PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2018-09-14
Number of transmembrane proteins: 3846 (alpha: 3415 , beta: 411 )
Content of 5x5y
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="5x5y" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2017-06-15</CREATE_DATE>
<MODIFICATION>
<DATE>2017-06-15</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>68.19</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
<PDBKWORD>Membrane</PDBKWORD>
</RAWRES>
<MEMBRANE>
<NORMAL X="0.00000002" Y="-0.00000009" Z="16.75000000"/>
<TMATRIX>
<ROWX X="0.88250083" Y="0.34762454" Z="-0.31678003" T="36.34309769"/>
<ROWY X="0.00000000" Y="0.67355442" Z="0.73913765" T="-13.42688370"/>
<ROWZ X="0.47031096" Y="-0.65228957" Z="0.59441233" T="-12.68348217"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="B" NUM_TM="0" TYPE="non_tm">
<SEQ>
MATLKAQHLA KSYKGRQVVR DVSMSIDSGQ IVGLLGPNGA GKTTCFYMIV
GLVQADQGVV RIDEQNVTHL PMHGRARAGI GYLPQEASIF RKLSVSDNIM
AILETRSDLD RNGRKEALEG LLQEFHIHHI RDNLGMSLSG GERRRVEIAR
ALASAPKFIL LDEPFAGVDP ISVGDIKQII HHLKAKGIGI LITDHNVRET
LDICETAYIV NDGQLIAEGD AESILANDLV KEVYLGHEFR LHHHHHH
</SEQ>
<REGION seq_beg="2" pdb_beg="2" seq_end="240" pdb_end="240" type="2"/>
</CHAIN>
<CHAIN CHAINID="A" NUM_TM="0" TYPE="non_tm">
<SEQ>
MATLKAQHLA KSYKGRQVVR DVSMSIDSGQ IVGLLGPNGA GKTTCFYMIV
GLVQADQGVV RIDEQNVTHL PMHGRARAGI GYLPQEASIF RKLSVSDNIM
AILETRSDLD RNGRKEALEG LLQEFHIHHI RDNLGMSLSG GERRRVEIAR
ALASAPKFIL LDEPFAGVDP ISVGDIKQII HHLKAKGIGI LITDHNVRET
LDICETAYIV NDGQLIAEGD AESILANDLV KEVYLGHEFR LHHHHHH
</SEQ>
<REGION seq_beg="2" pdb_beg="2" seq_end="240" pdb_end="240" type="2"/>
</CHAIN>
<CHAIN CHAINID="G" NUM_TM="6" TYPE="alpha">
<SEQ>
MVKLDRYIGV TVFVAILAVL GVILGLALLF AFIDELNDIS ASYGIGDALR
FIFLTAPRRA YDMLPMAALI GCLVGLGTLA SNSELTIMRA AGVSLSRIVW
AVMKPMLVLM LAGILVGEYV APWTENIAQS GRALAQGGGD SQSSKRGLWH
RQGREYIHIN AVQPNGVLYG VTRYRFDEQR GLESASFAKR ARFETDHWQL
EEVTTTLLHP REKRSEVVKL PTERWDAQLS PQLLNTVVME PEALSISGLW
QYIHYLADQG LNNNRYWLAF WTKVLQPLVT AALVLMAISF IFGPLRSVTL
GQRIFTGVLV GFVFRIAQDL LGPSSLVFDF PPLLAVVIPA SICALAGVWL
LRRAG
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="8" pdb_end="8" type="2"/>
<REGION seq_beg="9" pdb_beg="9" seq_end="36" pdb_end="36" type="H"/>
<REGION seq_beg="37" pdb_beg="37" seq_end="48" pdb_end="48" type="1"/>
<REGION seq_beg="49" pdb_beg="49" seq_end="77" pdb_end="77" type="H"/>
<REGION seq_beg="78" pdb_beg="78" seq_end="83" pdb_end="83" type="2"/>
<REGION seq_beg="84" pdb_beg="84" seq_end="89" pdb_end="89" type="F"/>
<REGION seq_beg="90" pdb_beg="90" seq_end="96" pdb_end="96" type="2"/>
<REGION seq_beg="97" pdb_beg="97" seq_end="122" pdb_end="122" type="H"/>
<REGION seq_beg="123" pdb_beg="123" seq_end="210" pdb_end="210" type="1"/>
<REGION seq_beg="214" pdb_beg="214" seq_end="268" pdb_end="268" type="1"/>
<REGION seq_beg="269" pdb_beg="269" seq_end="292" pdb_end="292" type="H"/>
<REGION seq_beg="293" pdb_beg="293" seq_end="300" pdb_end="300" type="2"/>
<REGION seq_beg="301" pdb_beg="301" seq_end="325" pdb_end="325" type="H"/>
<REGION seq_beg="326" pdb_beg="326" seq_end="330" pdb_end="330" type="1"/>
<REGION seq_beg="331" pdb_beg="331" seq_end="352" pdb_end="352" type="H"/>
<REGION seq_beg="353" pdb_beg="353" seq_end="354" pdb_end="354" type="2"/>
</CHAIN>
<CHAIN CHAINID="F" NUM_TM="6" TYPE="alpha">
<SEQ>
MIVFRYLSRE VLVTMSAVSA VLLVIIMSGR FIKYLAQAAQ GLLDPGSLFL
IMAFRIPGFL QLILPLGLFL GILLAYGRLY LESEMTVLSA TGMSQKRLLG
YTMAPALLVA ILVAWLSLFL APQGINQFAL LLNKQDTLTE FDTLVPGRFQ
AMRDGTRVTY TEELSKDRGE LAGIFISQKD LNSSNQERGI SILVAEKGTQ
NIQADGSRYL ILHNGYRYDG NPGQANYRAI QYDTYGVMLP KPEASSEVSE
RDAVPTADLF GSDNPRYQAE LQWRLSTPLL VFVVTLLAVP LSRVNPRQGR
FLKLLPAILL YMGYLALLIA VRGQLDKGKI PMAIGLWWVH GLFLAIGLLL
FYWEPLRLKL AS
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="7" pdb_end="7" type="2"/>
<REGION seq_beg="8" pdb_beg="8" seq_end="33" pdb_end="33" type="H"/>
<REGION seq_beg="34" pdb_beg="34" seq_end="52" pdb_end="52" type="1"/>
<REGION seq_beg="53" pdb_beg="53" seq_end="77" pdb_end="77" type="H"/>
<REGION seq_beg="78" pdb_beg="78" seq_end="83" pdb_end="83" type="2"/>
<REGION seq_beg="84" pdb_beg="84" seq_end="89" pdb_end="89" type="F"/>
<REGION seq_beg="90" pdb_beg="90" seq_end="96" pdb_end="96" type="2"/>
<REGION seq_beg="97" pdb_beg="97" seq_end="121" pdb_end="121" type="H"/>
<REGION seq_beg="122" pdb_beg="122" seq_end="181" pdb_end="181" type="1"/>
<REGION seq_beg="184" pdb_beg="184" seq_end="242" pdb_end="242" type="1"/>
<REGION seq_beg="252" pdb_beg="252" seq_end="271" pdb_end="271" type="1"/>
<REGION seq_beg="272" pdb_beg="272" seq_end="293" pdb_end="293" type="H"/>
<REGION seq_beg="294" pdb_beg="294" seq_end="299" pdb_end="299" type="2"/>
<REGION seq_beg="300" pdb_beg="300" seq_end="322" pdb_end="322" type="H"/>
<REGION seq_beg="323" pdb_beg="323" seq_end="332" pdb_end="332" type="1"/>
<REGION seq_beg="333" pdb_beg="333" seq_end="353" pdb_end="353" type="H"/>
<REGION seq_beg="354" pdb_beg="354" seq_end="361" pdb_end="361" type="F"/>
<REGION seq_beg="362" pdb_beg="362" seq_end="362" pdb_end="362" type="2"/>
</CHAIN>
</pdbtm>
Overview
5x5y
PDB code:5x5y
Chain(s):B[0], A[0], G[6], F[6]
PDBTM type:Tm_Alpha
Title:A MEMBRANE PROTEIN COMPLEX
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