PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2017-12-29
Number of transmembrane proteins: 3456 (alpha: 3055 , beta: 385 )
Content of 5ye1
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="5ye1" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2018-09-26</CREATE_DATE>
<RAWRES>
<TMRES>48.16</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
<PDBKWORD>Membrane</PDBKWORD>
</RAWRES>
<MEMBRANE>
<NORMAL X="0.00469498" Y="0.00238365" Z="12.75000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-92.39833069"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-92.38933563"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-75.59768677"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MATPAGRRAS ETERLLTPNP GYGTQVGTSP APTTPTEEED LRRRLKYFFM
SPCDKFRAKG RKPCKLMLQV VKILVVTVQL ILFGLSNQLV VTFREENTIA
FRHLFLLGYS DGSDDTFAAY TQEQLYQAIF YAVDQYLILP EISLGRYAYV
RGGGGPWANG SALALCQRYY HRGHVDPAND TFDIDPRVVT DCIQVDPPDR
PPDIPSEDLD FLDGSASYKN LTLKFHKLIN VTIHFQLKTI NLQSLINNEI
PDCYTFSILI TFDNKAHSGR IPIRLETKTH IQECKHPSVS RHGDNSFRLL
FDVVVILTCS LSFLLCARSL LRGFLLQNEF VVFMWRRRGR EISLWERLEF
VNGWYILLVT SDVLTISGTV MKIGIEAKNL ASYDVCSILL GTSTLLVWVG
VIRYLTFFHK YNILIATLRV ALPSVMRFCC CVAVIYLGYC FCGWIVLGPY
HVKFRSLSMV SECLFSLING DDMFVTFAAM QAQQGHSSLV WLFSQLYLYS
FISLFIYMVL SLFIALITGA YDTIKHPGGT GTEKSELQAY IEQCQDSPTS
GKFRRGSGSA CSLFCCCGRD SPEDHSLLVN
</SEQ>
<REGION seq_beg="61" pdb_beg="61" seq_end="65" pdb_end="65" type="1"/>
<REGION seq_beg="66" pdb_beg="66" seq_end="84" pdb_end="84" type="H"/>
<REGION seq_beg="85" pdb_beg="85" seq_end="198" pdb_end="198" type="2"/>
<REGION seq_beg="220" pdb_beg="220" seq_end="287" pdb_end="287" type="2"/>
<REGION seq_beg="296" pdb_beg="296" seq_end="300" pdb_end="300" type="2"/>
<REGION seq_beg="301" pdb_beg="301" seq_end="317" pdb_end="317" type="H"/>
<REGION seq_beg="318" pdb_beg="318" seq_end="333" pdb_end="333" type="1"/>
<REGION seq_beg="350" pdb_beg="350" seq_end="356" pdb_end="356" type="1"/>
<REGION seq_beg="357" pdb_beg="357" seq_end="375" pdb_end="375" type="H"/>
<REGION seq_beg="376" pdb_beg="376" seq_end="382" pdb_end="382" type="2"/>
<REGION seq_beg="383" pdb_beg="383" seq_end="402" pdb_end="402" type="H"/>
<REGION seq_beg="403" pdb_beg="403" seq_end="429" pdb_end="429" type="1"/>
<REGION seq_beg="430" pdb_beg="430" seq_end="447" pdb_end="447" type="H"/>
<REGION seq_beg="448" pdb_beg="448" seq_end="456" pdb_end="456" type="2"/>
<REGION seq_beg="457" pdb_beg="457" seq_end="478" pdb_end="478" type="L"/>
<REGION seq_beg="479" pdb_beg="479" seq_end="489" pdb_end="489" type="2"/>
<REGION seq_beg="490" pdb_beg="490" seq_end="510" pdb_end="510" type="H"/>
<REGION seq_beg="511" pdb_beg="511" seq_end="529" pdb_end="529" type="1"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
MATPAGRRAS ETERLLTPNP GYGTQVGTSP APTTPTEEED LRRRLKYFFM
SPCDKFRAKG RKPCKLMLQV VKILVVTVQL ILFGLSNQLV VTFREENTIA
FRHLFLLGYS DGSDDTFAAY TQEQLYQAIF YAVDQYLILP EISLGRYAYV
RGGGGPWANG SALALCQRYY HRGHVDPAND TFDIDPRVVT DCIQVDPPDR
PPDIPSEDLD FLDGSASYKN LTLKFHKLIN VTIHFQLKTI NLQSLINNEI
PDCYTFSILI TFDNKAHSGR IPIRLETKTH IQECKHPSVS RHGDNSFRLL
FDVVVILTCS LSFLLCARSL LRGFLLQNEF VVFMWRRRGR EISLWERLEF
VNGWYILLVT SDVLTISGTV MKIGIEAKNL ASYDVCSILL GTSTLLVWVG
VIRYLTFFHK YNILIATLRV ALPSVMRFCC CVAVIYLGYC FCGWIVLGPY
HVKFRSLSMV SECLFSLING DDMFVTFAAM QAQQGHSSLV WLFSQLYLYS
FISLFIYMVL SLFIALITGA YDTIKHPGGT GTEKSELQAY IEQCQDSPTS
GKFRRGSGSA CSLFCCCGRD SPEDHSLLVN
</SEQ>
<REGION seq_beg="61" pdb_beg="61" seq_end="65" pdb_end="65" type="1"/>
<REGION seq_beg="66" pdb_beg="66" seq_end="84" pdb_end="84" type="H"/>
<REGION seq_beg="85" pdb_beg="85" seq_end="198" pdb_end="198" type="2"/>
<REGION seq_beg="220" pdb_beg="220" seq_end="287" pdb_end="287" type="2"/>
<REGION seq_beg="296" pdb_beg="296" seq_end="300" pdb_end="300" type="2"/>
<REGION seq_beg="301" pdb_beg="301" seq_end="317" pdb_end="317" type="H"/>
<REGION seq_beg="318" pdb_beg="318" seq_end="333" pdb_end="333" type="1"/>
<REGION seq_beg="350" pdb_beg="350" seq_end="356" pdb_end="356" type="1"/>
<REGION seq_beg="357" pdb_beg="357" seq_end="375" pdb_end="375" type="H"/>
<REGION seq_beg="376" pdb_beg="376" seq_end="382" pdb_end="382" type="2"/>
<REGION seq_beg="383" pdb_beg="383" seq_end="402" pdb_end="402" type="H"/>
<REGION seq_beg="403" pdb_beg="403" seq_end="429" pdb_end="429" type="1"/>
<REGION seq_beg="430" pdb_beg="430" seq_end="447" pdb_end="447" type="H"/>
<REGION seq_beg="448" pdb_beg="448" seq_end="456" pdb_end="456" type="2"/>
<REGION seq_beg="457" pdb_beg="457" seq_end="478" pdb_end="478" type="L"/>
<REGION seq_beg="479" pdb_beg="479" seq_end="489" pdb_end="489" type="2"/>
<REGION seq_beg="490" pdb_beg="490" seq_end="510" pdb_end="510" type="H"/>
<REGION seq_beg="511" pdb_beg="511" seq_end="529" pdb_end="529" type="1"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
MATPAGRRAS ETERLLTPNP GYGTQVGTSP APTTPTEEED LRRRLKYFFM
SPCDKFRAKG RKPCKLMLQV VKILVVTVQL ILFGLSNQLV VTFREENTIA
FRHLFLLGYS DGSDDTFAAY TQEQLYQAIF YAVDQYLILP EISLGRYAYV
RGGGGPWANG SALALCQRYY HRGHVDPAND TFDIDPRVVT DCIQVDPPDR
PPDIPSEDLD FLDGSASYKN LTLKFHKLIN VTIHFQLKTI NLQSLINNEI
PDCYTFSILI TFDNKAHSGR IPIRLETKTH IQECKHPSVS RHGDNSFRLL
FDVVVILTCS LSFLLCARSL LRGFLLQNEF VVFMWRRRGR EISLWERLEF
VNGWYILLVT SDVLTISGTV MKIGIEAKNL ASYDVCSILL GTSTLLVWVG
VIRYLTFFHK YNILIATLRV ALPSVMRFCC CVAVIYLGYC FCGWIVLGPY
HVKFRSLSMV SECLFSLING DDMFVTFAAM QAQQGHSSLV WLFSQLYLYS
FISLFIYMVL SLFIALITGA YDTIKHPGGT GTEKSELQAY IEQCQDSPTS
GKFRRGSGSA CSLFCCCGRD SPEDHSLLVN
</SEQ>
<REGION seq_beg="61" pdb_beg="61" seq_end="65" pdb_end="65" type="1"/>
<REGION seq_beg="66" pdb_beg="66" seq_end="84" pdb_end="84" type="H"/>
<REGION seq_beg="85" pdb_beg="85" seq_end="198" pdb_end="198" type="2"/>
<REGION seq_beg="220" pdb_beg="220" seq_end="287" pdb_end="287" type="2"/>
<REGION seq_beg="296" pdb_beg="296" seq_end="300" pdb_end="300" type="2"/>
<REGION seq_beg="301" pdb_beg="301" seq_end="317" pdb_end="317" type="H"/>
<REGION seq_beg="318" pdb_beg="318" seq_end="333" pdb_end="333" type="1"/>
<REGION seq_beg="350" pdb_beg="350" seq_end="356" pdb_end="356" type="1"/>
<REGION seq_beg="357" pdb_beg="357" seq_end="375" pdb_end="375" type="H"/>
<REGION seq_beg="376" pdb_beg="376" seq_end="382" pdb_end="382" type="2"/>
<REGION seq_beg="383" pdb_beg="383" seq_end="402" pdb_end="402" type="H"/>
<REGION seq_beg="403" pdb_beg="403" seq_end="429" pdb_end="429" type="1"/>
<REGION seq_beg="430" pdb_beg="430" seq_end="447" pdb_end="447" type="H"/>
<REGION seq_beg="448" pdb_beg="448" seq_end="456" pdb_end="456" type="2"/>
<REGION seq_beg="457" pdb_beg="457" seq_end="478" pdb_end="478" type="L"/>
<REGION seq_beg="479" pdb_beg="479" seq_end="489" pdb_end="489" type="2"/>
<REGION seq_beg="490" pdb_beg="490" seq_end="510" pdb_end="510" type="H"/>
<REGION seq_beg="511" pdb_beg="511" seq_end="529" pdb_end="529" type="1"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
MATPAGRRAS ETERLLTPNP GYGTQVGTSP APTTPTEEED LRRRLKYFFM
SPCDKFRAKG RKPCKLMLQV VKILVVTVQL ILFGLSNQLV VTFREENTIA
FRHLFLLGYS DGSDDTFAAY TQEQLYQAIF YAVDQYLILP EISLGRYAYV
RGGGGPWANG SALALCQRYY HRGHVDPAND TFDIDPRVVT DCIQVDPPDR
PPDIPSEDLD FLDGSASYKN LTLKFHKLIN VTIHFQLKTI NLQSLINNEI
PDCYTFSILI TFDNKAHSGR IPIRLETKTH IQECKHPSVS RHGDNSFRLL
FDVVVILTCS LSFLLCARSL LRGFLLQNEF VVFMWRRRGR EISLWERLEF
VNGWYILLVT SDVLTISGTV MKIGIEAKNL ASYDVCSILL GTSTLLVWVG
VIRYLTFFHK YNILIATLRV ALPSVMRFCC CVAVIYLGYC FCGWIVLGPY
HVKFRSLSMV SECLFSLING DDMFVTFAAM QAQQGHSSLV WLFSQLYLYS
FISLFIYMVL SLFIALITGA YDTIKHPGGT GTEKSELQAY IEQCQDSPTS
GKFRRGSGSA CSLFCCCGRD SPEDHSLLVN
</SEQ>
<REGION seq_beg="61" pdb_beg="61" seq_end="65" pdb_end="65" type="1"/>
<REGION seq_beg="66" pdb_beg="66" seq_end="84" pdb_end="84" type="H"/>
<REGION seq_beg="85" pdb_beg="85" seq_end="198" pdb_end="198" type="2"/>
<REGION seq_beg="220" pdb_beg="220" seq_end="287" pdb_end="287" type="2"/>
<REGION seq_beg="296" pdb_beg="296" seq_end="300" pdb_end="300" type="2"/>
<REGION seq_beg="301" pdb_beg="301" seq_end="317" pdb_end="317" type="H"/>
<REGION seq_beg="318" pdb_beg="318" seq_end="333" pdb_end="333" type="1"/>
<REGION seq_beg="350" pdb_beg="350" seq_end="356" pdb_end="356" type="1"/>
<REGION seq_beg="357" pdb_beg="357" seq_end="375" pdb_end="375" type="H"/>
<REGION seq_beg="376" pdb_beg="376" seq_end="382" pdb_end="382" type="2"/>
<REGION seq_beg="383" pdb_beg="383" seq_end="402" pdb_end="402" type="H"/>
<REGION seq_beg="403" pdb_beg="403" seq_end="429" pdb_end="429" type="1"/>
<REGION seq_beg="430" pdb_beg="430" seq_end="447" pdb_end="447" type="H"/>
<REGION seq_beg="448" pdb_beg="448" seq_end="456" pdb_end="456" type="2"/>
<REGION seq_beg="457" pdb_beg="457" seq_end="478" pdb_end="478" type="L"/>
<REGION seq_beg="479" pdb_beg="479" seq_end="489" pdb_end="489" type="2"/>
<REGION seq_beg="490" pdb_beg="490" seq_end="510" pdb_end="510" type="H"/>
<REGION seq_beg="511" pdb_beg="511" seq_end="529" pdb_end="529" type="1"/>
</CHAIN>
</pdbtm>
Overview
5ye1
PDB code:5ye1
Chain(s):A[6], B[6], C[6], D[6]
PDBTM type:Tm_Alpha
Title:STRUCTURE OF ENDO-LYSOSOMAL TRPML1 CHANNEL INSERTING INTO AMPHIPOL: STATE 2
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