457" pdb_beg="493" seq_end="457" pdb_end="493" type="2"/>
<REGION seq_beg="468" pdb_beg="504" seq_end="471" pdb_end="507" type="2"/>
<REGION seq_beg="472" pdb_beg="508" seq_end="492" pdb_end="528" type="H"/>
<REGION seq_beg="493" pdb_beg="529" seq_end="519" pdb_end="555" type="1"/>
<REGION seq_beg="520" pdb_beg="556" seq_end="539" pdb_end="575" type="H"/>
<REGION seq_beg="540" pdb_beg="576" seq_end="544" pdb_end="580" type="2"/>
<REGION seq_beg="545" pdb_beg="581" seq_end="564" pdb_end="600" type="F"/>
<REGION seq_beg="565" pdb_beg="601" seq_end="584" pdb_end="620" type="H"/>
<REGION seq_beg="585" pdb_beg="621" seq_end="592" pdb_end="628" type="1"/>
<REGION seq_beg="593" pdb_beg="629" seq_end="610" pdb_end="646" type="L"/>
<REGION seq_beg="611" pdb_beg="647" seq_end="616" pdb_end="652" type="F"/>
<REGION seq_beg="617" pdb_beg="653" seq_end="617" pdb_end="653" type="1"/>
<REGION seq_beg="618" pdb_beg="654" seq_end="641" pdb_end="677" type="H"/>
<REGION seq_beg="642" pdb_beg="678" seq_end="658" pdb_end="694" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
GMGSAAPGGL CEQRGLEIEM QRIRQAAARD PPAGAAASPS PPLSSCSRQA
WSRDNPGFEA EEEEEEVEGE EGGMVVEMDV EWRPGSRRSA ASSAVSSVGA
RSRGLGGYHG AGHPSGRRRR REDQGPPCPS PVGGGDPLHR HLPLEGQPPR
VAWAERLVRG LRGLWGTRLM EESSTNREKY LKSVLRELVT YLLFLIVLCI
LTYGMMSSNV YYYTRMMSQL FLDTPVSKTE KTNFKTLSSM EDFWKFTEGS
LLDGLYWKMQ PSNQTEADNR SFIFYENLLL GVPRIRQLRV RNGSSSIPQD
LRDEIKECYD VYSVSSEDRA PFGPRNGTAW IYTSEKDLNG SSHWGIIATY
SGAGYYLDLS RTREETAAQV ASLKKNVWLD RGTRATFIDF SVYNANINLF
CVVRLLVEFP ATGGVIPSWQ FQPLKLIRYV TTFDFFLAAC EIIFCFFIFY
YVVEEILEIR IHKLHYFRSF WNCLDVVIVV LSVVAIGINI YRTSNVEVLL
QFLEDQNTFP NFEHLAYWQI QFNNIAAVTV FFVWIKLFKF INFNRTMSQL
STTMSRCAKD LFGFAIMFFI IFLAYAQLAY LVFGTQVDDF STFQECIFTQ
FRIILGDINF AEIEEANRVL GPIYFTTFVF FMFFILLNMF LAIINDTYSE
VKSDLAQQKA EMELSDLIRK GYHKALVKLK LKKNTVDDIS ESLRQGGGKL
NFDELRQDLK GKGHTDAEIE AIFTKYDQDG DQELTEHEHQ QMRDDLEKER
EDLDLD
</SEQ>
<REGION seq_beg="180" pdb_beg="216" seq_end="187" pdb_end="223" type="2"/>
<REGION seq_beg="188" pdb_beg="224" seq_end="206" pdb_end="242" type="H"/>
<REGION seq_beg="207" pdb_beg="243" seq_end="259" pdb_end="295" type="1"/>
<REGION seq_beg="266" pdb_beg="302" seq_end="435" pdb_end="471" type="1"/>
<REGION seq_beg="436" pdb_beg="472" seq_end="456" pdb_end="492" type="H"/>
<REGION seq_beg="457" pdb_beg="493" seq_end="457" pdb_end="493" type="2"/>
<REGION seq_beg="468" pdb_beg="504" seq_end="471" pdb_end="507" type="2"/>
<REGION seq_beg="472" pdb_beg="508" seq_end="492" pdb_end="528" type="H"/>
<REGION seq_beg="493" pdb_beg="529" seq_end="519" pdb_end="555" type="1"/>
<REGION seq_beg="520" pdb_beg="556" seq_end="539" pdb_end="575" type="H"/>
<REGION seq_beg="540" pdb_beg="576" seq_end="544" pdb_end="580" type="2"/>
<REGION seq_beg="545" pdb_beg="581" seq_end="564" pdb_end="600" type="F"/>
<REGION seq_beg="565" pdb_beg="601" seq_end="584" pdb_end="620" type="H"/>
<REGION seq_beg="585" pdb_beg="621" seq_end="592" pdb_end="628" type="1"/>
<REGION seq_beg="593" pdb_beg="629" seq_end="610" pdb_end="646" type="L"/>
<REGION seq_beg="611" pdb_beg="647" seq_end="616" pdb_end="652" type="F"/>
<REGION seq_beg="617" pdb_beg="653" seq_end="617" pdb_end="653" type="1"/>
<REGION seq_beg="618" pdb_beg="654" seq_end="641" pdb_end="677" type="H"/>
<REGION seq_beg="642" pdb_beg="678" seq_end="658" pdb_end="694" type="2"/>
</CHAIN>
</pdbtm>
Overview
6wb8
PDB code:6wb8
Chain(s):A[6], B[6], C[6], D[6]
PDBTM type:Tm_Alpha
Title:CRYO-EM STRUCTURE OF PKD2 C331S DISEASE VARIANT
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