PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2020-07-03
Number of transmembrane proteins: 5146 (alpha: 4654 , beta: 460 )
Content of 6pvl
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="6pvl" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2020-02-03</CREATE_DATE>
<MODIFICATION>
<DATE>2020-02-03</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>63.66</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="0.00255814" Y="-0.00328605" Z="15.25000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-116.59638977"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-116.60458374"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-91.74594116"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MNAHSKEMAP LMGKRTTAPG GNPVVLTEKR PADLTPTKKS AHFFLEIEGF
EPNPTVTKTS PPIFSKPMDS NIRQCLSGNC DDMDSPQSPQ DDVTETPSNP
NSPSANLAKE EQRQKKKRLK KRIFAAVSEG CVEELRELLQ DLQDLCRRRR
GLDVPDFLMH KLTASDTGKT CLMKALLNIN PNTKEIVRIL LAFAEENDIL
DRFINAEYTE EAYEGQTALN IAIERRQGDI TAVLIAAGAD VNAHAKGVFF
NPKYQHEGFY FGETPLALAA CTNQPEIVQL LMENEQTDIT SQDSRGNNIL
HALVTVAEDF KTQNDFVKRM YDMILLRSGN WELETMRNND GLTPLQLAAK
MGKAEILKYI LSREIKEKPL RSLSRKFTDW AYGPVSSSLY DLTNVDTTTD
NSVLEIIVYN TNIDNRHEML TLEPLHTLLH TKWKKFAKYM FFLSFCFYFF
YNITLTLVSY YRPREDEDLP HPLALTHKMS WLQLLGRMFV LIWATCISVK
EGIAIFLLRP SDLQSILSDA WFHFVFFVQA VLVILSVFLY LFAYKEYLAC
LVLAMALGWA NMLYYTRGFQ SMGMYSVMIQ KVILHDVLKF LFVYILFLLG
FGVALASLIE KCSKDKKDCS SYGSFSDAVL ELFKLTIGLG DLNIQQNSTY
PILFLFLLIT YVILTFVLLL NMLIALMGET VENVSKESER IWRLQRARTI
LEFEKMLPEW LRSRFRMGEL CKVADEDFRL CLRINEVKWT EWKTHVSFLN
EDPGPIRRTA DLNKIQDSSR SNSKTTLYAF DELDEFPETS VLVPRGSAAA
WSHPQFEK
</SEQ>
<REGION seq_beg="115" pdb_beg="115" seq_end="439" pdb_end="439" type="2"/>
<REGION seq_beg="440" pdb_beg="440" seq_end="460" pdb_end="460" type="H"/>
<REGION seq_beg="461" pdb_beg="461" seq_end="481" pdb_end="481" type="1"/>
<REGION seq_beg="482" pdb_beg="482" seq_end="506" pdb_end="506" type="H"/>
<REGION seq_beg="507" pdb_beg="507" seq_end="519" pdb_end="519" type="2"/>
<REGION seq_beg="520" pdb_beg="520" seq_end="539" pdb_end="539" type="H"/>
<REGION seq_beg="540" pdb_beg="540" seq_end="549" pdb_end="549" type="1"/>
<REGION seq_beg="550" pdb_beg="550" seq_end="567" pdb_end="567" type="H"/>
<REGION seq_beg="568" pdb_beg="568" seq_end="569" pdb_end="569" type="2"/>
<REGION seq_beg="570" pdb_beg="570" seq_end="575" pdb_end="575" type="F"/>
<REGION seq_beg="576" pdb_beg="576" seq_end="605" pdb_end="605" type="H"/>
<REGION seq_beg="606" pdb_beg="606" seq_end="628" pdb_end="628" type="1"/>
<REGION seq_beg="629" pdb_beg="629" seq_end="638" pdb_end="638" type="L"/>
<REGION seq_beg="639" pdb_beg="639" seq_end="653" pdb_end="653" type="1"/>
<REGION seq_beg="654" pdb_beg="654" seq_end="676" pdb_end="676" type="H"/>
<REGION seq_beg="677" pdb_beg="677" seq_end="682" pdb_end="682" type="2"/>
<REGION seq_beg="683" pdb_beg="683" seq_end="704" pdb_end="704" type="F"/>
<REGION seq_beg="705" pdb_beg="705" seq_end="758" pdb_end="758" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
MNAHSKEMAP LMGKRTTAPG GNPVVLTEKR PADLTPTKKS AHFFLEIEGF
EPNPTVTKTS PPIFSKPMDS NIRQCLSGNC DDMDSPQSPQ DDVTETPSNP
NSPSANLAKE EQRQKKKRLK KRIFAAVSEG CVEELRELLQ DLQDLCRRRR
GLDVPDFLMH KLTASDTGKT CLMKALLNIN PNTKEIVRIL LAFAEENDIL
DRFINAEYTE EAYEGQTALN IAIERRQGDI TAVLIAAGAD VNAHAKGVFF
NPKYQHEGFY FGETPLALAA CTNQPEIVQL LMENEQTDIT SQDSRGNNIL
HALVTVAEDF KTQNDFVKRM YDMILLRSGN WELETMRNND GLTPLQLAAK
MGKAEILKYI LSREIKEKPL RSLSRKFTDW AYGPVSSSLY DLTNVDTTTD
NSVLEIIVYN TNIDNRHEML TLEPLHTLLH TKWKKFAKYM FFLSFCFYFF
YNITLTLVSY YRPREDEDLP HPLALTHKMS WLQLLGRMFV LIWATCISVK
EGIAIFLLRP SDLQSILSDA WFHFVFFVQA VLVILSVFLY LFAYKEYLAC
LVLAMALGWA NMLYYTRGFQ SMGMYSVMIQ KVILHDVLKF LFVYILFLLG
FGVALASLIE KCSKDKKDCS SYGSFSDAVL ELFKLTIGLG DLNIQQNSTY
PILFLFLLIT YVILTFVLLL NMLIALMGET VENVSKESER IWRLQRARTI
LEFEKMLPEW LRSRFRMGEL CKVADEDFRL CLRINEVKWT EWKTHVSFLN
EDPGPIRRTA DLNKIQDSSR SNSKTTLYAF DELDEFPETS VLVPRGSAAA
WSHPQFEK
</SEQ>
<REGION seq_beg="115" pdb_beg="115" seq_end="439" pdb_end="439" type="2"/>
<REGION seq_beg="440" pdb_beg="440" seq_end="460" pdb_end="460" type="H"/>
<REGION seq_beg="461" pdb_beg="461" seq_end="481" pdb_end="481" type="1"/>
<REGION seq_beg="482" pdb_beg="482" seq_end="506" pdb_end="506" type="H"/>
<REGION seq_beg="507" pdb_beg="507" seq_end="519" pdb_end="519" type="2"/>
<REGION seq_beg="520" pdb_beg="520" seq_end="539" pdb_end="539" type="H"/>
<REGION seq_beg="540" pdb_beg="540" seq_end="549" pdb_end="549" type="1"/>
<REGION seq_beg="550" pdb_beg="550" seq_end="567" pdb_end="567" type="H"/>
<REGION seq_beg="568" pdb_beg="568" seq_end="569" pdb_end="569" type="2"/>
<REGION seq_beg="570" pdb_beg="570" seq_end="575" pdb_end="575" type="F"/>
<REGION seq_beg="576" pdb_beg="576" seq_end="605" pdb_end="605" type="H"/>
<REGION seq_beg="606" pdb_beg="606" seq_end="628" pdb_end="628" type="1"/>
<REGION seq_beg="629" pdb_beg="629" seq_end="638" pdb_end="638" type="L"/>
<REGION seq_beg="639" pdb_beg="639" seq_end="653" pdb_end="653" type="1"/>
<REGION seq_beg="654" pdb_beg="654" seq_end="676" pdb_end="676" type="H"/>
<REGION seq_beg="677" pdb_beg="677" seq_end="682" pdb_end="682" type="2"/>
<REGION seq_beg="683" pdb_beg="683" seq_end="704" pdb_end="704" type="F"/>
<REGION seq_beg="705" pdb_beg="705" seq_end="758" pdb_end="758" type="2"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
MNAHSKEMAP LMGKRTTAPG GNPVVLTEKR PADLTPTKKS AHFFLEIEGF
EPNPTVTKTS PPIFSKPMDS NIRQCLSGNC DDMDSPQSPQ DDVTETPSNP
NSPSANLAKE EQRQKKKRLK KRIFAAVSEG CVEELRELLQ DLQDLCRRRR
GLDVPDFLMH KLTASDTGKT CLMKALLNIN PNTKEIVRIL LAFAEENDIL
DRFINAEYTE EAYEGQTALN IAIERRQGDI TAVLIAAGAD VNAHAKGVFF
NPKYQHEGFY FGETPLALAA CTNQPEIVQL LMENEQTDIT SQDSRGNNIL
HALVTVAEDF KTQNDFVKRM YDMILLRSGN WELETMRNND GLTPLQLAAK
MGKAEILKYI LSREIKEKPL RSLSRKFTDW AYGPVSSSLY DLTNVDTTTD
NSVLEIIVYN TNIDNRHEML TLEPLHTLLH TKWKKFAKYM FFLSFCFYFF
YNITLTLVSY YRPREDEDLP HPLALTHKMS WLQLLGRMFV LIWATCISVK
EGIAIFLLRP SDLQSILSDA WFHFVFFVQA VLVILSVFLY LFAYKEYLAC
LVLAMALGWA NMLYYTRGFQ SMGMYSVMIQ KVILHDVLKF LFVYILFLLG
FGVALASLIE KCSKDKKDCS SYGSFSDAVL ELFKLTIGLG DLNIQQNSTY
PILFLFLLIT YVILTFVLLL NMLIALMGET VENVSKESER IWRLQRARTI
LEFEKMLPEW LRSRFRMGEL CKVADEDFRL CLRINEVKWT EWKTHVSFLN
EDPGPIRRTA DLNKIQDSSR SNSKTTLYAF DELDEFPETS VLVPRGSAAA
WSHPQFEK
</SEQ>
<REGION seq_beg="115" pdb_beg="115" seq_end="439" pdb_end="439" type="2"/>
<REGION seq_beg="440" pdb_beg="440" seq_end="460" pdb_end="460" type="H"/>
<REGION seq_beg="461" pdb_beg="461" seq_end="481" pdb_end="481" type="1"/>
<REGION seq_beg="482" pdb_beg="482" seq_end="506" pdb_end="506" type="H"/>
<REGION seq_beg="507" pdb_beg="507" seq_end="519" pdb_end="519" type="2"/>
<REGION seq_beg="520" pdb_beg="520" seq_end="539" pdb_end="539" type="H"/>
<REGION seq_beg="540" pdb_beg="540" seq_end="549" pdb_end="549" type="1"/>
<REGION seq_beg="550" pdb_beg="550" seq_end="567" pdb_end="567" type="H"/>
<REGION seq_beg="568" pdb_beg="568" seq_end="569" pdb_end="569" type="2"/>
<REGION seq_beg="570" pdb_beg="570" seq_end="575" pdb_end="575" type="F"/>
<REGION seq_beg="576" pdb_beg="576" seq_end="605" pdb_end="605" type="H"/>
<REGION seq_beg="606" pdb_beg="606" seq_end="628" pdb_end="628" type="1"/>
<REGION seq_beg="629" pdb_beg="629" seq_end="638" pdb_end="638" type="L"/>
<REGION seq_beg="639" pdb_beg="639" seq_end="653" pdb_end="653" type="1"/>
<REGION seq_beg="654" pdb_beg="654" seq_end="676" pdb_end="676" type="H"/>
<REGION seq_beg="677" pdb_beg="677" seq_end="682" pdb_end="682" type="2"/>
<REGION seq_beg="683" pdb_beg="683" seq_end="704" pdb_end="704" type="F"/>
<REGION seq_beg="705" pdb_beg="705" seq_end="758" pdb_end="758" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
MNAHSKEMAP LMGKRTTAPG GNPVVLTEKR PADLTPTKKS AHFFLEIEGF
EPNPTVTKTS PPIFSKPMDS NIRQCLSGNC DDMDSPQSPQ DDVTETPSNP
NSPSANLAKE EQRQKKKRLK KRIFAAVSEG CVEELRELLQ DLQDLCRRRR
GLDVPDFLMH KLTASDTGKT CLMKALLNIN PNTKEIVRIL LAFAEENDIL
DRFINAEYTE EAYEGQTALN IAIERRQGDI TAVLIAAGAD VNAHAKGVFF
NPKYQHEGFY FGETPLALAA CTNQPEIVQL LMENEQTDIT SQDSRGNNIL
HALVTVAEDF KTQNDFVKRM YDMILLRSGN WELETMRNND GLTPLQLAAK
MGKAEILKYI LSREIKEKPL RSLSRKFTDW AYGPVSSSLY DLTNVDTTTD
NSVLEIIVYN TNIDNRHEML TLEPLHTLLH TKWKKFAKYM FFLSFCFYFF
YNITLTLVSY YRPREDEDLP HPLALTHKMS WLQLLGRMFV LIWATCISVK
EGIAIFLLRP SDLQSILSDA WFHFVFFVQA VLVILSVFLY LFAYKEYLAC
LVLAMALGWA NMLYYTRGFQ SMGMYSVMIQ KVILHDVLKF LFVYILFLLG
FGVALASLIE KCSKDKKDCS SYGSFSDAVL ELFKLTIGLG DLNIQQNSTY
PILFLFLLIT YVILTFVLLL NMLIALMGET VENVSKESER IWRLQRARTI
LEFEKMLPEW LRSRFRMGEL CKVADEDFRL CLRINEVKWT EWKTHVSFLN
EDPGPIRRTA DLNKIQDSSR SNSKTTLYAF DELDEFPETS VLVPRGSAAA
WSHPQFEK
</SEQ>
<REGION seq_beg="115" pdb_beg="115" seq_end="439" pdb_end="439" type="2"/>
<REGION seq_beg="440" pdb_beg="440" seq_end="460" pdb_end="460" type="H"/>
<REGION seq_beg="461" pdb_beg="461" seq_end="481" pdb_end="481" type="1"/>
<REGION seq_beg="482" pdb_beg="482" seq_end="506" pdb_end="506" type="H"/>
<REGION seq_beg="507" pdb_beg="507" seq_end="519" pdb_end="519" type="2"/>
<REGION seq_beg="520" pdb_beg="520" seq_end="539" pdb_end="539" type="H"/>
<REGION seq_beg="540" pdb_beg="540" seq_end="549" pdb_end="549" type="1"/>
<REGION seq_beg="550" pdb_beg="550" seq_end="567" pdb_end="567" type="H"/>
<REGION seq_beg="568" pdb_beg="568" seq_end="569" pdb_end="569" type="2"/>
<REGION seq_beg="570" pdb_beg="570" seq_end="575" pdb_end="575" type="F"/>
<REGION seq_beg="576" pdb_beg="576" seq_end="605" pdb_end="605" type="H"/>
<REGION seq_beg="606" pdb_beg="606" seq_end="628" pdb_end="628" type="1"/>
<REGION seq_beg="629" pdb_beg="629" seq_end="638" pdb_end="638" type="L"/>
<REGION seq_beg="639" pdb_beg="639" seq_end="653" pdb_end="653" type="1"/>
<REGION seq_beg="654" pdb_beg="654" seq_end="676" pdb_end="676" type="H"/>
<REGION seq_beg="677" pdb_beg="677" seq_end="682" pdb_end="682" type="2"/>
<REGION seq_beg="683" pdb_beg="683" seq_end="704" pdb_end="704" type="F"/>
<REGION seq_beg="705" pdb_beg="705" seq_end="758" pdb_end="758" type="2"/>
</CHAIN>
</pdbtm>
Overview
6pvl
PDB code:6pvl
Chain(s):A[6], B[6], C[6], D[6]
PDBTM type:Tm_Alpha
Title:CRYO-EM STRUCTURE OF MOUSE TRPV3 IN CLOSED STATE AT 42 DEGREES CELSIUS
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