PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2020-07-03
Number of transmembrane proteins: 5146 (alpha: 4654 , beta: 460 )
Content of 6oo7
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="6oo7" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2020-01-07</CREATE_DATE>
<MODIFICATION>
<DATE>2020-01-07</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>75.37</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="-0.23594566" Y="-0.06276121" Z="14.99801350"/>
<TMATRIX>
<ROWX X="0.99987632" Y="-0.00006582" Z="0.01572957" T="-141.09861755"/>
<ROWY X="0.00000000" Y="0.99999124" Z="0.00418460" T="-138.98919678"/>
<ROWZ X="-0.01572971" Y="-0.00418408" Z="0.99986756" T="-115.50848389"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MTSPSSPPAF RLETSDGGQD GAEVDKAQLG YGAGPPPMES RFQDEDRNFP
PQIKVNLNYR KGAGASQPDL NRFDRDRLFN VVARGNPEDL AGLLEYLRRT
SKYLTDSEYT EGSTGKTCLM KAVLNLQDGV NACIQPLLEI DRDSGNPQPL
VNAQCTDEYY RGHSALHIAI EKRSLQCVKL LVENGANVHA KACGHFFQKN
QDTCFYFGEL PLSLAACTKQ WDVVNYLLEN PHQPASLQAQ DSLGNTVLHA
LVMIADDSAE NSALVVRMYD GLLQAGARLC PNVQLEGIPN LEGLTPLKLA
AKEGKIEIFK HILQREFSAP CQSLSRKFTE WCYGPVRVSL YDLASVDSWE
ENSVLEIIAF HSRSPHRHRM VVLEPLNKLL QAKWDRLIPR FCFNFLCYLV
YMLIFTAVAY HQPALEKQGF PPLKATAGNS MLLLGHILIL LGGVYLLLGQ
LWYFWRRRLF IWISFMDSYS EILFLLQALL TVLSQVLCFL AIEWYLPLLV
SSLAMGWTNL LYYTRGFQHT GIYSVMIEKV ILRDLLRFLL VYLVFLFGFA
VALVSLSREA QNSRTPAGPN ATEVGQPGAG QEDEAPPYRS ILDASLELFK
FTIGMGELAF QEQLRFRGVV LLLLLAYVLL TYVLLLNMLI ALMSETVNSV
ATDSWSIWKL QKAISVLEME NGYWWCRRKK QRAGVMLTVG TRPDGSPDER
WCFRVGEMNW ATWEQTLPRT LCEEPSGAAA PGVMKNPTPA SQRGEDSASE
EDHLPLQLLQ SRSNLEVLFQ GPHHHHHHDY KDDDDK
</SEQ>
<REGION seq_beg="73" pdb_beg="73" seq_end="390" pdb_end="390" type="2"/>
<REGION seq_beg="391" pdb_beg="391" seq_end="410" pdb_end="410" type="H"/>
<REGION seq_beg="411" pdb_beg="411" seq_end="412" pdb_end="412" type="1"/>
<REGION seq_beg="427" pdb_beg="427" seq_end="434" pdb_end="434" type="1"/>
<REGION seq_beg="435" pdb_beg="435" seq_end="455" pdb_end="455" type="H"/>
<REGION seq_beg="456" pdb_beg="456" seq_end="457" pdb_end="457" type="2"/>
<REGION seq_beg="458" pdb_beg="458" seq_end="464" pdb_end="464" type="F"/>
<REGION seq_beg="465" pdb_beg="465" seq_end="468" pdb_end="468" type="2"/>
<REGION seq_beg="469" pdb_beg="469" seq_end="488" pdb_end="488" type="H"/>
<REGION seq_beg="489" pdb_beg="489" seq_end="495" pdb_end="495" type="1"/>
<REGION seq_beg="496" pdb_beg="496" seq_end="514" pdb_end="514" type="H"/>
<REGION seq_beg="515" pdb_beg="515" seq_end="517" pdb_end="517" type="2"/>
<REGION seq_beg="518" pdb_beg="518" seq_end="530" pdb_end="530" type="F"/>
<REGION seq_beg="531" pdb_beg="531" seq_end="555" pdb_end="555" type="H"/>
<REGION seq_beg="556" pdb_beg="556" seq_end="557" pdb_end="557" type="1"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="594" pdb_end="594" type="1"/>
<REGION seq_beg="595" pdb_beg="595" seq_end="605" pdb_end="605" type="L"/>
<REGION seq_beg="606" pdb_beg="606" seq_end="606" pdb_end="606" type="1"/>
<REGION seq_beg="615" pdb_beg="615" seq_end="618" pdb_end="618" type="1"/>
<REGION seq_beg="619" pdb_beg="619" seq_end="640" pdb_end="640" type="H"/>
<REGION seq_beg="641" pdb_beg="641" seq_end="653" pdb_end="653" type="2"/>
<REGION seq_beg="654" pdb_beg="654" seq_end="671" pdb_end="671" type="F"/>
<REGION seq_beg="672" pdb_beg="672" seq_end="727" pdb_end="727" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
MTSPSSPPAF RLETSDGGQD GAEVDKAQLG YGAGPPPMES RFQDEDRNFP
PQIKVNLNYR KGAGASQPDL NRFDRDRLFN VVARGNPEDL AGLLEYLRRT
SKYLTDSEYT EGSTGKTCLM KAVLNLQDGV NACIQPLLEI DRDSGNPQPL
VNAQCTDEYY RGHSALHIAI EKRSLQCVKL LVENGANVHA KACGHFFQKN
QDTCFYFGEL PLSLAACTKQ WDVVNYLLEN PHQPASLQAQ DSLGNTVLHA
LVMIADDSAE NSALVVRMYD GLLQAGARLC PNVQLEGIPN LEGLTPLKLA
AKEGKIEIFK HILQREFSAP CQSLSRKFTE WCYGPVRVSL YDLASVDSWE
ENSVLEIIAF HSRSPHRHRM VVLEPLNKLL QAKWDRLIPR FCFNFLCYLV
YMLIFTAVAY HQPALEKQGF PPLKATAGNS MLLLGHILIL LGGVYLLLGQ
LWYFWRRRLF IWISFMDSYS EILFLLQALL TVLSQVLCFL AIEWYLPLLV
SSLAMGWTNL LYYTRGFQHT GIYSVMIEKV ILRDLLRFLL VYLVFLFGFA
VALVSLSREA QNSRTPAGPN ATEVGQPGAG QEDEAPPYRS ILDASLELFK
FTIGMGELAF QEQLRFRGVV LLLLLAYVLL TYVLLLNMLI ALMSETVNSV
ATDSWSIWKL QKAISVLEME NGYWWCRRKK QRAGVMLTVG TRPDGSPDER
WCFRVGEMNW ATWEQTLPRT LCEEPSGAAA PGVMKNPTPA SQRGEDSASE
EDHLPLQLLQ SRSNLEVLFQ GPHHHHHHDY KDDDDK
</SEQ>
<REGION seq_beg="74" pdb_beg="74" seq_end="390" pdb_end="390" type="2"/>
<REGION seq_beg="391" pdb_beg="391" seq_end="410" pdb_end="410" type="H"/>
<REGION seq_beg="411" pdb_beg="411" seq_end="412" pdb_end="412" type="1"/>
<REGION seq_beg="431" pdb_beg="431" seq_end="434" pdb_end="434" type="1"/>
<REGION seq_beg="435" pdb_beg="435" seq_end="455" pdb_end="455" type="H"/>
<REGION seq_beg="456" pdb_beg="456" seq_end="458" pdb_end="458" type="2"/>
<REGION seq_beg="459" pdb_beg="459" seq_end="464" pdb_end="464" type="F"/>
<REGION seq_beg="465" pdb_beg="465" seq_end="469" pdb_end="469" type="2"/>
<REGION seq_beg="470" pdb_beg="470" seq_end="489" pdb_end="489" type="H"/>
<REGION seq_beg="490" pdb_beg="490" seq_end="490" pdb_end="490" type="1"/>
<REGION seq_beg="493" pdb_beg="493" seq_end="494" pdb_end="494" type="1"/>
<REGION seq_beg="495" pdb_beg="495" seq_end="514" pdb_end="514" type="H"/>
<REGION seq_beg="515" pdb_beg="515" seq_end="517" pdb_end="517" type="2"/>
<REGION seq_beg="518" pdb_beg="518" seq_end="533" pdb_end="533" type="F"/>
<REGION seq_beg="534" pdb_beg="534" seq_end="534" pdb_end="534" type="2"/>
<REGION seq_beg="535" pdb_beg="535" seq_end="556" pdb_end="556" type="H"/>
<REGION seq_beg="557" pdb_beg="557" seq_end="557" pdb_end="557" type="1"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="591" pdb_end="591" type="1"/>
<REGION seq_beg="592" pdb_beg="592" seq_end="605" pdb_end="605" type="L"/>
<REGION seq_beg="606" pdb_beg="606" seq_end="607" pdb_end="607" type="1"/>
<REGION seq_beg="616" pdb_beg="616" seq_end="618" pdb_end="618" type="1"/>
<REGION seq_beg="619" pdb_beg="619" seq_end="640" pdb_end="640" type="H"/>
<REGION seq_beg="641" pdb_beg="641" seq_end="653" pdb_end="653" type="2"/>
<REGION seq_beg="654" pdb_beg="654" seq_end="671" pdb_end="671" type="F"/>
<REGION seq_beg="672" pdb_beg="672" seq_end="727" pdb_end="727" type="2"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
MTSPSSPPAF RLETSDGGQD GAEVDKAQLG YGAGPPPMES RFQDEDRNFP
PQIKVNLNYR KGAGASQPDL NRFDRDRLFN VVARGNPEDL AGLLEYLRRT
SKYLTDSEYT EGSTGKTCLM KAVLNLQDGV NACIQPLLEI DRDSGNPQPL
VNAQCTDEYY RGHSALHIAI EKRSLQCVKL LVENGANVHA KACGHFFQKN
QDTCFYFGEL PLSLAACTKQ WDVVNYLLEN PHQPASLQAQ DSLGNTVLHA
LVMIADDSAE NSALVVRMYD GLLQAGARLC PNVQLEGIPN LEGLTPLKLA
AKEGKIEIFK HILQREFSAP CQSLSRKFTE WCYGPVRVSL YDLASVDSWE
ENSVLEIIAF HSRSPHRHRM VVLEPLNKLL QAKWDRLIPR FCFNFLCYLV
YMLIFTAVAY HQPALEKQGF PPLKATAGNS MLLLGHILIL LGGVYLLLGQ
LWYFWRRRLF IWISFMDSYS EILFLLQALL TVLSQVLCFL AIEWYLPLLV
SSLAMGWTNL LYYTRGFQHT GIYSVMIEKV ILRDLLRFLL VYLVFLFGFA
VALVSLSREA QNSRTPAGPN ATEVGQPGAG QEDEAPPYRS ILDASLELFK
FTIGMGELAF QEQLRFRGVV LLLLLAYVLL TYVLLLNMLI ALMSETVNSV
ATDSWSIWKL QKAISVLEME NGYWWCRRKK QRAGVMLTVG TRPDGSPDER
WCFRVGEMNW ATWEQTLPRT LCEEPSGAAA PGVMKNPTPA SQRGEDSASE
EDHLPLQLLQ SRSNLEVLFQ GPHHHHHHDY KDDDDK
</SEQ>
<REGION seq_beg="73" pdb_beg="73" seq_end="392" pdb_end="392" type="2"/>
<REGION seq_beg="393" pdb_beg="393" seq_end="411" pdb_end="411" type="H"/>
<REGION seq_beg="412" pdb_beg="412" seq_end="412" pdb_end="412" type="1"/>
<REGION seq_beg="427" pdb_beg="427" seq_end="431" pdb_end="431" type="1"/>
<REGION seq_beg="432" pdb_beg="432" seq_end="452" pdb_end="452" type="H"/>
<REGION seq_beg="453" pdb_beg="453" seq_end="457" pdb_end="457" type="2"/>
<REGION seq_beg="458" pdb_beg="458" seq_end="464" pdb_end="464" type="F"/>
<REGION seq_beg="465" pdb_beg="465" seq_end="469" pdb_end="469" type="2"/>
<REGION seq_beg="470" pdb_beg="470" seq_end="490" pdb_end="490" type="H"/>
<REGION seq_beg="491" pdb_beg="491" seq_end="494" pdb_end="494" type="1"/>
<REGION seq_beg="495" pdb_beg="495" seq_end="514" pdb_end="514" type="H"/>
<REGION seq_beg="515" pdb_beg="515" seq_end="517" pdb_end="517" type="2"/>
<REGION seq_beg="518" pdb_beg="518" seq_end="534" pdb_end="534" type="F"/>
<REGION seq_beg="535" pdb_beg="535" seq_end="555" pdb_end="555" type="H"/>
<REGION seq_beg="556" pdb_beg="556" seq_end="557" pdb_end="557" type="1"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="594" pdb_end="594" type="1"/>
<REGION seq_beg="595" pdb_beg="595" seq_end="605" pdb_end="605" type="L"/>
<REGION seq_beg="606" pdb_beg="606" seq_end="606" pdb_end="606" type="1"/>
<REGION seq_beg="615" pdb_beg="615" seq_end="618" pdb_end="618" type="1"/>
<REGION seq_beg="619" pdb_beg="619" seq_end="640" pdb_end="640" type="H"/>
<REGION seq_beg="641" pdb_beg="641" seq_end="727" pdb_end="727" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
MTSPSSPPAF RLETSDGGQD GAEVDKAQLG YGAGPPPMES RFQDEDRNFP
PQIKVNLNYR KGAGASQPDL NRFDRDRLFN VVARGNPEDL AGLLEYLRRT
SKYLTDSEYT EGSTGKTCLM KAVLNLQDGV NACIQPLLEI DRDSGNPQPL
VNAQCTDEYY RGHSALHIAI EKRSLQCVKL LVENGANVHA KACGHFFQKN
QDTCFYFGEL PLSLAACTKQ WDVVNYLLEN PHQPASLQAQ DSLGNTVLHA
LVMIADDSAE NSALVVRMYD GLLQAGARLC PNVQLEGIPN LEGLTPLKLA
AKEGKIEIFK HILQREFSAP CQSLSRKFTE WCYGPVRVSL YDLASVDSWE
ENSVLEIIAF HSRSPHRHRM VVLEPLNKLL QAKWDRLIPR FCFNFLCYLV
YMLIFTAVAY HQPALEKQGF PPLKATAGNS MLLLGHILIL LGGVYLLLGQ
LWYFWRRRLF IWISFMDSYS EILFLLQALL TVLSQVLCFL AIEWYLPLLV
SSLAMGWTNL LYYTRGFQHT GIYSVMIEKV ILRDLLRFLL VYLVFLFGFA
VALVSLSREA QNSRTPAGPN ATEVGQPGAG QEDEAPPYRS ILDASLELFK
FTIGMGELAF QEQLRFRGVV LLLLLAYVLL TYVLLLNMLI ALMSETVNSV
ATDSWSIWKL QKAISVLEME NGYWWCRRKK QRAGVMLTVG TRPDGSPDER
WCFRVGEMNW ATWEQTLPRT LCEEPSGAAA PGVMKNPTPA SQRGEDSASE
EDHLPLQLLQ SRSNLEVLFQ GPHHHHHHDY KDDDDK
</SEQ>
<REGION seq_beg="74" pdb_beg="74" seq_end="391" pdb_end="391" type="2"/>
<REGION seq_beg="392" pdb_beg="392" seq_end="410" pdb_end="410" type="H"/>
<REGION seq_beg="411" pdb_beg="411" seq_end="412" pdb_end="412" type="1"/>
<REGION seq_beg="431" pdb_beg="431" seq_end="434" pdb_end="434" type="1"/>
<REGION seq_beg="435" pdb_beg="435" seq_end="456" pdb_end="456" type="H"/>
<REGION seq_beg="457" pdb_beg="457" seq_end="458" pdb_end="458" type="2"/>
<REGION seq_beg="459" pdb_beg="459" seq_end="464" pdb_end="464" type="F"/>
<REGION seq_beg="465" pdb_beg="465" seq_end="468" pdb_end="468" type="2"/>
<REGION seq_beg="469" pdb_beg="469" seq_end="488" pdb_end="488" type="H"/>
<REGION seq_beg="489" pdb_beg="489" seq_end="490" pdb_end="490" type="1"/>
<REGION seq_beg="493" pdb_beg="493" seq_end="495" pdb_end="495" type="1"/>
<REGION seq_beg="496" pdb_beg="496" seq_end="514" pdb_end="514" type="H"/>
<REGION seq_beg="515" pdb_beg="515" seq_end="517" pdb_end="517" type="2"/>
<REGION seq_beg="518" pdb_beg="518" seq_end="533" pdb_end="533" type="F"/>
<REGION seq_beg="534" pdb_beg="534" seq_end="534" pdb_end="534" type="2"/>
<REGION seq_beg="535" pdb_beg="535" seq_end="553" pdb_end="553" type="H"/>
<REGION seq_beg="554" pdb_beg="554" seq_end="557" pdb_end="557" type="1"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="594" pdb_end="594" type="1"/>
<REGION seq_beg="595" pdb_beg="595" seq_end="605" pdb_end="605" type="L"/>
<REGION seq_beg="606" pdb_beg="606" seq_end="607" pdb_end="607" type="1"/>
<REGION seq_beg="616" pdb_beg="616" seq_end="618" pdb_end="618" type="1"/>
<REGION seq_beg="619" pdb_beg="619" seq_end="640" pdb_end="640" type="H"/>
<REGION seq_beg="641" pdb_beg="641" seq_end="653" pdb_end="653" type="2"/>
<REGION seq_beg="654" pdb_beg="654" seq_end="671" pdb_end="671" type="F"/>
<REGION seq_beg="672" pdb_beg="672" seq_end="727" pdb_end="727" type="2"/>
</CHAIN>
</pdbtm>
Overview
6oo7
PDB code:6oo7
Chain(s):A[6], B[6], C[6], D[6]
PDBTM type:Tm_Alpha
Title:CRYO-EM STRUCTURE OF THE C2-SYMMETRIC TRPV2/RTX COMPLEX IN NANODISCS
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