Content of 5t4d <?xml version="1.0" encoding="iso-8859-1"?> <pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm.enzim.hu/data/pdbtm.xsd pdbtm.xsd" ID="5t4d" TMP="yes"> <COPYRIGHT> All information, data and files are copyright. PDBTM database is produced in the Institute of Enzymology, Budapest, Hungary. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed from entries. Usage by and for commercial entities requires a license agreement (send an email to pdbtm at enzim dot hu). </COPYRIGHT> <CREATE_DATE>2016-12-12</CREATE_DATE> <MODIFICATION> <DATE>2016-12-12</DATE> <DESCR>Interfacial helix detected.</DESCR> </MODIFICATION> <RAWRES> <TMRES>68.33</TMRES> <TMTYPE>Tm_Alpha</TMTYPE> <SPRES>Unknown</SPRES> <PDBKWRES>no</PDBKWRES> </RAWRES> <MEMBRANE> <NORMAL X="0.00058084" Y="0.00008505" Z="18.00000000"/> <TMATRIX> <ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-116.69802094"/> <ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-116.69994354"/> <ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-129.86949158"/> </TMATRIX> </MEMBRANE> <CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha"> <SEQ> GAMGSRGLWG TRLMEESSTN REKYLKSVLR ELVTYLLFLI VLCILTYGMM SSNVYYYTRM MSQLFLDTPV SKTEKTNFKT LSSMEDFWKF TEGSLLDGLY WKMQPSNQTE ADNRSFIFYE NLLLGVPRIR QLRVRNGSCS IPQDLRDEIK ECYDVYSVSS EDRAPFGPRN GTAWIYTSEK DLNGSSHWGI IATYSGAGYY LDLSRTREET AAQVASLKKN VWLDRGTRAT FIDFSVYNAN INLFCVVRLL VEFPATGGVI PSWQFQPLKL IRYVTTFDFF LAACEIIFCF FIFYYVVEEI LEIRIHKLHY FRSFWNCLDV VIVVLSVVAI GINIYRTSNV EVLLQFLEDQ NTFPNFEHLA YWQIQFNNIA AVTVFFVWIK LFKFINFNRT MSQLSTTMSR CAKDLFGFAI MFFIIFLAYA QLAYLVFGTQ VDDFSTFQEC IFTQFRIILG DINFAEIEEA NRVLGPIYFT TFVFFMFFIL LNMFLAIIND TYSEVKSDLA QQKAEMELSD </SEQ> <REGION seq_beg="24" pdb_beg="216" seq_end="27" pdb_end="219" type="2"/> <REGION seq_beg="28" pdb_beg="220" seq_end="50" pdb_end="242" type="H"/> <REGION seq_beg="51" pdb_beg="243" seq_end="103" pdb_end="295" type="1"/> <REGION seq_beg="110" pdb_beg="302" seq_end="279" pdb_end="471" type="1"/> <REGION seq_beg="280" pdb_beg="472" seq_end="301" pdb_end="493" type="H"/> <REGION seq_beg="312" pdb_beg="504" seq_end="312" pdb_end="504" type="2"/> <REGION seq_beg="313" pdb_beg="505" seq_end="336" pdb_end="528" type="H"/> <REGION seq_beg="337" pdb_beg="529" seq_end="362" pdb_end="554" type="1"/> <REGION seq_beg="363" pdb_beg="555" seq_end="388" pdb_end="580" type="H"/> <REGION seq_beg="389" pdb_beg="581" seq_end="397" pdb_end="589" type="F"/> <REGION seq_beg="398" pdb_beg="590" seq_end="428" pdb_end="620" type="H"/> <REGION seq_beg="429" pdb_beg="621" seq_end="436" pdb_end="628" type="1"/> <REGION seq_beg="437" pdb_beg="629" seq_end="454" pdb_end="646" type="L"/> <REGION seq_beg="455" pdb_beg="647" seq_end="460" pdb_end="652" type="F"/> <REGION seq_beg="461" pdb_beg="653" seq_end="461" pdb_end="653" type="1"/> <REGION seq_beg="462" pdb_beg="654" seq_end="489" pdb_end="681" type="H"/> <REGION seq_beg="490" pdb_beg="682" seq_end="502" pdb_end="694" type="2"/> </CHAIN> <CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha"> <SEQ> GAMGSRGLWG TRLMEESSTN REKYLKSVLR ELVTYLLFLI VLCILTYGMM SSNVYYYTRM MSQLFLDTPV SKTEKTNFKT LSSMEDFWKF TEGSLLDGLY WKMQPSNQTE ADNRSFIFYE NLLLGVPRIR QLRVRNGSCS IPQDLRDEIK ECYDVYSVSS EDRAPFGPRN GTAWIYTSEK DLNGSSHWGI IATYSGAGYY LDLSRTREET AAQVASLKKN VWLDRGTRAT FIDFSVYNAN INLFCVVRLL VEFPATGGVI PSWQFQPLKL IRYVTTFDFF LAACEIIFCF FIFYYVVEEI LEIRIHKLHY FRSFWNCLDV VIVVLSVVAI GINIYRTSNV EVLLQFLEDQ NTFPNFEHLA YWQIQFNNIA AVTVFFVWIK LFKFINFNRT MSQLSTTMSR CAKDLFGFAI MFFIIFLAYA QLAYLVFGTQ VDDFSTFQEC IFTQFRIILG DINFAEIEEA NRVLGPIYFT TFVFFMFFIL LNMFLAIIND TYSEVKSDLA QQKAEMELSD </SEQ> <REGION seq_beg="24" pdb_beg="216" seq_end="27" pdb_end="219" type="2"/> <REGION seq_beg="28" pdb_beg="220" seq_end="50" pdb_end="242" type="H"/> <REGION seq_beg="51" pdb_beg="243" seq_end="103" pdb_end="295" type="1"/> <REGION seq_beg="110" pdb_beg="302" seq_end="279" pdb_end="471" type="1"/> <REGION seq_beg="280" pdb_beg="472" seq_end="301" pdb_end="493" type="H"/> <REGION seq_beg="312" pdb_beg="504" seq_end="312" pdb_end="504" type="2"/> <REGION seq_beg="313" pdb_beg="505" seq_end="336" pdb_end="528" type="H"/> <REGION seq_beg="337" pdb_beg="529" seq_end="362" pdb_end="554" type="1"/> <REGION seq_beg="363" pdb_beg="555" seq_end="388" pdb_end="580" type="H"/> <REGION seq_beg="389" pdb_beg="581" seq_end="397" pdb_end="589" type="F"/> <REGION seq_beg="398" pdb_beg="590" seq_end="428" pdb_end="620" type="H"/> <REGION seq_beg="429" pdb_beg="621" seq_end="436" pdb_end="628" type="1"/> <REGION seq_beg="437" pdb_beg="629" seq_end="454" pdb_end="646" type="L"/> <REGION seq_beg="455" pdb_beg="647" seq_end="460" pdb_end="652" type="F"/> <REGION seq_beg="461" pdb_beg="653" seq_end="461" pdb_end="653" type="1"/> <REGION seq_beg="462" pdb_beg="654" seq_end="489" pdb_end="681" type="H"/> <REGION seq_beg="490" pdb_beg="682" seq_end="502" pdb_end="694" type="2"/> </CHAIN> <CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha"> <SEQ> GAMGSRGLWG TRLMEESSTN REKYLKSVLR ELVTYLLFLI VLCILTYGMM SSNVYYYTRM MSQLFLDTPV SKTEKTNFKT LSSMEDFWKF TEGSLLDGLY WKMQPSNQTE ADNRSFIFYE NLLLGVPRIR QLRVRNGSCS IPQDLRDEIK ECYDVYSVSS EDRAPFGPRN GTAWIYTSEK DLNGSSHWGI IATYSGAGYY LDLSRTREET AAQVASLKKN VWLDRGTRAT FIDFSVYNAN INLFCVVRLL VEFPATGGVI PSWQFQPLKL IRYVTTFDFF LAACEIIFCF FIFYYVVEEI LEIRIHKLHY FRSFWNCLDV VIVVLSVVAI GINIYRTSNV EVLLQFLEDQ NTFPNFEHLA YWQIQFNNIA AVTVFFVWIK LFKFINFNRT MSQLSTTMSR CAKDLFGFAI MFFIIFLAYA QLAYLVFGTQ VDDFSTFQEC IFTQFRIILG DINFAEIEEA NRVLGPIYFT TFVFFMFFIL LNMFLAIIND TYSEVKSDLA QQKAEMELSD </SEQ> <REGION seq_beg="24" pdb_beg="216" seq_end="27" pdb_end="219" type="2"/> <REGION seq_beg="28" pdb_beg="220" seq_end="50" pdb_end="242" type="H"/> <REGION seq_beg="51" pdb_beg="243" seq_end="103" pdb_end="295" type="1"/> <REGION seq_beg="110" pdb_beg="302" seq_end="279" pdb_end="471" type="1"/> <REGION seq_beg="280" pdb_beg="472" seq_end="301" pdb_end="493" type="H"/> <REGION seq_beg="312" pdb_beg="504" seq_end="312" pdb_end="504" type="2"/> <REGION seq_beg="313" pdb_beg="505" seq_end="336" pdb_end="528" type="H"/> <REGION seq_beg="337" pdb_beg="529" seq_end="362" pdb_end="554" type="1"/> <REGION seq_beg="363" pdb_beg="555" seq_end="388" pdb_end="580" type="H"/> <REGION seq_beg="389" pdb_beg="581" seq_end="397" pdb_end="589" type="F"/> <REGION seq_beg="398" pdb_beg="590" seq_end="428" pdb_end="620" type="H"/> <REGION seq_beg="429" pdb_beg="621" seq_end="436" pdb_end="628" type="1"/> <REGION seq_beg="437" pdb_beg="629" seq_end="454" pdb_end="646" type="L"/> <REGION seq_beg="455" pdb_beg="647" seq_end="460" pdb_end="652" type="F"/> <REGION seq_beg="461" pdb_beg="653" seq_end="461" pdb_end="653" type="1"/> <REGION seq_beg="462" pdb_beg="654" seq_end="489" pdb_end="681" type="H"/> <REGION seq_beg="490" pdb_beg="682" seq_end="502" pdb_end="694" type="2"/> </CHAIN> <CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha"> <SEQ> GAMGSRGLWG TRLMEESSTN REKYLKSVLR ELVTYLLFLI VLCILTYGMM SSNVYYYTRM MSQLFLDTPV SKTEKTNFKT LSSMEDFWKF TEGSLLDGLY WKMQPSNQTE ADNRSFIFYE NLLLGVPRIR QLRVRNGSCS IPQDLRDEIK ECYDVYSVSS EDRAPFGPRN GTAWIYTSEK DLNGSSHWGI IATYSGAGYY LDLSRTREET AAQVASLKKN VWLDRGTRAT FIDFSVYNAN INLFCVVRLL VEFPATGGVI PSWQFQPLKL IRYVTTFDFF LAACEIIFCF FIFYYVVEEI LEIRIHKLHY FRSFWNCLDV VIVVLSVVAI GINIYRTSNV EVLLQFLEDQ NTFPNFEHLA YWQIQFNNIA AVTVFFVWIK LFKFINFNRT MSQLSTTMSR CAKDLFGFAI MFFIIFLAYA QLAYLVFGTQ VDDFSTFQEC IFTQFRIILG DINFAEIEEA NRVLGPIYFT TFVFFMFFIL LNMFLAIIND TYSEVKSDLA QQKAEMELSD </SEQ> <REGION seq_beg="24" pdb_beg="216" seq_end="27" pdb_end="219" type="2"/> <REGION seq_beg="28" pdb_beg="220" seq_end="50" pdb_end="242" type="H"/> <REGION seq_beg="51" pdb_beg="243" seq_end="103" pdb_end="295" type="1"/> <REGION seq_beg="110" pdb_beg="302" seq_end="279" pdb_end="471" type="1"/> <REGION seq_beg="280" pdb_beg="472" seq_end="301" pdb_end="493" type="H"/> <REGION seq_beg="312" pdb_beg="504" seq_end="312" pdb_end="504" type="2"/> <REGION seq_beg="313" pdb_beg="505" seq_end="336" pdb_end="528" type="H"/> <REGION seq_beg="337" pdb_beg="529" seq_end="362" pdb_end="554" type="1"/> <REGION seq_beg="363" pdb_beg="555" seq_end="388" pdb_end="580" type="H"/> <REGION seq_beg="389" pdb_beg="581" seq_end="397" pdb_end="589" type="F"/> <REGION seq_beg="398" pdb_beg="590" seq_end="428" pdb_end="620" type="H"/> <REGION seq_beg="429" pdb_beg="621" seq_end="436" pdb_end="628" type="1"/> <REGION seq_beg="437" pdb_beg="629" seq_end="454" pdb_end="646" type="L"/> <REGION seq_beg="455" pdb_beg="647" seq_end="460" pdb_end="652" type="F"/> <REGION seq_beg="461" pdb_beg="653" seq_end="461" pdb_end="653" type="1"/> <REGION seq_beg="462" pdb_beg="654" seq_end="489" pdb_end="681" type="H"/> <REGION seq_beg="490" pdb_beg="682" seq_end="502" pdb_end="694" type="2"/> </CHAIN> </pdbtm>
| Overview  PDB code: | 5t4d | | | Chain(s): | A[6], B[6], C[6], D[6] | | | PDBTM type: | Tm_Alpha | | | Title: | CRYO-EM STRUCTURE OF POLYCYSTIC KIDNEY DISEASE PROTEIN 2 (PKD2), RESIDUES 198-703 |
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