PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2020-09-18
Number of transmembrane proteins: 5373 (alpha: 4874 , beta: 462 )
Content of 6o1p
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="6o1p" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2019-12-17</CREATE_DATE>
<MODIFICATION>
<DATE>2019-12-17</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>63.62</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
<PDBKWORD>Membrane</PDBKWORD>
</RAWRES>
<MEMBRANE>
<NORMAL X="0.04131220" Y="-0.03314637" Z="16.74991608"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-135.74816895"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-135.72994995"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-169.86587524"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MGACPPKAKG PWAQLQKLLI SWPVGEQDWE QYRDRVNMLQ QERIRDSPLL
QAAKENDLRL LKILLLNQSC DFQQRGAVGE TALHVAALYD NLEAATLLME
AAPELAKEPA LCEPFVGQTA LHIAVMNQNL NLVRALLARG ASVSARATGA
AFRRSPHNLI YYGEHPLSFA ACVGSEEIVR LLIEHGADIR AQDSLGNTVL
HILILQPNKT FACQMYNLLL SYDEHSDHLQ SLELVPNHQG LTPFKLAGVE
GNTVMFQHLM QKRKHVQWTC GPLTSTLYDL TEIDSWGEEL SFLELVVSSK
KREARQILEQ TPVKELVSFK WKKYGRPYFC VLASLYILYM ICFTTCCIYR
PLKLRDDNRT DPRDITILQQ KLLQEAYVTH QDNIRLVGEL VTVTGAVIIL
LLEIPDIFRV GASRYFGQTI LGGPFHVIII TYASLVLLTM VMRLTNMNGE
VVPLSFALVL GWCSVMYFAR GFQMLGPFTI MIQKMIFGDL MRFCWLMAVV
ILGFASAFHI TFQTEDPNNL GEFSDYPTAL FSTFELFLTI IDGPANYSVD
LPFMYCITYA AFAIIATLLM LNLFIAMMGD THWRVAQERD ELWRAQVVAT
TVMLERKMPR FLWPRSGICG YEYGLGDRWF LRVENHHDQN PLRVLRYVEA
FKCSDKEDGQ EQLSEKRPST VESGMLSRAS VAFQTPSLSR TTSQSSNSHR
GWEILRRNTL GHLNLGLDLG EGDGEEVYHF
</SEQ>
<REGION seq_beg="27" pdb_beg="27" seq_end="327" pdb_end="327" type="1"/>
<REGION seq_beg="328" pdb_beg="328" seq_end="350" pdb_end="350" type="H"/>
<REGION seq_beg="351" pdb_beg="351" seq_end="383" pdb_end="383" type="2"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="408" pdb_end="408" type="H"/>
<REGION seq_beg="409" pdb_beg="409" seq_end="422" pdb_end="422" type="1"/>
<REGION seq_beg="423" pdb_beg="423" seq_end="444" pdb_end="444" type="H"/>
<REGION seq_beg="445" pdb_beg="445" seq_end="449" pdb_end="449" type="2"/>
<REGION seq_beg="450" pdb_beg="450" seq_end="470" pdb_end="470" type="H"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="472" pdb_end="472" type="1"/>
<REGION seq_beg="473" pdb_beg="473" seq_end="478" pdb_end="478" type="F"/>
<REGION seq_beg="479" pdb_beg="479" seq_end="511" pdb_end="511" type="H"/>
<REGION seq_beg="512" pdb_beg="512" seq_end="525" pdb_end="525" type="2"/>
<REGION seq_beg="526" pdb_beg="526" seq_end="545" pdb_end="545" type="L"/>
<REGION seq_beg="546" pdb_beg="546" seq_end="553" pdb_end="553" type="2"/>
<REGION seq_beg="554" pdb_beg="554" seq_end="579" pdb_end="579" type="H"/>
<REGION seq_beg="580" pdb_beg="580" seq_end="586" pdb_end="586" type="1"/>
<REGION seq_beg="587" pdb_beg="587" seq_end="607" pdb_end="607" type="F"/>
<REGION seq_beg="608" pdb_beg="608" seq_end="638" pdb_end="638" type="1"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
MGACPPKAKG PWAQLQKLLI SWPVGEQDWE QYRDRVNMLQ QERIRDSPLL
QAAKENDLRL LKILLLNQSC DFQQRGAVGE TALHVAALYD NLEAATLLME
AAPELAKEPA LCEPFVGQTA LHIAVMNQNL NLVRALLARG ASVSARATGA
AFRRSPHNLI YYGEHPLSFA ACVGSEEIVR LLIEHGADIR AQDSLGNTVL
HILILQPNKT FACQMYNLLL SYDEHSDHLQ SLELVPNHQG LTPFKLAGVE
GNTVMFQHLM QKRKHVQWTC GPLTSTLYDL TEIDSWGEEL SFLELVVSSK
KREARQILEQ TPVKELVSFK WKKYGRPYFC VLASLYILYM ICFTTCCIYR
PLKLRDDNRT DPRDITILQQ KLLQEAYVTH QDNIRLVGEL VTVTGAVIIL
LLEIPDIFRV GASRYFGQTI LGGPFHVIII TYASLVLLTM VMRLTNMNGE
VVPLSFALVL GWCSVMYFAR GFQMLGPFTI MIQKMIFGDL MRFCWLMAVV
ILGFASAFHI TFQTEDPNNL GEFSDYPTAL FSTFELFLTI IDGPANYSVD
LPFMYCITYA AFAIIATLLM LNLFIAMMGD THWRVAQERD ELWRAQVVAT
TVMLERKMPR FLWPRSGICG YEYGLGDRWF LRVENHHDQN PLRVLRYVEA
FKCSDKEDGQ EQLSEKRPST VESGMLSRAS VAFQTPSLSR TTSQSSNSHR
GWEILRRNTL GHLNLGLDLG EGDGEEVYHF
</SEQ>
<REGION seq_beg="27" pdb_beg="27" seq_end="327" pdb_end="327" type="1"/>
<REGION seq_beg="328" pdb_beg="328" seq_end="350" pdb_end="350" type="H"/>
<REGION seq_beg="351" pdb_beg="351" seq_end="383" pdb_end="383" type="2"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="408" pdb_end="408" type="H"/>
<REGION seq_beg="409" pdb_beg="409" seq_end="422" pdb_end="422" type="1"/>
<REGION seq_beg="423" pdb_beg="423" seq_end="445" pdb_end="445" type="H"/>
<REGION seq_beg="446" pdb_beg="446" seq_end="449" pdb_end="449" type="2"/>
<REGION seq_beg="450" pdb_beg="450" seq_end="470" pdb_end="470" type="H"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="472" pdb_end="472" type="1"/>
<REGION seq_beg="473" pdb_beg="473" seq_end="478" pdb_end="478" type="F"/>
<REGION seq_beg="479" pdb_beg="479" seq_end="512" pdb_end="512" type="H"/>
<REGION seq_beg="513" pdb_beg="513" seq_end="525" pdb_end="525" type="2"/>
<REGION seq_beg="526" pdb_beg="526" seq_end="545" pdb_end="545" type="L"/>
<REGION seq_beg="546" pdb_beg="546" seq_end="552" pdb_end="552" type="2"/>
<REGION seq_beg="553" pdb_beg="553" seq_end="579" pdb_end="579" type="H"/>
<REGION seq_beg="580" pdb_beg="580" seq_end="586" pdb_end="586" type="1"/>
<REGION seq_beg="587" pdb_beg="587" seq_end="607" pdb_end="607" type="F"/>
<REGION seq_beg="608" pdb_beg="608" seq_end="638" pdb_end="638" type="1"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
MGACPPKAKG PWAQLQKLLI SWPVGEQDWE QYRDRVNMLQ QERIRDSPLL
QAAKENDLRL LKILLLNQSC DFQQRGAVGE TALHVAALYD NLEAATLLME
AAPELAKEPA LCEPFVGQTA LHIAVMNQNL NLVRALLARG ASVSARATGA
AFRRSPHNLI YYGEHPLSFA ACVGSEEIVR LLIEHGADIR AQDSLGNTVL
HILILQPNKT FACQMYNLLL SYDEHSDHLQ SLELVPNHQG LTPFKLAGVE
GNTVMFQHLM QKRKHVQWTC GPLTSTLYDL TEIDSWGEEL SFLELVVSSK
KREARQILEQ TPVKELVSFK WKKYGRPYFC VLASLYILYM ICFTTCCIYR
PLKLRDDNRT DPRDITILQQ KLLQEAYVTH QDNIRLVGEL VTVTGAVIIL
LLEIPDIFRV GASRYFGQTI LGGPFHVIII TYASLVLLTM VMRLTNMNGE
VVPLSFALVL GWCSVMYFAR GFQMLGPFTI MIQKMIFGDL MRFCWLMAVV
ILGFASAFHI TFQTEDPNNL GEFSDYPTAL FSTFELFLTI IDGPANYSVD
LPFMYCITYA AFAIIATLLM LNLFIAMMGD THWRVAQERD ELWRAQVVAT
TVMLERKMPR FLWPRSGICG YEYGLGDRWF LRVENHHDQN PLRVLRYVEA
FKCSDKEDGQ EQLSEKRPST VESGMLSRAS VAFQTPSLSR TTSQSSNSHR
GWEILRRNTL GHLNLGLDLG EGDGEEVYHF
</SEQ>
<REGION seq_beg="27" pdb_beg="27" seq_end="327" pdb_end="327" type="1"/>
<REGION seq_beg="328" pdb_beg="328" seq_end="350" pdb_end="350" type="H"/>
<REGION seq_beg="351" pdb_beg="351" seq_end="383" pdb_end="383" type="2"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="408" pdb_end="408" type="H"/>
<REGION seq_beg="409" pdb_beg="409" seq_end="422" pdb_end="422" type="1"/>
<REGION seq_beg="423" pdb_beg="423" seq_end="444" pdb_end="444" type="H"/>
<REGION seq_beg="445" pdb_beg="445" seq_end="449" pdb_end="449" type="2"/>
<REGION seq_beg="450" pdb_beg="450" seq_end="470" pdb_end="470" type="H"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="472" pdb_end="472" type="1"/>
<REGION seq_beg="473" pdb_beg="473" seq_end="478" pdb_end="478" type="F"/>
<REGION seq_beg="479" pdb_beg="479" seq_end="512" pdb_end="512" type="H"/>
<REGION seq_beg="513" pdb_beg="513" seq_end="525" pdb_end="525" type="2"/>
<REGION seq_beg="526" pdb_beg="526" seq_end="545" pdb_end="545" type="L"/>
<REGION seq_beg="546" pdb_beg="546" seq_end="552" pdb_end="552" type="2"/>
<REGION seq_beg="553" pdb_beg="553" seq_end="579" pdb_end="579" type="H"/>
<REGION seq_beg="580" pdb_beg="580" seq_end="586" pdb_end="586" type="1"/>
<REGION seq_beg="587" pdb_beg="587" seq_end="607" pdb_end="607" type="F"/>
<REGION seq_beg="608" pdb_beg="608" seq_end="638" pdb_end="638" type="1"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
MGACPPKAKG PWAQLQKLLI SWPVGEQDWE QYRDRVNMLQ QERIRDSPLL
QAAKENDLRL LKILLLNQSC DFQQRGAVGE TALHVAALYD NLEAATLLME
AAPELAKEPA LCEPFVGQTA LHIAVMNQNL NLVRALLARG ASVSARATGA
AFRRSPHNLI YYGEHPLSFA ACVGSEEIVR LLIEHGADIR AQDSLGNTVL
HILILQPNKT FACQMYNLLL SYDEHSDHLQ SLELVPNHQG LTPFKLAGVE
GNTVMFQHLM QKRKHVQWTC GPLTSTLYDL TEIDSWGEEL SFLELVVSSK
KREARQILEQ TPVKELVSFK WKKYGRPYFC VLASLYILYM ICFTTCCIYR
PLKLRDDNRT DPRDITILQQ KLLQEAYVTH QDNIRLVGEL VTVTGAVIIL
LLEIPDIFRV GASRYFGQTI LGGPFHVIII TYASLVLLTM VMRLTNMNGE
VVPLSFALVL GWCSVMYFAR GFQMLGPFTI MIQKMIFGDL MRFCWLMAVV
ILGFASAFHI TFQTEDPNNL GEFSDYPTAL FSTFELFLTI IDGPANYSVD
LPFMYCITYA AFAIIATLLM LNLFIAMMGD THWRVAQERD ELWRAQVVAT
TVMLERKMPR FLWPRSGICG YEYGLGDRWF LRVENHHDQN PLRVLRYVEA
FKCSDKEDGQ EQLSEKRPST VESGMLSRAS VAFQTPSLSR TTSQSSNSHR
GWEILRRNTL GHLNLGLDLG EGDGEEVYHF
</SEQ>
<REGION seq_beg="27" pdb_beg="27" seq_end="327" pdb_end="327" type="1"/>
<REGION seq_beg="328" pdb_beg="328" seq_end="350" pdb_end="350" type="H"/>
<REGION seq_beg="351" pdb_beg="351" seq_end="383" pdb_end="383" type="2"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="408" pdb_end="408" type="H"/>
<REGION seq_beg="409" pdb_beg="409" seq_end="422" pdb_end="422" type="1"/>
<REGION seq_beg="423" pdb_beg="423" seq_end="444" pdb_end="444" type="H"/>
<REGION seq_beg="445" pdb_beg="445" seq_end="449" pdb_end="449" type="2"/>
<REGION seq_beg="450" pdb_beg="450" seq_end="470" pdb_end="470" type="H"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="472" pdb_end="472" type="1"/>
<REGION seq_beg="473" pdb_beg="473" seq_end="478" pdb_end="478" type="F"/>
<REGION seq_beg="479" pdb_beg="479" seq_end="511" pdb_end="511" type="H"/>
<REGION seq_beg="512" pdb_beg="512" seq_end="525" pdb_end="525" type="2"/>
<REGION seq_beg="526" pdb_beg="526" seq_end="545" pdb_end="545" type="L"/>
<REGION seq_beg="546" pdb_beg="546" seq_end="553" pdb_end="553" type="2"/>
<REGION seq_beg="554" pdb_beg="554" seq_end="579" pdb_end="579" type="H"/>
<REGION seq_beg="580" pdb_beg="580" seq_end="586" pdb_end="586" type="1"/>
<REGION seq_beg="587" pdb_beg="587" seq_end="607" pdb_end="607" type="F"/>
<REGION seq_beg="608" pdb_beg="608" seq_end="638" pdb_end="638" type="1"/>
</CHAIN>
</pdbtm>
Overview
6o1p
PDB code:6o1p
Chain(s):A[6], B[6], C[6], D[6]
PDBTM type:Tm_Alpha
Title:CRYO-EM STRUCTURE OF FULL LENGTH TRPV5 IN NANODISC
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