PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2023-01-20
Number of transmembrane proteins: 8098 (alpha: 7567 , beta: 526 )
Content of 6g7j
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm.enzim.hu/data/pdbtm.xsd pdbtm.xsd" ID="6g7j" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2019-03-16</CREATE_DATE>
<RAWRES>
<TMRES>68.64</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
<PDBKWORD>Rhodopsin</PDBKWORD>
</RAWRES>
<BIOMATRIX>
<MATRIX ID="1">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="B"/>
<TMATRIX>
<ROWX X="-0.50000000" Y="-0.86602497" Z="0.00000000" T="31.15999985"/>
<ROWY X="0.86602497" Y="-0.50000000" Z="0.00000000" T="53.97069931"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="2">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="C"/>
<TMATRIX>
<ROWX X="-0.50000000" Y="0.86602497" Z="0.00000000" T="-31.15999985"/>
<ROWY X="-0.86602497" Y="-0.50000000" Z="0.00000000" T="53.97069931"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
</BIOMATRIX>
<MEMBRANE>
<NORMAL X="-0.00000020" Y="-0.00000014" Z="13.25000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="0.00000996"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-35.98045349"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-32.11399841"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="7" TYPE="alpha">
<SEQ>
MLELLPTAVE GVSQAQITGR PEWIWLALGT ALMGLGTLYF LVKGMGVSDP
DAKKFYAITT LVPAIAFTMY LSMLLGYGLT MVPFGGEQNP IYWARYADWL
FTTPLLLLDL ALLVDADQGT ILALVGADGI MIGTGLVGAL TKVYSYRFVW
WAISTAAMLY ILYVLFFGFT SKAESMRPEV ASTFKVLRNV TVVLWSAYPV
VWLIGSEGAG IVPLNIETLL FMVLDVSAKV GFGLILLRSR AIFGEAEAPE
PSAGDGAAAT SD
</SEQ>
<REGION seq_beg="18" pdb_beg="5" seq_end="23" pdb_end="10" type="1"/>
<REGION seq_beg="24" pdb_beg="11" seq_end="41" pdb_end="28" type="H"/>
<REGION seq_beg="42" pdb_beg="29" seq_end="59" pdb_end="46" type="2"/>
<REGION seq_beg="60" pdb_beg="47" seq_end="75" pdb_end="62" type="H"/>
<REGION seq_beg="76" pdb_beg="63" seq_end="92" pdb_end="79" type="1"/>
<REGION seq_beg="93" pdb_beg="80" seq_end="107" pdb_end="94" type="H"/>
<REGION seq_beg="108" pdb_beg="95" seq_end="123" pdb_end="110" type="2"/>
<REGION seq_beg="124" pdb_beg="111" seq_end="140" pdb_end="127" type="H"/>
<REGION seq_beg="141" pdb_beg="128" seq_end="146" pdb_end="133" type="1"/>
<REGION seq_beg="147" pdb_beg="134" seq_end="163" pdb_end="150" type="H"/>
<REGION seq_beg="164" pdb_beg="151" seq_end="190" pdb_end="177" type="2"/>
<REGION seq_beg="191" pdb_beg="178" seq_end="205" pdb_end="192" type="H"/>
<REGION seq_beg="206" pdb_beg="193" seq_end="216" pdb_end="203" type="1"/>
<REGION seq_beg="217" pdb_beg="204" seq_end="233" pdb_end="220" type="H"/>
<REGION seq_beg="234" pdb_beg="221" seq_end="247" pdb_end="234" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="7" TYPE="alpha">
<SEQ>
MLELLPTAVE GVSQAQITGR PEWIWLALGT ALMGLGTLYF LVKGMGVSDP
DAKKFYAITT LVPAIAFTMY LSMLLGYGLT MVPFGGEQNP IYWARYADWL
FTTPLLLLDL ALLVDADQGT ILALVGADGI MIGTGLVGAL TKVYSYRFVW
WAISTAAMLY ILYVLFFGFT SKAESMRPEV ASTFKVLRNV TVVLWSAYPV
VWLIGSEGAG IVPLNIETLL FMVLDVSAKV GFGLILLRSR AIFGEAEAPE
PSAGDGAAAT SD
</SEQ>
<REGION seq_beg="18" pdb_beg="5" seq_end="23" pdb_end="10" type="1"/>
<REGION seq_beg="24" pdb_beg="11" seq_end="41" pdb_end="28" type="H"/>
<REGION seq_beg="42" pdb_beg="29" seq_end="59" pdb_end="46" type="2"/>
<REGION seq_beg="60" pdb_beg="47" seq_end="75" pdb_end="62" type="H"/>
<REGION seq_beg="76" pdb_beg="63" seq_end="92" pdb_end="79" type="1"/>
<REGION seq_beg="93" pdb_beg="80" seq_end="107" pdb_end="94" type="H"/>
<REGION seq_beg="108" pdb_beg="95" seq_end="123" pdb_end="110" type="2"/>
<REGION seq_beg="124" pdb_beg="111" seq_end="140" pdb_end="127" type="H"/>
<REGION seq_beg="141" pdb_beg="128" seq_end="146" pdb_end="133" type="1"/>
<REGION seq_beg="147" pdb_beg="134" seq_end="163" pdb_end="150" type="H"/>
<REGION seq_beg="164" pdb_beg="151" seq_end="190" pdb_end="177" type="2"/>
<REGION seq_beg="191" pdb_beg="178" seq_end="205" pdb_end="192" type="H"/>
<REGION seq_beg="206" pdb_beg="193" seq_end="216" pdb_end="203" type="1"/>
<REGION seq_beg="217" pdb_beg="204" seq_end="233" pdb_end="220" type="H"/>
<REGION seq_beg="234" pdb_beg="221" seq_end="247" pdb_end="234" type="2"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="7" TYPE="alpha">
<SEQ>
MLELLPTAVE GVSQAQITGR PEWIWLALGT ALMGLGTLYF LVKGMGVSDP
DAKKFYAITT LVPAIAFTMY LSMLLGYGLT MVPFGGEQNP IYWARYADWL
FTTPLLLLDL ALLVDADQGT ILALVGADGI MIGTGLVGAL TKVYSYRFVW
WAISTAAMLY ILYVLFFGFT SKAESMRPEV ASTFKVLRNV TVVLWSAYPV
VWLIGSEGAG IVPLNIETLL FMVLDVSAKV GFGLILLRSR AIFGEAEAPE
PSAGDGAAAT SD
</SEQ>
<REGION seq_beg="18" pdb_beg="5" seq_end="23" pdb_end="10" type="1"/>
<REGION seq_beg="24" pdb_beg="11" seq_end="41" pdb_end="28" type="H"/>
<REGION seq_beg="42" pdb_beg="29" seq_end="59" pdb_end="46" type="2"/>
<REGION seq_beg="60" pdb_beg="47" seq_end="75" pdb_end="62" type="H"/>
<REGION seq_beg="76" pdb_beg="63" seq_end="92" pdb_end="79" type="1"/>
<REGION seq_beg="93" pdb_beg="80" seq_end="107" pdb_end="94" type="H"/>
<REGION seq_beg="108" pdb_beg="95" seq_end="123" pdb_end="110" type="2"/>
<REGION seq_beg="124" pdb_beg="111" seq_end="140" pdb_end="127" type="H"/>
<REGION seq_beg="141" pdb_beg="128" seq_end="146" pdb_end="133" type="1"/>
<REGION seq_beg="147" pdb_beg="134" seq_end="163" pdb_end="150" type="H"/>
<REGION seq_beg="164" pdb_beg="151" seq_end="190" pdb_end="177" type="2"/>
<REGION seq_beg="191" pdb_beg="178" seq_end="205" pdb_end="192" type="H"/>
<REGION seq_beg="206" pdb_beg="193" seq_end="216" pdb_end="203" type="1"/>
<REGION seq_beg="217" pdb_beg="204" seq_end="233" pdb_end="220" type="H"/>
<REGION seq_beg="234" pdb_beg="221" seq_end="247" pdb_end="234" type="2"/>
</CHAIN>
</pdbtm>
Overview
6g7j
PDB code:6g7j
Chain(s):
PDBTM type:Tm_Alpha
Title:RETINAL ISOMERIZATION IN BACTERIORHODOPSIN REVEALED BY A FEMTOSECOND X-RAY LASER: 457-646 FS STATE STRUCTURE
Downloads
Cross references