PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2020-07-03
Number of transmembrane proteins: 5146 (alpha: 4654 , beta: 460 )
Content of 6u88
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="6u88" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2020-01-31</CREATE_DATE>
<MODIFICATION>
<DATE>2020-01-31</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>73.08</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="-0.00210170" Y="-0.00037214" Z="16.50000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-152.63664246"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-152.63986206"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-176.40400696"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MTSASSPPAF RLETSDGDEE GNAEVNKGKQ EPPPMESPFQ REDRNSSPQI
KVNLNFIKRP PKNTSAPSQQ EPDRFDRDRL FSVVSRGVPE ELTGLLEYLR
WNSKYLTDSA YTEGSTGKTC LMKAVLNLQD GVNACIMPLL QIDKDSGNPK
LLVNAQCTDE FYQGHSALHI AIEKRSLQCV KLLVENGADV HLRACGRFFQ
KHQGTCFYFG ELPLSLAACT KQWDVVTYLL ENPHQPASLE ATDSLGNTVL
HALVMIADNS PENSALVIHM YDGLLQMGAR LCPTVQLEEI SNHQGLTPLK
LAAKEGKIEI FRHILQREFS GPYQPLSRKF TEWCYGPVRV SLYDLSSVDS
WEKNSVLEII AFHCKSPNRH RMVVLEPLNK LLQEKWDRLV SRFFFNFACY
LVYMFIFTVV AYHQPSLDQP AIPSSKATFG ESMLLLGHIL ILLGGIYLLL
GQLWYFWRRR LFIWISFMDS YFEILFLLQA LLTVLSQVLR FMETEWYLPL
LVLSLVLGWL NLLYYTRGFQ HTGIYSVMIQ KVILRDLLRF LLVYLVFLFG
FAVALVSLSR EARSPKAPED NNSTVTEQPT VGQEEEPAPY RSILDASLEL
FKFTIGMGEL AFQEQLRFRG VVLLLLLAYV LLTYVLLLNM LIALMSETVN
HVADNSWSIW KLQKAISVLE MENGYWWCRR KKHREGRLLK VGTRGDGTPD
ERWCFRVEEV NWAAWEKTLP TLSEDPSGPG ITGNKKNPTS KPGKNSASEE
DHLPLQVLQS P
</SEQ>
<REGION seq_beg="75" pdb_beg="75" seq_end="391" pdb_end="391" type="1"/>
<REGION seq_beg="392" pdb_beg="392" seq_end="413" pdb_end="413" type="H"/>
<REGION seq_beg="414" pdb_beg="414" seq_end="415" pdb_end="415" type="2"/>
<REGION seq_beg="429" pdb_beg="429" seq_end="433" pdb_end="433" type="2"/>
<REGION seq_beg="434" pdb_beg="434" seq_end="457" pdb_end="457" type="H"/>
<REGION seq_beg="458" pdb_beg="458" seq_end="470" pdb_end="470" type="1"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="492" pdb_end="492" type="H"/>
<REGION seq_beg="493" pdb_beg="493" seq_end="496" pdb_end="496" type="2"/>
<REGION seq_beg="497" pdb_beg="497" seq_end="519" pdb_end="519" type="H"/>
<REGION seq_beg="520" pdb_beg="520" seq_end="528" pdb_end="528" type="F"/>
<REGION seq_beg="529" pdb_beg="529" seq_end="558" pdb_end="558" type="H"/>
<REGION seq_beg="559" pdb_beg="559" seq_end="563" pdb_end="563" type="2"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="593" pdb_end="593" type="2"/>
<REGION seq_beg="594" pdb_beg="594" seq_end="611" pdb_end="611" type="L"/>
<REGION seq_beg="612" pdb_beg="612" seq_end="620" pdb_end="620" type="2"/>
<REGION seq_beg="621" pdb_beg="621" seq_end="645" pdb_end="645" type="H"/>
<REGION seq_beg="646" pdb_beg="646" seq_end="656" pdb_end="656" type="1"/>
<REGION seq_beg="657" pdb_beg="657" seq_end="671" pdb_end="671" type="F"/>
<REGION seq_beg="672" pdb_beg="672" seq_end="692" pdb_end="692" type="1"/>
<REGION seq_beg="699" pdb_beg="699" seq_end="729" pdb_end="729" type="1"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
MTSASSPPAF RLETSDGDEE GNAEVNKGKQ EPPPMESPFQ REDRNSSPQI
KVNLNFIKRP PKNTSAPSQQ EPDRFDRDRL FSVVSRGVPE ELTGLLEYLR
WNSKYLTDSA YTEGSTGKTC LMKAVLNLQD GVNACIMPLL QIDKDSGNPK
LLVNAQCTDE FYQGHSALHI AIEKRSLQCV KLLVENGADV HLRACGRFFQ
KHQGTCFYFG ELPLSLAACT KQWDVVTYLL ENPHQPASLE ATDSLGNTVL
HALVMIADNS PENSALVIHM YDGLLQMGAR LCPTVQLEEI SNHQGLTPLK
LAAKEGKIEI FRHILQREFS GPYQPLSRKF TEWCYGPVRV SLYDLSSVDS
WEKNSVLEII AFHCKSPNRH RMVVLEPLNK LLQEKWDRLV SRFFFNFACY
LVYMFIFTVV AYHQPSLDQP AIPSSKATFG ESMLLLGHIL ILLGGIYLLL
GQLWYFWRRR LFIWISFMDS YFEILFLLQA LLTVLSQVLR FMETEWYLPL
LVLSLVLGWL NLLYYTRGFQ HTGIYSVMIQ KVILRDLLRF LLVYLVFLFG
FAVALVSLSR EARSPKAPED NNSTVTEQPT VGQEEEPAPY RSILDASLEL
FKFTIGMGEL AFQEQLRFRG VVLLLLLAYV LLTYVLLLNM LIALMSETVN
HVADNSWSIW KLQKAISVLE MENGYWWCRR KKHREGRLLK VGTRGDGTPD
ERWCFRVEEV NWAAWEKTLP TLSEDPSGPG ITGNKKNPTS KPGKNSASEE
DHLPLQVLQS P
</SEQ>
<REGION seq_beg="75" pdb_beg="75" seq_end="391" pdb_end="391" type="1"/>
<REGION seq_beg="392" pdb_beg="392" seq_end="413" pdb_end="413" type="H"/>
<REGION seq_beg="414" pdb_beg="414" seq_end="415" pdb_end="415" type="2"/>
<REGION seq_beg="429" pdb_beg="429" seq_end="433" pdb_end="433" type="2"/>
<REGION seq_beg="434" pdb_beg="434" seq_end="457" pdb_end="457" type="H"/>
<REGION seq_beg="458" pdb_beg="458" seq_end="470" pdb_end="470" type="1"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="492" pdb_end="492" type="H"/>
<REGION seq_beg="493" pdb_beg="493" seq_end="496" pdb_end="496" type="2"/>
<REGION seq_beg="497" pdb_beg="497" seq_end="519" pdb_end="519" type="H"/>
<REGION seq_beg="520" pdb_beg="520" seq_end="528" pdb_end="528" type="F"/>
<REGION seq_beg="529" pdb_beg="529" seq_end="558" pdb_end="558" type="H"/>
<REGION seq_beg="559" pdb_beg="559" seq_end="563" pdb_end="563" type="2"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="593" pdb_end="593" type="2"/>
<REGION seq_beg="594" pdb_beg="594" seq_end="611" pdb_end="611" type="L"/>
<REGION seq_beg="612" pdb_beg="612" seq_end="620" pdb_end="620" type="2"/>
<REGION seq_beg="621" pdb_beg="621" seq_end="645" pdb_end="645" type="H"/>
<REGION seq_beg="646" pdb_beg="646" seq_end="656" pdb_end="656" type="1"/>
<REGION seq_beg="657" pdb_beg="657" seq_end="671" pdb_end="671" type="F"/>
<REGION seq_beg="672" pdb_beg="672" seq_end="692" pdb_end="692" type="1"/>
<REGION seq_beg="699" pdb_beg="699" seq_end="729" pdb_end="729" type="1"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
MTSASSPPAF RLETSDGDEE GNAEVNKGKQ EPPPMESPFQ REDRNSSPQI
KVNLNFIKRP PKNTSAPSQQ EPDRFDRDRL FSVVSRGVPE ELTGLLEYLR
WNSKYLTDSA YTEGSTGKTC LMKAVLNLQD GVNACIMPLL QIDKDSGNPK
LLVNAQCTDE FYQGHSALHI AIEKRSLQCV KLLVENGADV HLRACGRFFQ
KHQGTCFYFG ELPLSLAACT KQWDVVTYLL ENPHQPASLE ATDSLGNTVL
HALVMIADNS PENSALVIHM YDGLLQMGAR LCPTVQLEEI SNHQGLTPLK
LAAKEGKIEI FRHILQREFS GPYQPLSRKF TEWCYGPVRV SLYDLSSVDS
WEKNSVLEII AFHCKSPNRH RMVVLEPLNK LLQEKWDRLV SRFFFNFACY
LVYMFIFTVV AYHQPSLDQP AIPSSKATFG ESMLLLGHIL ILLGGIYLLL
GQLWYFWRRR LFIWISFMDS YFEILFLLQA LLTVLSQVLR FMETEWYLPL
LVLSLVLGWL NLLYYTRGFQ HTGIYSVMIQ KVILRDLLRF LLVYLVFLFG
FAVALVSLSR EARSPKAPED NNSTVTEQPT VGQEEEPAPY RSILDASLEL
FKFTIGMGEL AFQEQLRFRG VVLLLLLAYV LLTYVLLLNM LIALMSETVN
HVADNSWSIW KLQKAISVLE MENGYWWCRR KKHREGRLLK VGTRGDGTPD
ERWCFRVEEV NWAAWEKTLP TLSEDPSGPG ITGNKKNPTS KPGKNSASEE
DHLPLQVLQS P
</SEQ>
<REGION seq_beg="75" pdb_beg="75" seq_end="391" pdb_end="391" type="1"/>
<REGION seq_beg="392" pdb_beg="392" seq_end="413" pdb_end="413" type="H"/>
<REGION seq_beg="414" pdb_beg="414" seq_end="415" pdb_end="415" type="2"/>
<REGION seq_beg="429" pdb_beg="429" seq_end="433" pdb_end="433" type="2"/>
<REGION seq_beg="434" pdb_beg="434" seq_end="457" pdb_end="457" type="H"/>
<REGION seq_beg="458" pdb_beg="458" seq_end="470" pdb_end="470" type="1"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="492" pdb_end="492" type="H"/>
<REGION seq_beg="493" pdb_beg="493" seq_end="496" pdb_end="496" type="2"/>
<REGION seq_beg="497" pdb_beg="497" seq_end="519" pdb_end="519" type="H"/>
<REGION seq_beg="520" pdb_beg="520" seq_end="528" pdb_end="528" type="F"/>
<REGION seq_beg="529" pdb_beg="529" seq_end="558" pdb_end="558" type="H"/>
<REGION seq_beg="559" pdb_beg="559" seq_end="563" pdb_end="563" type="2"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="593" pdb_end="593" type="2"/>
<REGION seq_beg="594" pdb_beg="594" seq_end="611" pdb_end="611" type="L"/>
<REGION seq_beg="612" pdb_beg="612" seq_end="620" pdb_end="620" type="2"/>
<REGION seq_beg="621" pdb_beg="621" seq_end="645" pdb_end="645" type="H"/>
<REGION seq_beg="646" pdb_beg="646" seq_end="656" pdb_end="656" type="1"/>
<REGION seq_beg="657" pdb_beg="657" seq_end="671" pdb_end="671" type="F"/>
<REGION seq_beg="672" pdb_beg="672" seq_end="692" pdb_end="692" type="1"/>
<REGION seq_beg="699" pdb_beg="699" seq_end="729" pdb_end="729" type="1"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
MTSASSPPAF RLETSDGDEE GNAEVNKGKQ EPPPMESPFQ REDRNSSPQI
KVNLNFIKRP PKNTSAPSQQ EPDRFDRDRL FSVVSRGVPE ELTGLLEYLR
WNSKYLTDSA YTEGSTGKTC LMKAVLNLQD GVNACIMPLL QIDKDSGNPK
LLVNAQCTDE FYQGHSALHI AIEKRSLQCV KLLVENGADV HLRACGRFFQ
KHQGTCFYFG ELPLSLAACT KQWDVVTYLL ENPHQPASLE ATDSLGNTVL
HALVMIADNS PENSALVIHM YDGLLQMGAR LCPTVQLEEI SNHQGLTPLK
LAAKEGKIEI FRHILQREFS GPYQPLSRKF TEWCYGPVRV SLYDLSSVDS
WEKNSVLEII AFHCKSPNRH RMVVLEPLNK LLQEKWDRLV SRFFFNFACY
LVYMFIFTVV AYHQPSLDQP AIPSSKATFG ESMLLLGHIL ILLGGIYLLL
GQLWYFWRRR LFIWISFMDS YFEILFLLQA LLTVLSQVLR FMETEWYLPL
LVLSLVLGWL NLLYYTRGFQ HTGIYSVMIQ KVILRDLLRF LLVYLVFLFG
FAVALVSLSR EARSPKAPED NNSTVTEQPT VGQEEEPAPY RSILDASLEL
FKFTIGMGEL AFQEQLRFRG VVLLLLLAYV LLTYVLLLNM LIALMSETVN
HVADNSWSIW KLQKAISVLE MENGYWWCRR KKHREGRLLK VGTRGDGTPD
ERWCFRVEEV NWAAWEKTLP TLSEDPSGPG ITGNKKNPTS KPGKNSASEE
DHLPLQVLQS P
</SEQ>
<REGION seq_beg="75" pdb_beg="75" seq_end="391" pdb_end="391" type="1"/>
<REGION seq_beg="392" pdb_beg="392" seq_end="413" pdb_end="413" type="H"/>
<REGION seq_beg="414" pdb_beg="414" seq_end="415" pdb_end="415" type="2"/>
<REGION seq_beg="429" pdb_beg="429" seq_end="433" pdb_end="433" type="2"/>
<REGION seq_beg="434" pdb_beg="434" seq_end="457" pdb_end="457" type="H"/>
<REGION seq_beg="458" pdb_beg="458" seq_end="470" pdb_end="470" type="1"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="492" pdb_end="492" type="H"/>
<REGION seq_beg="493" pdb_beg="493" seq_end="496" pdb_end="496" type="2"/>
<REGION seq_beg="497" pdb_beg="497" seq_end="519" pdb_end="519" type="H"/>
<REGION seq_beg="520" pdb_beg="520" seq_end="528" pdb_end="528" type="F"/>
<REGION seq_beg="529" pdb_beg="529" seq_end="558" pdb_end="558" type="H"/>
<REGION seq_beg="559" pdb_beg="559" seq_end="563" pdb_end="563" type="2"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="593" pdb_end="593" type="2"/>
<REGION seq_beg="594" pdb_beg="594" seq_end="611" pdb_end="611" type="L"/>
<REGION seq_beg="612" pdb_beg="612" seq_end="620" pdb_end="620" type="2"/>
<REGION seq_beg="621" pdb_beg="621" seq_end="645" pdb_end="645" type="H"/>
<REGION seq_beg="646" pdb_beg="646" seq_end="656" pdb_end="656" type="1"/>
<REGION seq_beg="657" pdb_beg="657" seq_end="671" pdb_end="671" type="F"/>
<REGION seq_beg="672" pdb_beg="672" seq_end="692" pdb_end="692" type="1"/>
<REGION seq_beg="699" pdb_beg="699" seq_end="729" pdb_end="729" type="1"/>
</CHAIN>
</pdbtm>
Overview
6u88
PDB code:6u88
Chain(s):A[6], B[6], C[6], D[6]
PDBTM type:Tm_Alpha
Title:CBD-BOUND FULL-LENGTH RAT TRPV2 IN NANODISCS, STATE 2
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