PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2020-09-18
Number of transmembrane proteins: 5373 (alpha: 4874 , beta: 462 )
Content of 6mjp
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="6mjp" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2019-12-02</CREATE_DATE>
<MODIFICATION>
<DATE>2019-12-02</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>65.93</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="0.00000008" Y="-0.00000011" Z="15.00000000"/>
<TMATRIX>
<ROWX X="0.70081693" Y="-0.21270220" Z="-0.68089175" T="-12.14116669"/>
<ROWY X="0.00000000" Y="0.95451051" Z="-0.29817733" T="13.02805996"/>
<ROWZ X="0.71334130" Y="0.20896772" Z="0.66893709" T="-66.44918823"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="0" TYPE="non_tm">
<SEQ>
MAILKAQHLA KSYKKRKVVS DVSLQVESGQ IVGLLGPNGA GKTTSFYMIV
GLVARDEGTI TIDDNDISIL PMHSRSRMGI GYLPQEASIF RKLSVEDNIM
AVLQTREELT HEERQDKLED LLEEFHIQHI RKSAGMALSG GERRRVEIAR
ALAANPQFIL LDQPFAGVDP ISVIDIKKII EHLRDRGLGV LITDHNVRET
LDVCEKAYIV SQGRLIAEGT PQDVLNNEQV KQVYLGEQFR L
</SEQ>
<REGION seq_beg="2" pdb_beg="2" seq_end="241" pdb_end="241" type="1"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="0" TYPE="non_tm">
<SEQ>
MAILKAQHLA KSYKKRKVVS DVSLQVESGQ IVGLLGPNGA GKTTSFYMIV
GLVARDEGTI TIDDNDISIL PMHSRSRMGI GYLPQEASIF RKLSVEDNIM
AVLQTREELT HEERQDKLED LLEEFHIQHI RKSAGMALSG GERRRVEIAR
ALAANPQFIL LDQPFAGVDP ISVIDIKKII EHLRDRGLGV LITDHNVRET
LDVCEKAYIV SQGRLIAEGT PQDVLNNEQV KQVYLGEQFR L
</SEQ>
<REGION seq_beg="2" pdb_beg="2" seq_end="241" pdb_end="241" type="1"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="1" TYPE="alpha">
<SEQ>
MSLSRIVYVL LLFIASWSLY YLLGQEQDSK IQVAPNLELP MFSGENLENI
SYDEQGIRNY VITSIHLDHY AKSGNTLFKA PILKVYREGT LQEWEITARR
GILSKDQVLT LYDDVLAKNL LPDSGFDTLT TSEMSIQLKS RDFWADKPVE
LRGPQFETHG QAMKGNFADH SAELYNQVQG RYETLTPLVP R
</SEQ>
<REGION seq_beg="2" pdb_beg="2" seq_end="2" pdb_end="2" type="1"/>
<REGION seq_beg="3" pdb_beg="3" seq_end="20" pdb_end="20" type="H"/>
<REGION seq_beg="21" pdb_beg="21" seq_end="175" pdb_end="175" type="2"/>
</CHAIN>
<CHAIN CHAINID="F" NUM_TM="6" TYPE="alpha">
<SEQ>
MIIVRYLIRE TIKSQFAIFF VLFLVFLSQK FIRVLADASD GEIPTSMILS
IVGLNMPAMG LLMLPLSLYI GILLTFGRLY AESEITVMNA TGIGNKFLIR
AALYLALITA SVAAFNALWL APWSQDKEAH LMEQFAAENS VDLLQKGHFQ
RSPDGSSVVF IDNIENRKLY NVFVAQLAPR DSILPSVMFS HSGDVKELSD
GRQIITLYDG TRYEGVPTRV DYMITNFDSY DGLIGQREVK SAERDWEALP
TLSLLNNADR RAQAELQWRI SLVVCIPLLT MLVVPLSAVN PRQGRFAKMG
PAILIYLTYF LALSATKSAI EDGSLPVIIG LWPINAALLL AALMVNTLDS
IPVRRFKDRW KQRKVA
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="11" pdb_end="11" type="1"/>
<REGION seq_beg="12" pdb_beg="12" seq_end="32" pdb_end="32" type="H"/>
<REGION seq_beg="33" pdb_beg="33" seq_end="37" pdb_end="37" type="2"/>
<REGION seq_beg="47" pdb_beg="47" seq_end="47" pdb_end="47" type="2"/>
<REGION seq_beg="48" pdb_beg="48" seq_end="55" pdb_end="55" type="F"/>
<REGION seq_beg="56" pdb_beg="56" seq_end="75" pdb_end="75" type="H"/>
<REGION seq_beg="76" pdb_beg="76" seq_end="99" pdb_end="99" type="1"/>
<REGION seq_beg="100" pdb_beg="100" seq_end="121" pdb_end="121" type="H"/>
<REGION seq_beg="122" pdb_beg="122" seq_end="136" pdb_end="136" type="2"/>
<REGION seq_beg="142" pdb_beg="142" seq_end="197" pdb_end="197" type="2"/>
<REGION seq_beg="200" pdb_beg="200" seq_end="236" pdb_end="236" type="2"/>
<REGION seq_beg="243" pdb_beg="243" seq_end="267" pdb_end="267" type="2"/>
<REGION seq_beg="268" pdb_beg="268" seq_end="287" pdb_end="287" type="H"/>
<REGION seq_beg="288" pdb_beg="288" seq_end="296" pdb_end="296" type="1"/>
<REGION seq_beg="297" pdb_beg="297" seq_end="316" pdb_end="316" type="H"/>
<REGION seq_beg="317" pdb_beg="317" seq_end="329" pdb_end="329" type="2"/>
<REGION seq_beg="330" pdb_beg="330" seq_end="348" pdb_end="348" type="H"/>
<REGION seq_beg="349" pdb_beg="349" seq_end="350" pdb_end="350" type="1"/>
<REGION seq_beg="351" pdb_beg="351" seq_end="362" pdb_end="362" type="F"/>
<REGION seq_beg="363" pdb_beg="363" seq_end="363" pdb_end="363" type="1"/>
</CHAIN>
<CHAIN CHAINID="G" NUM_TM="6" TYPE="alpha">
<SEQ>
MFKILDWYIG RTIVATTALV LVTFVGLSGI IKYVEQLRKV GEGSYDLLQA
LLFVVLSIPR DVEMFFPMAA LLGALIGLGA LASSSELVVM QAAGFSKLDI
GLSVLKTAIP LMIIVTLLGE WGAPQAQKMA RDMRAFATSG GAIMSVRTGV
WARDANDFIF IAKVENEHLY GLNLWRFDEN KKLSTVIFSE QVDYVANNEW
LMKDAVLTRL VNDIEISKES LPEYRWRTSL APDKLAVVTV KPEELSLTGL
SDYVHYLKAS EQDSSRYELA LWRKVTQPIS IAVMMLMALS FIFGPLRSVT
MGARILSGVI AGFSFYISSE FFGPLSLVYG LPPLFGALAP SLVFLAIALG
LLGRKL
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="13" pdb_end="13" type="1"/>
<REGION seq_beg="14" pdb_beg="14" seq_end="37" pdb_end="37" type="H"/>
<REGION seq_beg="38" pdb_beg="38" seq_end="47" pdb_end="47" type="2"/>
<REGION seq_beg="48" pdb_beg="48" seq_end="76" pdb_end="76" type="H"/>
<REGION seq_beg="77" pdb_beg="77" seq_end="104" pdb_end="104" type="1"/>
<REGION seq_beg="105" pdb_beg="105" seq_end="127" pdb_end="127" type="H"/>
<REGION seq_beg="128" pdb_beg="128" seq_end="143" pdb_end="143" type="2"/>
<REGION seq_beg="146" pdb_beg="146" seq_end="270" pdb_end="270" type="2"/>
<REGION seq_beg="271" pdb_beg="271" seq_end="291" pdb_end="291" type="H"/>
<REGION seq_beg="292" pdb_beg="292" seq_end="302" pdb_end="302" type="1"/>
<REGION seq_beg="303" pdb_beg="303" seq_end="323" pdb_end="323" type="H"/>
<REGION seq_beg="324" pdb_beg="324" seq_end="334" pdb_end="334" type="2"/>
<REGION seq_beg="335" pdb_beg="335" seq_end="353" pdb_end="353" type="H"/>
<REGION seq_beg="354" pdb_beg="354" seq_end="356" pdb_end="356" type="1"/>
</CHAIN>
</pdbtm>
Overview
6mjp
PDB code:6mjp
Chain(s):A[0], B[0], C[1], F[6], G[6]
PDBTM type:Tm_Alpha
Title:LPTB(E163Q)FGC FROM VIBRIO CHOLERAE
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