PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2022-11-25
Number of transmembrane proteins: 7918 (alpha: 7391 , beta: 522 )
Content of 6umm
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="6umm" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2020-02-03</CREATE_DATE>
<MODIFICATION>
<DATE>2020-02-03</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>69.36</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="-0.00000064" Y="0.00000062" Z="12.50000000"/>
<TMATRIX>
<ROWX X="0.97675657" Y="-0.10409430" Z="0.18737927" T="-185.90966797"/>
<ROWY X="0.00000000" Y="0.87416774" Z="0.48562407" T="-246.03761292"/>
<ROWZ X="-0.21435161" Y="-0.47433650" Z="0.85384911" T="-17.29828644"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="2" TYPE="alpha">
<SEQ>
MTARIALASL FVVAAVLAQP WQTTTQRWVL GVSIAAVIVL LAWWKGMFLT
TRIGRALAMV RRNRAEDTVE TDAHRATVVL RVDPAAPAQL PVVVGYLDRY
GITCDKVRIT HRDAGGTRRS WISLTVDAVD NLAALQARSA RIPLQDTTEV
VGRRLADHLR EQGWTVTVVE GVDTPLPVSG KETWRGVADD AGVVAAYRVK
VDDRLDEVLA EIGHLPAEET WTALEFTGSP AEPLLTVCAA VRTSDRPAAK
APLAGLTPAR GRHRPALAAL NPLSTERLDG TAVPL
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="1" pdb_end="1" type="2"/>
<REGION seq_beg="2" pdb_beg="2" seq_end="17" pdb_end="17" type="H"/>
<REGION seq_beg="18" pdb_beg="18" seq_end="27" pdb_end="27" type="1"/>
<REGION seq_beg="28" pdb_beg="28" seq_end="42" pdb_end="42" type="H"/>
<REGION seq_beg="43" pdb_beg="43" seq_end="285" pdb_end="285" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="11" TYPE="alpha">
<SEQ>
MSENTVMPIV RVAVLAAGDD GGRLTEMALP SELPLREILP AVQRIVQPAR
ENDGAADPAA APNPVRLSLA PIGGAPFSLD ATLDTVGVVD GDLLALQAVP
SGPPAPRIVE DIADAAVIFS EARRRQWGPT HIARGAALAL IGLILVGTGL
SVAHRVITGD LLGQFIVSGI ALATVIAALA VRNRSAVLAT SLAVTALVPV
AAAFALGVPG DFGAPNVLLA AAGVAAWSLI SMAGSPDDRG IAVFTATAVT
GVGVLLVAGA ASLWVISSDV IGCALVLLGL IVTVQAAQLS AMWARFPLPV
IPAPGDPTPA ARPLSVLADL PRRVRVSQAH QTGVIAAGVL LGVAGSVALV
SSANASPWAW YIVVAAAAGA ALRARVWDSA ACKAWLLGHS YLLAVALLVA
FVIGDRYQAA LWALAALAVL VLVWIVAALN PKIASPDTYS LPMRRMVGFL
ATGLDASLIP VMALLVGLFS LVLDR
</SEQ>
<REGION seq_beg="7" pdb_beg="7" seq_end="49" pdb_end="49" type="2"/>
<REGION seq_beg="61" pdb_beg="61" seq_end="139" pdb_end="139" type="2"/>
<REGION seq_beg="140" pdb_beg="140" seq_end="155" pdb_end="155" type="H"/>
<REGION seq_beg="156" pdb_beg="156" seq_end="162" pdb_end="162" type="1"/>
<REGION seq_beg="163" pdb_beg="163" seq_end="177" pdb_end="177" type="H"/>
<REGION seq_beg="178" pdb_beg="178" seq_end="192" pdb_end="192" type="2"/>
<REGION seq_beg="193" pdb_beg="193" seq_end="208" pdb_end="208" type="H"/>
<REGION seq_beg="209" pdb_beg="209" seq_end="214" pdb_end="214" type="1"/>
<REGION seq_beg="215" pdb_beg="215" seq_end="230" pdb_end="230" type="H"/>
<REGION seq_beg="231" pdb_beg="231" seq_end="246" pdb_end="246" type="2"/>
<REGION seq_beg="247" pdb_beg="247" seq_end="263" pdb_end="263" type="H"/>
<REGION seq_beg="264" pdb_beg="264" seq_end="268" pdb_end="268" type="1"/>
<REGION seq_beg="269" pdb_beg="269" seq_end="284" pdb_end="284" type="H"/>
<REGION seq_beg="285" pdb_beg="285" seq_end="285" pdb_end="285" type="2"/>
<REGION seq_beg="286" pdb_beg="286" seq_end="293" pdb_end="293" type="F"/>
<REGION seq_beg="294" pdb_beg="294" seq_end="295" pdb_end="295" type="2"/>
<REGION seq_beg="313" pdb_beg="313" seq_end="336" pdb_end="336" type="2"/>
<REGION seq_beg="337" pdb_beg="337" seq_end="351" pdb_end="351" type="H"/>
<REGION seq_beg="352" pdb_beg="352" seq_end="356" pdb_end="356" type="1"/>
<REGION seq_beg="357" pdb_beg="357" seq_end="371" pdb_end="371" type="H"/>
<REGION seq_beg="372" pdb_beg="372" seq_end="386" pdb_end="386" type="2"/>
<REGION seq_beg="387" pdb_beg="387" seq_end="403" pdb_end="403" type="H"/>
<REGION seq_beg="404" pdb_beg="404" seq_end="407" pdb_end="407" type="1"/>
<REGION seq_beg="408" pdb_beg="408" seq_end="423" pdb_end="423" type="H"/>
<REGION seq_beg="424" pdb_beg="424" seq_end="450" pdb_end="450" type="2"/>
<REGION seq_beg="451" pdb_beg="451" seq_end="466" pdb_end="466" type="H"/>
<REGION seq_beg="467" pdb_beg="467" seq_end="475" pdb_end="475" type="1"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="11" TYPE="alpha">
<SEQ>
MSENTVMPIV RVAVLAAGDD GGRLTEMALP SELPLREILP AVQRIVQPAR
ENDGAADPAA APNPVRLSLA PIGGAPFSLD ATLDTVGVVD GDLLALQAVP
SGPPAPRIVE DIADAAVIFS EARRRQWGPT HIARGAALAL IGLILVGTGL
SVAHRVITGD LLGQFIVSGI ALATVIAALA VRNRSAVLAT SLAVTALVPV
AAAFALGVPG DFGAPNVLLA AAGVAAWSLI SMAGSPDDRG IAVFTATAVT
GVGVLLVAGA ASLWVISSDV IGCALVLLGL IVTVQAAQLS AMWARFPLPV
IPAPGDPTPA ARPLSVLADL PRRVRVSQAH QTGVIAAGVL LGVAGSVALV
SSANASPWAW YIVVAAAAGA ALRARVWDSA ACKAWLLGHS YLLAVALLVA
FVIGDRYQAA LWALAALAVL VLVWIVAALN PKIASPDTYS LPMRRMVGFL
ATGLDASLIP VMALLVGLFS LVLDR
</SEQ>
<REGION seq_beg="7" pdb_beg="7" seq_end="49" pdb_end="49" type="2"/>
<REGION seq_beg="67" pdb_beg="67" seq_end="138" pdb_end="138" type="2"/>
<REGION seq_beg="139" pdb_beg="139" seq_end="155" pdb_end="155" type="H"/>
<REGION seq_beg="156" pdb_beg="156" seq_end="162" pdb_end="162" type="1"/>
<REGION seq_beg="163" pdb_beg="163" seq_end="177" pdb_end="177" type="H"/>
<REGION seq_beg="178" pdb_beg="178" seq_end="192" pdb_end="192" type="2"/>
<REGION seq_beg="193" pdb_beg="193" seq_end="208" pdb_end="208" type="H"/>
<REGION seq_beg="209" pdb_beg="209" seq_end="214" pdb_end="214" type="1"/>
<REGION seq_beg="215" pdb_beg="215" seq_end="230" pdb_end="230" type="H"/>
<REGION seq_beg="231" pdb_beg="231" seq_end="246" pdb_end="246" type="2"/>
<REGION seq_beg="247" pdb_beg="247" seq_end="263" pdb_end="263" type="H"/>
<REGION seq_beg="264" pdb_beg="264" seq_end="268" pdb_end="268" type="1"/>
<REGION seq_beg="269" pdb_beg="269" seq_end="283" pdb_end="283" type="H"/>
<REGION seq_beg="284" pdb_beg="284" seq_end="285" pdb_end="285" type="2"/>
<REGION seq_beg="286" pdb_beg="286" seq_end="293" pdb_end="293" type="F"/>
<REGION seq_beg="294" pdb_beg="294" seq_end="336" pdb_end="336" type="2"/>
<REGION seq_beg="337" pdb_beg="337" seq_end="351" pdb_end="351" type="H"/>
<REGION seq_beg="352" pdb_beg="352" seq_end="355" pdb_end="355" type="1"/>
<REGION seq_beg="356" pdb_beg="356" seq_end="371" pdb_end="371" type="H"/>
<REGION seq_beg="372" pdb_beg="372" seq_end="387" pdb_end="387" type="2"/>
<REGION seq_beg="388" pdb_beg="388" seq_end="403" pdb_end="403" type="H"/>
<REGION seq_beg="404" pdb_beg="404" seq_end="407" pdb_end="407" type="1"/>
<REGION seq_beg="408" pdb_beg="408" seq_end="423" pdb_end="423" type="H"/>
<REGION seq_beg="424" pdb_beg="424" seq_end="450" pdb_end="450" type="2"/>
<REGION seq_beg="451" pdb_beg="451" seq_end="466" pdb_end="466" type="H"/>
<REGION seq_beg="467" pdb_beg="467" seq_end="467" pdb_end="467" type="1"/>
<REGION seq_beg="468" pdb_beg="468" seq_end="473" pdb_end="473" type="F"/>
<REGION seq_beg="474" pdb_beg="474" seq_end="475" pdb_end="475" type="1"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="1" TYPE="alpha">
<SEQ>
FSSRTPVNEN PDGVQYRRGF VTRHQVSGWR FVMRRIASGV ALHDTRMLVD
PLRTQSRAVL TGALILVTGL VGCFIFSLFR P
</SEQ>
<REGION seq_beg="1" pdb_beg="13" seq_end="58" pdb_end="70" type="2"/>
<REGION seq_beg="59" pdb_beg="71" seq_end="76" pdb_end="88" type="H"/>
<REGION seq_beg="77" pdb_beg="89" seq_end="81" pdb_end="93" type="1"/>
</CHAIN>
<CHAIN CHAINID="E" NUM_TM="0" TYPE="non_tm">
<SEQ>
MSRLIFEHQR RLTPPTTRKG TITIEPPPQL PRVVPPSLLR RVLPFLIVIL
IVGMIVALFA TGMRLISPTM LFFPFVLLLA ATALYRGGDN KMRTEEVDAE
RADYLRYLSV VRDNVRAHAA EQRAALEWSH PEPEVLATIP GTRRQWERDP
RDRDFLVLRA GRHDVPLDAA LKVKDTADEI DLEPVAHSAL RGLLDVQRTV
RDAPTGLDVA KLARITVIGE ADEARAAIRA WIAQAVTWHD PTMLGVALAA
PDLESGDWSW LKWLPHVDVP NEADGVGPAR YLTTSTAELR ERLAPALADR
PLFPAESGAA LKHLLVVLDD PDADPDDIAR KPGLTGVTVI HRTTELPNRE
QYPDPERPIL RVADGRIERW QVGGWQPCVD VADAMSAAEA AHIARRLSRW
DSN
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="33" pdb_end="33" type="2"/>
<REGION seq_beg="94" pdb_beg="94" seq_end="403" pdb_end="403" type="2"/>
</CHAIN>
<CHAIN CHAINID="F" NUM_TM="2" TYPE="alpha">
<SEQ>
MTARIALASL FVVAAVLAQP WQTTTQRWVL GVSIAAVIVL LAWWKGMFLT
TRIGRALAMV RRNRAEDTVE TDAHRATVVL RVDPAAPAQL PVVVGYLDRY
GITCDKVRIT HRDAGGTRRS WISLTVDAVD NLAALQARSA RIPLQDTTEV
VGRRLADHLR EQGWTVTVVE GVDTPLPVSG KETWRGVADD AGVVAAYRVK
VDDRLDEVLA EIGHLPAEET WTALEFTGSP AEPLLTVCAA VRTSDRPAAK
APLAGLTPAR GRHRPALAAL NPLSTERLDG TAVPL
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="1" pdb_end="1" type="2"/>
<REGION seq_beg="2" pdb_beg="2" seq_end="16" pdb_end="16" type="H"/>
<REGION seq_beg="17" pdb_beg="17" seq_end="28" pdb_end="28" type="1"/>
<REGION seq_beg="29" pdb_beg="29" seq_end="43" pdb_end="43" type="H"/>
<REGION seq_beg="44" pdb_beg="44" seq_end="285" pdb_end="285" type="2"/>
</CHAIN>
<CHAIN CHAINID="G" NUM_TM="11" TYPE="alpha">
<SEQ>
MSENTVMPIV RVAVLAAGDD GGRLTEMALP SELPLREILP AVQRIVQPAR
ENDGAADPAA APNPVRLSLA PIGGAPFSLD ATLDTVGVVD GDLLALQAVP
SGPPAPRIVE DIADAAVIFS EARRRQWGPT HIARGAALAL IGLILVGTGL
SVAHRVITGD LLGQFIVSGI ALATVIAALA VRNRSAVLAT SLAVTALVPV
AAAFALGVPG DFGAPNVLLA AAGVAAWSLI SMAGSPDDRG IAVFTATAVT
GVGVLLVAGA ASLWVISSDV IGCALVLLGL IVTVQAAQLS AMWARFPLPV
IPAPGDPTPA ARPLSVLADL PRRVRVSQAH QTGVIAAGVL LGVAGSVALV
SSANASPWAW YIVVAAAAGA ALRARVWDSA ACKAWLLGHS YLLAVALLVA
FVIGDRYQAA LWALAALAVL VLVWIVAALN PKIASPDTYS LPMRRMVGFL
ATGLDASLIP VMALLVGLFS LVLDR
</SEQ>
<REGION seq_beg="7" pdb_beg="7" seq_end="49" pdb_end="49" type="2"/>
<REGION seq_beg="61" pdb_beg="61" seq_end="138" pdb_end="138" type="2"/>
<REGION seq_beg="139" pdb_beg="139" seq_end="153" pdb_end="153" type="H"/>
<REGION seq_beg="154" pdb_beg="154" seq_end="163" pdb_end="163" type="1"/>
<REGION seq_beg="164" pdb_beg="164" seq_end="179" pdb_end="179" type="H"/>
<REGION seq_beg="180" pdb_beg="180" seq_end="191" pdb_end="191" type="2"/>
<REGION seq_beg="192" pdb_beg="192" seq_end="208" pdb_end="208" type="H"/>
<REGION seq_beg="209" pdb_beg="209" seq_end="214" pdb_end="214" type="1"/>
<REGION seq_beg="215" pdb_beg="215" seq_end="231" pdb_end="231" type="H"/>
<REGION seq_beg="232" pdb_beg="232" seq_end="243" pdb_end="243" type="2"/>
<REGION seq_beg="244" pdb_beg="244" seq_end="261" pdb_end="261" type="H"/>
<REGION seq_beg="262" pdb_beg="262" seq_end="270" pdb_end="270" type="1"/>
<REGION seq_beg="271" pdb_beg="271" seq_end="285" pdb_end="285" type="H"/>
<REGION seq_beg="286" pdb_beg="286" seq_end="293" pdb_end="293" type="F"/>
<REGION seq_beg="294" pdb_beg="294" seq_end="295" pdb_end="295" type="2"/>
<REGION seq_beg="313" pdb_beg="313" seq_end="333" pdb_end="333" type="2"/>
<REGION seq_beg="334" pdb_beg="334" seq_end="351" pdb_end="351" type="H"/>
<REGION seq_beg="352" pdb_beg="352" seq_end="357" pdb_end="357" type="1"/>
<REGION seq_beg="358" pdb_beg="358" seq_end="373" pdb_end="373" type="H"/>
<REGION seq_beg="374" pdb_beg="374" seq_end="385" pdb_end="385" type="2"/>
<REGION seq_beg="386" pdb_beg="386" seq_end="402" pdb_end="402" type="H"/>
<REGION seq_beg="403" pdb_beg="403" seq_end="409" pdb_end="409" type="1"/>
<REGION seq_beg="410" pdb_beg="410" seq_end="426" pdb_end="426" type="H"/>
<REGION seq_beg="427" pdb_beg="427" seq_end="449" pdb_end="449" type="2"/>
<REGION seq_beg="450" pdb_beg="450" seq_end="465" pdb_end="465" type="H"/>
<REGION seq_beg="466" pdb_beg="466" seq_end="475" pdb_end="475" type="1"/>
</CHAIN>
<CHAIN CHAINID="H" NUM_TM="11" TYPE="alpha">
<SEQ>
MSENTVMPIV RVAVLAAGDD GGRLTEMALP SELPLREILP AVQRIVQPAR
ENDGAADPAA APNPVRLSLA PIGGAPFSLD ATLDTVGVVD GDLLALQAVP
SGPPAPRIVE DIADAAVIFS EARRRQWGPT HIARGAALAL IGLILVGTGL
SVAHRVITGD LLGQFIVSGI ALATVIAALA VRNRSAVLAT SLAVTALVPV
AAAFALGVPG DFGAPNVLLA AAGVAAWSLI SMAGSPDDRG IAVFTATAVT
GVGVLLVAGA ASLWVISSDV IGCALVLLGL IVTVQAAQLS AMWARFPLPV
IPAPGDPTPA ARPLSVLADL PRRVRVSQAH QTGVIAAGVL LGVAGSVALV
SSANASPWAW YIVVAAAAGA ALRARVWDSA ACKAWLLGHS YLLAVALLVA
FVIGDRYQAA LWALAALAVL VLVWIVAALN PKIASPDTYS LPMRRMVGFL
ATGLDASLIP VMALLVGLFS LVLDR
</SEQ>
<REGION seq_beg="7" pdb_beg="7" seq_end="49" pdb_end="49" type="2"/>
<REGION seq_beg="67" pdb_beg="67" seq_end="136" pdb_end="136" type="2"/>
<REGION seq_beg="137" pdb_beg="137" seq_end="153" pdb_end="153" type="H"/>
<REGION seq_beg="154" pdb_beg="154" seq_end="162" pdb_end="162" type="1"/>
<REGION seq_beg="163" pdb_beg="163" seq_end="178" pdb_end="178" type="H"/>
<REGION seq_beg="179" pdb_beg="179" seq_end="192" pdb_end="192" type="2"/>
<REGION seq_beg="193" pdb_beg="193" seq_end="208" pdb_end="208" type="H"/>
<REGION seq_beg="209" pdb_beg="209" seq_end="214" pdb_end="214" type="1"/>
<REGION seq_beg="215" pdb_beg="215" seq_end="231" pdb_end="231" type="H"/>
<REGION seq_beg="232" pdb_beg="232" seq_end="243" pdb_end="243" type="2"/>
<REGION seq_beg="244" pdb_beg="244" seq_end="263" pdb_end="263" type="H"/>
<REGION seq_beg="264" pdb_beg="264" seq_end="269" pdb_end="269" type="1"/>
<REGION seq_beg="270" pdb_beg="270" seq_end="284" pdb_end="284" type="H"/>
<REGION seq_beg="285" pdb_beg="285" seq_end="285" pdb_end="285" type="2"/>
<REGION seq_beg="286" pdb_beg="286" seq_end="293" pdb_end="293" type="F"/>
<REGION seq_beg="294" pdb_beg="294" seq_end="334" pdb_end="334" type="2"/>
<REGION seq_beg="335" pdb_beg="335" seq_end="351" pdb_end="351" type="H"/>
<REGION seq_beg="352" pdb_beg="352" seq_end="357" pdb_end="357" type="1"/>
<REGION seq_beg="358" pdb_beg="358" seq_end="373" pdb_end="373" type="H"/>
<REGION seq_beg="374" pdb_beg="374" seq_end="385" pdb_end="385" type="2"/>
<REGION seq_beg="386" pdb_beg="386" seq_end="402" pdb_end="402" type="H"/>
<REGION seq_beg="403" pdb_beg="403" seq_end="409" pdb_end="409" type="1"/>
<REGION seq_beg="410" pdb_beg="410" seq_end="425" pdb_end="425" type="H"/>
<REGION seq_beg="426" pdb_beg="426" seq_end="449" pdb_end="449" type="2"/>
<REGION seq_beg="450" pdb_beg="450" seq_end="466" pdb_end="466" type="H"/>
<REGION seq_beg="467" pdb_beg="467" seq_end="468" pdb_end="468" type="1"/>
<REGION seq_beg="469" pdb_beg="469" seq_end="474" pdb_end="474" type="F"/>
<REGION seq_beg="475" pdb_beg="475" seq_end="475" pdb_end="475" type="1"/>
</CHAIN>
<CHAIN CHAINID="I" NUM_TM="1" TYPE="alpha">
<SEQ>
FSSRTPVNEN PDGVQYRRGF VTRHQVSGWR FVMRRIASGV ALHDTRMLVD
PLRTQSRAVL TGALILVTGL VGCFIFSLFR P
</SEQ>
<REGION seq_beg="21" pdb_beg="33" seq_end="55" pdb_end="67" type="2"/>
<REGION seq_beg="56" pdb_beg="68" seq_end="75" pdb_end="87" type="H"/>
<REGION seq_beg="76" pdb_beg="88" seq_end="81" pdb_end="93" type="1"/>
</CHAIN>
<CHAIN CHAINID="J" NUM_TM="0" TYPE="non_tm">
<SEQ>
MSRLIFEHQR RLTPPTTRKG TITIEPPPQL PRVVPPSLLR RVLPFLIVIL
IVGMIVALFA TGMRLISPTM LFFPFVLLLA ATALYRGGDN KMRTEEVDAE
RADYLRYLSV VRDNVRAHAA EQRAALEWSH PEPEVLATIP GTRRQWERDP
RDRDFLVLRA GRHDVPLDAA LKVKDTADEI DLEPVAHSAL RGLLDVQRTV
RDAPTGLDVA KLARITVIGE ADEARAAIRA WIAQAVTWHD PTMLGVALAA
PDLESGDWSW LKWLPHVDVP NEADGVGPAR YLTTSTAELR ERLAPALADR
PLFPAESGAA LKHLLVVLDD PDADPDDIAR KPGLTGVTVI HRTTELPNRE
QYPDPERPIL RVADGRIERW QVGGWQPCVD VADAMSAAEA AHIARRLSRW
DSN
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="33" pdb_end="33" type="2"/>
<REGION seq_beg="94" pdb_beg="94" seq_end="403" pdb_end="403" type="2"/>
</CHAIN>
</pdbtm>
Overview
6umm
PDB code:6umm
Chain(s):
PDBTM type:Tm_Alpha
Title:A COMPLETE STRUCTURE OF THE ESX-3 TRANSLOCON COMPLEX
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