PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2020-07-03
Number of transmembrane proteins: 5146 (alpha: 4654 , beta: 460 )
Content of 6n4q
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="6n4q" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2019-07-23</CREATE_DATE>
<MODIFICATION>
<DATE>2019-07-23</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>70.60</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
<PDBKWORD>Membrane</PDBKWORD>
</RAWRES>
<MEMBRANE>
<NORMAL X="-0.07867174" Y="0.13501988" Z="13.99912834"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-216.28523254"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-216.32925415"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-243.11499023"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MDYKDDDDKG SLVPRGSHMY LRITNIVESS FFTKFIIYLI VLNTLFMAME
HHPMTEEFKN VLAIGNLVFT GIFAIEIILR IYVHRISFFK DPWSLFDSLI
VTLSLVELFL ADVEGLSVLR SFRLLRVFRL VTAVPQMRKI VSALISVIPG
MLSVIALMTL FFYIFAIMAT QLFGERFPEW FGTLGESFYT LFQVMTLESW
SMGIVRPLME VYPYAWVFFI PFIFVVTFVM INLVVAICVD AMAILNQKEE
QHIIDEVQSH EDNINNEIIK LREEIVELKE LIKTSLKN
</SEQ>
<REGION seq_beg="17" pdb_beg="720" seq_end="17" pdb_end="720" type="2"/>
<REGION seq_beg="18" pdb_beg="721" seq_end="26" pdb_end="729" type="F"/>
<REGION seq_beg="27" pdb_beg="730" seq_end="31" pdb_end="734" type="2"/>
<REGION seq_beg="32" pdb_beg="735" seq_end="49" pdb_end="752" type="H"/>
<REGION seq_beg="50" pdb_beg="753" seq_end="64" pdb_end="767" type="1"/>
<REGION seq_beg="65" pdb_beg="768" seq_end="82" pdb_end="785" type="H"/>
<REGION seq_beg="83" pdb_beg="786" seq_end="92" pdb_end="795" type="2"/>
<REGION seq_beg="93" pdb_beg="796" seq_end="110" pdb_end="813" type="H"/>
<REGION seq_beg="111" pdb_beg="814" seq_end="118" pdb_end="821" type="1"/>
<REGION seq_beg="119" pdb_beg="822" seq_end="138" pdb_end="841" type="H"/>
<REGION seq_beg="139" pdb_beg="842" seq_end="150" pdb_end="853" type="F"/>
<REGION seq_beg="151" pdb_beg="854" seq_end="151" pdb_end="854" type="2"/>
<REGION seq_beg="152" pdb_beg="855" seq_end="170" pdb_end="873" type="H"/>
<REGION seq_beg="171" pdb_beg="874" seq_end="184" pdb_end="887" type="1"/>
<REGION seq_beg="185" pdb_beg="888" seq_end="201" pdb_end="904" type="L"/>
<REGION seq_beg="202" pdb_beg="905" seq_end="215" pdb_end="918" type="1"/>
<REGION seq_beg="216" pdb_beg="919" seq_end="235" pdb_end="938" type="H"/>
<REGION seq_beg="236" pdb_beg="939" seq_end="277" pdb_end="980" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
MDYKDDDDKG SLVPRGSHMY LRITNIVESS FFTKFIIYLI VLNTLFMAME
HHPMTEEFKN VLAIGNLVFT GIFAIEIILR IYVHRISFFK DPWSLFDSLI
VTLSLVELFL ADVEGLSVLR SFRLLRVFRL VTAVPQMRKI VSALISVIPG
MLSVIALMTL FFYIFAIMAT QLFGERFPEW FGTLGESFYT LFQVMTLESW
SMGIVRPLME VYPYAWVFFI PFIFVVTFVM INLVVAICVD AMAILNQKEE
QHIIDEVQSH EDNINNEIIK LREEIVELKE LIKTSLKN
</SEQ>
<REGION seq_beg="17" pdb_beg="720" seq_end="17" pdb_end="720" type="2"/>
<REGION seq_beg="18" pdb_beg="721" seq_end="27" pdb_end="730" type="F"/>
<REGION seq_beg="28" pdb_beg="731" seq_end="31" pdb_end="734" type="2"/>
<REGION seq_beg="32" pdb_beg="735" seq_end="49" pdb_end="752" type="H"/>
<REGION seq_beg="50" pdb_beg="753" seq_end="64" pdb_end="767" type="1"/>
<REGION seq_beg="65" pdb_beg="768" seq_end="82" pdb_end="785" type="H"/>
<REGION seq_beg="83" pdb_beg="786" seq_end="92" pdb_end="795" type="2"/>
<REGION seq_beg="93" pdb_beg="796" seq_end="110" pdb_end="813" type="H"/>
<REGION seq_beg="111" pdb_beg="814" seq_end="118" pdb_end="821" type="1"/>
<REGION seq_beg="119" pdb_beg="822" seq_end="138" pdb_end="841" type="H"/>
<REGION seq_beg="139" pdb_beg="842" seq_end="145" pdb_end="848" type="F"/>
<REGION seq_beg="146" pdb_beg="849" seq_end="151" pdb_end="854" type="2"/>
<REGION seq_beg="152" pdb_beg="855" seq_end="170" pdb_end="873" type="H"/>
<REGION seq_beg="171" pdb_beg="874" seq_end="187" pdb_end="890" type="1"/>
<REGION seq_beg="188" pdb_beg="891" seq_end="201" pdb_end="904" type="L"/>
<REGION seq_beg="202" pdb_beg="905" seq_end="215" pdb_end="918" type="1"/>
<REGION seq_beg="216" pdb_beg="919" seq_end="235" pdb_end="938" type="H"/>
<REGION seq_beg="236" pdb_beg="939" seq_end="278" pdb_end="981" type="2"/>
</CHAIN>
<CHAIN CHAINID="E" NUM_TM="0" TYPE="non_tm">
<SEQ>
YCQKWMWTCD SERKCCEGMV CRLWCKKKLW
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="30" pdb_end="30" type="1"/>
</CHAIN>
<CHAIN CHAINID="F" NUM_TM="0" TYPE="non_tm">
<SEQ>
YCQKWMWTCD SERKCCEGMV CRLWCKKKLW
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="30" pdb_end="30" type="1"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
MDYKDDDDKG SLVPRGSHMY LRITNIVESS FFTKFIIYLI VLNTLFMAME
HHPMTEEFKN VLAIGNLVFT GIFAIEIILR IYVHRISFFK DPWSLFDSLI
VTLSLVELFL ADVEGLSVLR SFRLLRVFRL VTAVPQMRKI VSALISVIPG
MLSVIALMTL FFYIFAIMAT QLFGERFPEW FGTLGESFYT LFQVMTLESW
SMGIVRPLME VYPYAWVFFI PFIFVVTFVM INLVVAICVD AMAILNQKEE
QHIIDEVQSH EDNINNEIIK LREEIVELKE LIKTSLKN
</SEQ>
<REGION seq_beg="17" pdb_beg="720" seq_end="17" pdb_end="720" type="2"/>
<REGION seq_beg="18" pdb_beg="721" seq_end="26" pdb_end="729" type="F"/>
<REGION seq_beg="27" pdb_beg="730" seq_end="31" pdb_end="734" type="2"/>
<REGION seq_beg="32" pdb_beg="735" seq_end="49" pdb_end="752" type="H"/>
<REGION seq_beg="50" pdb_beg="753" seq_end="64" pdb_end="767" type="1"/>
<REGION seq_beg="65" pdb_beg="768" seq_end="82" pdb_end="785" type="H"/>
<REGION seq_beg="83" pdb_beg="786" seq_end="92" pdb_end="795" type="2"/>
<REGION seq_beg="93" pdb_beg="796" seq_end="110" pdb_end="813" type="H"/>
<REGION seq_beg="111" pdb_beg="814" seq_end="118" pdb_end="821" type="1"/>
<REGION seq_beg="119" pdb_beg="822" seq_end="138" pdb_end="841" type="H"/>
<REGION seq_beg="139" pdb_beg="842" seq_end="150" pdb_end="853" type="F"/>
<REGION seq_beg="151" pdb_beg="854" seq_end="151" pdb_end="854" type="2"/>
<REGION seq_beg="152" pdb_beg="855" seq_end="172" pdb_end="875" type="H"/>
<REGION seq_beg="173" pdb_beg="876" seq_end="184" pdb_end="887" type="1"/>
<REGION seq_beg="185" pdb_beg="888" seq_end="201" pdb_end="904" type="L"/>
<REGION seq_beg="202" pdb_beg="905" seq_end="215" pdb_end="918" type="1"/>
<REGION seq_beg="216" pdb_beg="919" seq_end="235" pdb_end="938" type="H"/>
<REGION seq_beg="236" pdb_beg="939" seq_end="277" pdb_end="980" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
MDYKDDDDKG SLVPRGSHMY LRITNIVESS FFTKFIIYLI VLNTLFMAME
HHPMTEEFKN VLAIGNLVFT GIFAIEIILR IYVHRISFFK DPWSLFDSLI
VTLSLVELFL ADVEGLSVLR SFRLLRVFRL VTAVPQMRKI VSALISVIPG
MLSVIALMTL FFYIFAIMAT QLFGERFPEW FGTLGESFYT LFQVMTLESW
SMGIVRPLME VYPYAWVFFI PFIFVVTFVM INLVVAICVD AMAILNQKEE
QHIIDEVQSH EDNINNEIIK LREEIVELKE LIKTSLKN
</SEQ>
<REGION seq_beg="17" pdb_beg="720" seq_end="17" pdb_end="720" type="2"/>
<REGION seq_beg="18" pdb_beg="721" seq_end="27" pdb_end="730" type="F"/>
<REGION seq_beg="28" pdb_beg="731" seq_end="31" pdb_end="734" type="2"/>
<REGION seq_beg="32" pdb_beg="735" seq_end="49" pdb_end="752" type="H"/>
<REGION seq_beg="50" pdb_beg="753" seq_end="62" pdb_end="765" type="1"/>
<REGION seq_beg="63" pdb_beg="766" seq_end="82" pdb_end="785" type="H"/>
<REGION seq_beg="83" pdb_beg="786" seq_end="92" pdb_end="795" type="2"/>
<REGION seq_beg="93" pdb_beg="796" seq_end="110" pdb_end="813" type="H"/>
<REGION seq_beg="111" pdb_beg="814" seq_end="118" pdb_end="821" type="1"/>
<REGION seq_beg="119" pdb_beg="822" seq_end="135" pdb_end="838" type="H"/>
<REGION seq_beg="136" pdb_beg="839" seq_end="145" pdb_end="848" type="F"/>
<REGION seq_beg="146" pdb_beg="849" seq_end="151" pdb_end="854" type="2"/>
<REGION seq_beg="152" pdb_beg="855" seq_end="170" pdb_end="873" type="H"/>
<REGION seq_beg="171" pdb_beg="874" seq_end="187" pdb_end="890" type="1"/>
<REGION seq_beg="188" pdb_beg="891" seq_end="201" pdb_end="904" type="L"/>
<REGION seq_beg="202" pdb_beg="905" seq_end="216" pdb_end="919" type="1"/>
<REGION seq_beg="217" pdb_beg="920" seq_end="235" pdb_end="938" type="H"/>
<REGION seq_beg="236" pdb_beg="939" seq_end="278" pdb_end="981" type="2"/>
</CHAIN>
<CHAIN CHAINID="G" NUM_TM="0" TYPE="non_tm">
<SEQ>
YCQKWMWTCD SERKCCEGMV CRLWCKKKLW
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="30" pdb_end="30" type="1"/>
</CHAIN>
<CHAIN CHAINID="H" NUM_TM="0" TYPE="non_tm">
<SEQ>
YCQKWMWTCD SERKCCEGMV CRLWCKKKLW
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="30" pdb_end="30" type="1"/>
</CHAIN>
<CHAIN CHAINID="I" NUM_TM="0" TYPE="non_tm">
<SEQ>
EIVLTQSPAL MAASPGEKVT ITCSVSLSIS SSNLFWYQQK SETSPKPWIY
GTSKLASGVP VRFSGSGSGT SYSLTISSME AEDAATYYCQ QWSSHSFTFG
GGTKLEIKRA DAAPTVSIFP PSSEQLTSGG ASVVCFLNNF YPKDINVKWK
IDGSERQNGV LNSWTDQDSK DSTYSMSSTL TLTKDEYERH NSYTCEATHK
TSTSPIVKSF NRNEC
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="215" pdb_end="215" type="1"/>
</CHAIN>
<CHAIN CHAINID="J" NUM_TM="0" TYPE="non_tm">
<SEQ>
EVQLVESGGG LVKPGGSLKL SCAASGFTFS NYAMSWVRQT PEKRLEWVAT
ISNGGRYTYY PDSVKGRFTI SRDNAKNSLY LQMSSLRSED TAMYYCARHL
YRYDVGGALD YWGQGTSVTV SSAKTTAPSV YPLAPVCGDT TGSSVTLGCL
VKGYFPEPVT LTWNSGSLSS GVHTFPAVLQ SDLYTLSSSV TVTSSTWPSQ
SITCNVAHPA SSTKVDKKIE PRGPTIKP
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="228" pdb_end="228" type="1"/>
</CHAIN>
<CHAIN CHAINID="K" NUM_TM="0" TYPE="non_tm">
<SEQ>
EIVLTQSPAL MAASPGEKVT ITCSVSLSIS SSNLFWYQQK SETSPKPWIY
GTSKLASGVP VRFSGSGSGT SYSLTISSME AEDAATYYCQ QWSSHSFTFG
GGTKLEIKRA DAAPTVSIFP PSSEQLTSGG ASVVCFLNNF YPKDINVKWK
IDGSERQNGV LNSWTDQDSK DSTYSMSSTL TLTKDEYERH NSYTCEATHK
TSTSPIVKSF NRNEC
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="215" pdb_end="215" type="1"/>
</CHAIN>
<CHAIN CHAINID="L" NUM_TM="0" TYPE="non_tm">
<SEQ>
EVQLVESGGG LVKPGGSLKL SCAASGFTFS NYAMSWVRQT PEKRLEWVAT
ISNGGRYTYY PDSVKGRFTI SRDNAKNSLY LQMSSLRSED TAMYYCARHL
YRYDVGGALD YWGQGTSVTV SSAKTTAPSV YPLAPVCGDT TGSSVTLGCL
VKGYFPEPVT LTWNSGSLSS GVHTFPAVLQ SDLYTLSSSV TVTSSTWPSQ
SITCNVAHPA SSTKVDKKIE PRGPTIKP
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="228" pdb_end="228" type="1"/>
</CHAIN>
</pdbtm>
Overview
6n4q
PDB code:6n4q
Chain(s):A[6], B[6], E[0], F[0], C[6], D[6], G[0], H[0], I[0], J[0], K[0], L[0]
PDBTM type:Tm_Alpha
Title:CRYOEM STRUCTURE OF NAV1.7 VSD2 (ACTIVED STATE) IN COMPLEX WITH THE GATING MODIFIER TOXIN PROTX2
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