PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2019-02-15
Number of transmembrane proteins: 4061 (alpha: 3612 , beta: 427 )
Content of 6bob
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm.enzim.hu/data/pdbtm.xsd pdbtm.xsd" ID="6bob" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2018-09-13</CREATE_DATE>
<MODIFICATION>
<DATE>2018-09-13</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>69.07</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="-0.05329265" Y="-0.05198114" Z="16.49983215"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-100.04701996"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-100.18566895"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-80.70111084"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MGWSLPKEKG LILCLWNKFC RWFHRRESWA QSRDEQNLLQ QKRIWESPLL
LAAKENNVQA LYKLLKFEGC EVHQKGAMGE TALHIAALYD NNEAAQVLME
AAPELVFEPM TSELYEGQTA LHIAVINQNV NLVRALLARG ASVSARATGS
VFHYRPHNLI YYGEHPLSFA ACVGSEEIVR LLIEHGADIR AQDSLGNTVL
HILILQPNKT FACQMYNLLL SYDGGDHLKS LELVPNNQGL TPFKLAGVEG
NIVMFQHLMQ KRKHIQWTYG PLTSTLYDLT EIDSSGDDQS LLELIVTTKK
REARQILDQT PVKELVSLKW KRYGRPYFCV LGAIYVLYII CFTMCCVYRP
LKPRITNRTN PRDNTLLQQK LLQEAYVTPK DDLRLVGELV SIVGAVIILL
VEIPDIFRLG VTRFFGQTIL GGPFHVIIVT YAFMVLVTMV MRLTNSDGEV
VPMSFALVLG WCNVMYFARG FQMLGPFTIM IQKMIFGDLM RFCWLMAVVI
LGFASAFYII FQTEDPDELG HFYDYPMALF STFELFLTII DGPANYDVDL
PFMYSITYAA FAIIATLLML NLLIAMMGDT HWRVAHERDE LWRAQVVATT
VMLERKLPRC LWPRSGICGR EYGLGDRWFL RVEDRQDLNR QRIRRYAQAF
QQQDDLYSED LEKDSGEKLV PR
</SEQ>
<REGION seq_beg="27" pdb_beg="27" seq_end="327" pdb_end="327" type="2"/>
<REGION seq_beg="328" pdb_beg="328" seq_end="348" pdb_end="348" type="H"/>
<REGION seq_beg="349" pdb_beg="349" seq_end="383" pdb_end="383" type="1"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="407" pdb_end="407" type="H"/>
<REGION seq_beg="408" pdb_beg="408" seq_end="414" pdb_end="414" type="2"/>
<REGION seq_beg="423" pdb_beg="423" seq_end="423" pdb_end="423" type="2"/>
<REGION seq_beg="424" pdb_beg="424" seq_end="442" pdb_end="442" type="H"/>
<REGION seq_beg="443" pdb_beg="443" seq_end="448" pdb_end="448" type="1"/>
<REGION seq_beg="449" pdb_beg="449" seq_end="469" pdb_end="469" type="H"/>
<REGION seq_beg="470" pdb_beg="470" seq_end="474" pdb_end="474" type="2"/>
<REGION seq_beg="475" pdb_beg="475" seq_end="480" pdb_end="480" type="F"/>
<REGION seq_beg="481" pdb_beg="481" seq_end="510" pdb_end="510" type="H"/>
<REGION seq_beg="511" pdb_beg="511" seq_end="525" pdb_end="525" type="1"/>
<REGION seq_beg="526" pdb_beg="526" seq_end="544" pdb_end="544" type="L"/>
<REGION seq_beg="545" pdb_beg="545" seq_end="551" pdb_end="551" type="1"/>
<REGION seq_beg="552" pdb_beg="552" seq_end="576" pdb_end="576" type="H"/>
<REGION seq_beg="577" pdb_beg="577" seq_end="588" pdb_end="588" type="2"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="606" pdb_end="606" type="F"/>
<REGION seq_beg="607" pdb_beg="607" seq_end="637" pdb_end="637" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
MGWSLPKEKG LILCLWNKFC RWFHRRESWA QSRDEQNLLQ QKRIWESPLL
LAAKENNVQA LYKLLKFEGC EVHQKGAMGE TALHIAALYD NNEAAQVLME
AAPELVFEPM TSELYEGQTA LHIAVINQNV NLVRALLARG ASVSARATGS
VFHYRPHNLI YYGEHPLSFA ACVGSEEIVR LLIEHGADIR AQDSLGNTVL
HILILQPNKT FACQMYNLLL SYDGGDHLKS LELVPNNQGL TPFKLAGVEG
NIVMFQHLMQ KRKHIQWTYG PLTSTLYDLT EIDSSGDDQS LLELIVTTKK
REARQILDQT PVKELVSLKW KRYGRPYFCV LGAIYVLYII CFTMCCVYRP
LKPRITNRTN PRDNTLLQQK LLQEAYVTPK DDLRLVGELV SIVGAVIILL
VEIPDIFRLG VTRFFGQTIL GGPFHVIIVT YAFMVLVTMV MRLTNSDGEV
VPMSFALVLG WCNVMYFARG FQMLGPFTIM IQKMIFGDLM RFCWLMAVVI
LGFASAFYII FQTEDPDELG HFYDYPMALF STFELFLTII DGPANYDVDL
PFMYSITYAA FAIIATLLML NLLIAMMGDT HWRVAHERDE LWRAQVVATT
VMLERKLPRC LWPRSGICGR EYGLGDRWFL RVEDRQDLNR QRIRRYAQAF
QQQDDLYSED LEKDSGEKLV PR
</SEQ>
<REGION seq_beg="27" pdb_beg="27" seq_end="327" pdb_end="327" type="2"/>
<REGION seq_beg="328" pdb_beg="328" seq_end="348" pdb_end="348" type="H"/>
<REGION seq_beg="349" pdb_beg="349" seq_end="383" pdb_end="383" type="1"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="407" pdb_end="407" type="H"/>
<REGION seq_beg="408" pdb_beg="408" seq_end="414" pdb_end="414" type="2"/>
<REGION seq_beg="423" pdb_beg="423" seq_end="423" pdb_end="423" type="2"/>
<REGION seq_beg="424" pdb_beg="424" seq_end="442" pdb_end="442" type="H"/>
<REGION seq_beg="443" pdb_beg="443" seq_end="448" pdb_end="448" type="1"/>
<REGION seq_beg="449" pdb_beg="449" seq_end="469" pdb_end="469" type="H"/>
<REGION seq_beg="470" pdb_beg="470" seq_end="477" pdb_end="477" type="2"/>
<REGION seq_beg="478" pdb_beg="478" seq_end="510" pdb_end="510" type="H"/>
<REGION seq_beg="511" pdb_beg="511" seq_end="525" pdb_end="525" type="1"/>
<REGION seq_beg="526" pdb_beg="526" seq_end="544" pdb_end="544" type="L"/>
<REGION seq_beg="545" pdb_beg="545" seq_end="551" pdb_end="551" type="1"/>
<REGION seq_beg="552" pdb_beg="552" seq_end="576" pdb_end="576" type="H"/>
<REGION seq_beg="577" pdb_beg="577" seq_end="588" pdb_end="588" type="2"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="606" pdb_end="606" type="F"/>
<REGION seq_beg="607" pdb_beg="607" seq_end="637" pdb_end="637" type="2"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
MGWSLPKEKG LILCLWNKFC RWFHRRESWA QSRDEQNLLQ QKRIWESPLL
LAAKENNVQA LYKLLKFEGC EVHQKGAMGE TALHIAALYD NNEAAQVLME
AAPELVFEPM TSELYEGQTA LHIAVINQNV NLVRALLARG ASVSARATGS
VFHYRPHNLI YYGEHPLSFA ACVGSEEIVR LLIEHGADIR AQDSLGNTVL
HILILQPNKT FACQMYNLLL SYDGGDHLKS LELVPNNQGL TPFKLAGVEG
NIVMFQHLMQ KRKHIQWTYG PLTSTLYDLT EIDSSGDDQS LLELIVTTKK
REARQILDQT PVKELVSLKW KRYGRPYFCV LGAIYVLYII CFTMCCVYRP
LKPRITNRTN PRDNTLLQQK LLQEAYVTPK DDLRLVGELV SIVGAVIILL
VEIPDIFRLG VTRFFGQTIL GGPFHVIIVT YAFMVLVTMV MRLTNSDGEV
VPMSFALVLG WCNVMYFARG FQMLGPFTIM IQKMIFGDLM RFCWLMAVVI
LGFASAFYII FQTEDPDELG HFYDYPMALF STFELFLTII DGPANYDVDL
PFMYSITYAA FAIIATLLML NLLIAMMGDT HWRVAHERDE LWRAQVVATT
VMLERKLPRC LWPRSGICGR EYGLGDRWFL RVEDRQDLNR QRIRRYAQAF
QQQDDLYSED LEKDSGEKLV PR
</SEQ>
<REGION seq_beg="27" pdb_beg="27" seq_end="327" pdb_end="327" type="2"/>
<REGION seq_beg="328" pdb_beg="328" seq_end="348" pdb_end="348" type="H"/>
<REGION seq_beg="349" pdb_beg="349" seq_end="383" pdb_end="383" type="1"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="407" pdb_end="407" type="H"/>
<REGION seq_beg="408" pdb_beg="408" seq_end="414" pdb_end="414" type="2"/>
<REGION seq_beg="423" pdb_beg="423" seq_end="423" pdb_end="423" type="2"/>
<REGION seq_beg="424" pdb_beg="424" seq_end="442" pdb_end="442" type="H"/>
<REGION seq_beg="443" pdb_beg="443" seq_end="448" pdb_end="448" type="1"/>
<REGION seq_beg="449" pdb_beg="449" seq_end="469" pdb_end="469" type="H"/>
<REGION seq_beg="470" pdb_beg="470" seq_end="474" pdb_end="474" type="2"/>
<REGION seq_beg="475" pdb_beg="475" seq_end="480" pdb_end="480" type="F"/>
<REGION seq_beg="481" pdb_beg="481" seq_end="510" pdb_end="510" type="H"/>
<REGION seq_beg="511" pdb_beg="511" seq_end="525" pdb_end="525" type="1"/>
<REGION seq_beg="526" pdb_beg="526" seq_end="544" pdb_end="544" type="L"/>
<REGION seq_beg="545" pdb_beg="545" seq_end="551" pdb_end="551" type="1"/>
<REGION seq_beg="552" pdb_beg="552" seq_end="576" pdb_end="576" type="H"/>
<REGION seq_beg="577" pdb_beg="577" seq_end="588" pdb_end="588" type="2"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="606" pdb_end="606" type="F"/>
<REGION seq_beg="607" pdb_beg="607" seq_end="637" pdb_end="637" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
MGWSLPKEKG LILCLWNKFC RWFHRRESWA QSRDEQNLLQ QKRIWESPLL
LAAKENNVQA LYKLLKFEGC EVHQKGAMGE TALHIAALYD NNEAAQVLME
AAPELVFEPM TSELYEGQTA LHIAVINQNV NLVRALLARG ASVSARATGS
VFHYRPHNLI YYGEHPLSFA ACVGSEEIVR LLIEHGADIR AQDSLGNTVL
HILILQPNKT FACQMYNLLL SYDGGDHLKS LELVPNNQGL TPFKLAGVEG
NIVMFQHLMQ KRKHIQWTYG PLTSTLYDLT EIDSSGDDQS LLELIVTTKK
REARQILDQT PVKELVSLKW KRYGRPYFCV LGAIYVLYII CFTMCCVYRP
LKPRITNRTN PRDNTLLQQK LLQEAYVTPK DDLRLVGELV SIVGAVIILL
VEIPDIFRLG VTRFFGQTIL GGPFHVIIVT YAFMVLVTMV MRLTNSDGEV
VPMSFALVLG WCNVMYFARG FQMLGPFTIM IQKMIFGDLM RFCWLMAVVI
LGFASAFYII FQTEDPDELG HFYDYPMALF STFELFLTII DGPANYDVDL
PFMYSITYAA FAIIATLLML NLLIAMMGDT HWRVAHERDE LWRAQVVATT
VMLERKLPRC LWPRSGICGR EYGLGDRWFL RVEDRQDLNR QRIRRYAQAF
QQQDDLYSED LEKDSGEKLV PR
</SEQ>
<REGION seq_beg="27" pdb_beg="27" seq_end="327" pdb_end="327" type="2"/>
<REGION seq_beg="328" pdb_beg="328" seq_end="348" pdb_end="348" type="H"/>
<REGION seq_beg="349" pdb_beg="349" seq_end="383" pdb_end="383" type="1"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="407" pdb_end="407" type="H"/>
<REGION seq_beg="408" pdb_beg="408" seq_end="414" pdb_end="414" type="2"/>
<REGION seq_beg="423" pdb_beg="423" seq_end="423" pdb_end="423" type="2"/>
<REGION seq_beg="424" pdb_beg="424" seq_end="443" pdb_end="443" type="H"/>
<REGION seq_beg="444" pdb_beg="444" seq_end="448" pdb_end="448" type="1"/>
<REGION seq_beg="449" pdb_beg="449" seq_end="469" pdb_end="469" type="H"/>
<REGION seq_beg="470" pdb_beg="470" seq_end="474" pdb_end="474" type="2"/>
<REGION seq_beg="475" pdb_beg="475" seq_end="480" pdb_end="480" type="F"/>
<REGION seq_beg="481" pdb_beg="481" seq_end="510" pdb_end="510" type="H"/>
<REGION seq_beg="511" pdb_beg="511" seq_end="525" pdb_end="525" type="1"/>
<REGION seq_beg="526" pdb_beg="526" seq_end="544" pdb_end="544" type="L"/>
<REGION seq_beg="545" pdb_beg="545" seq_end="551" pdb_end="551" type="1"/>
<REGION seq_beg="552" pdb_beg="552" seq_end="576" pdb_end="576" type="H"/>
<REGION seq_beg="577" pdb_beg="577" seq_end="588" pdb_end="588" type="2"/>
<REGION seq_beg="589" pdb_beg="589" seq_end="606" pdb_end="606" type="F"/>
<REGION seq_beg="607" pdb_beg="607" seq_end="637" pdb_end="637" type="2"/>
</CHAIN>
</pdbtm>
Overview
6bob
PDB code:6bob
Chain(s):A[6], B[6], C[6], D[6]
PDBTM type:Tm_Alpha
Title:CRYO-EM STRUCTURE OF RAT TRPV6* IN NANODISCS
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