PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2022-05-13
Number of transmembrane proteins: 7231 (alpha: 6680 , beta: 496 )
Content of 5nc5
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="5nc5" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2017-06-15</CREATE_DATE>
<MODIFICATION>
<DATE>2020-01-31</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2017-06-15</DATE>
<DESCR>PDB ATOM records were modified</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2020-01-31</DATE>
<DESCR>PDB ATOM records were modified</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>73.32</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<BIOMATRIX>
<DELETE CHAINID="H"/>
<DELETE CHAINID="C"/>
<DELETE CHAINID="F"/>
</BIOMATRIX>
<MEMBRANE>
<NORMAL X="-0.05949787" Y="-0.14604580" Z="11.99896431"/>
<TMATRIX>
<ROWX X="0.99998337" Y="0.00475046" Z="-0.00329178" T="-28.07102585"/>
<ROWY X="0.00013067" Y="0.55083102" Z="0.83461678" T="42.17388916"/>
<ROWZ X="0.00577802" Y="-0.83460325" Z="0.55082124" T="22.73503304"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="12" TYPE="alpha">
<SEQ>
MPNFFIDRPI FAWVIAIIIM LAGGLAILKL PVAQYPTIAP PAVTISASYP
GADAKTVQDT VTQVIEQNMN GIDNLMYMSS NSDSTGTVQI TLTFESGTDA
DIAQVQVQNK LQLAMPLLPQ EVQQQGVSVE KSSSSFLMVV GVINTDGTMT
QEDISDYVAA NMKDAISRTS GVGDVQLFGS QYAMRIWMNP NELNKFQLTP
VDVITAIKAQ NAQVAAGQLG GTPPVKGQQL NASIIAQTRL TSTEEFGKIL
LKVNQDGSRV LLRDVAKIEL GGENYDIIAE FNGQPASGLG IKLATGANAL
DTAAAIRAEL AKMEPFFPSG LKIVYPYDTT PFVKISIHEV VKTLVEAIIL
VFLVMYLFLQ NFRATLIPTI AVPVVLLGTF AVLAAFGFSI NTLTMFGMVL
AIGLLVDDAI VVVENVERVM AEEGLPPKEA TRKSMGQIQG ALVGIAMVLS
AVFVPMAFFG GSTGAIYRQF SITIVSAMAL SVLVALILTP ALCATMLKPI
AKGDHGEGKK GFFGWFNRMF EKSTHHYTDS VGGILRSTGR YLVLYLIIVV
GMAYLFVRLP SSFLPDEDQG VFMTMVQLPA GATQERTQKV LNEVTHYYLT
KEKNNVESVF AVNGFGFAGR GQNTGIAFVS LKDWADRPGE ENKVEAITMR
ATRAFSQIKD AMVFAFNLPA IVELGTATGF DFELIDQAGL GHEKLTQARN
QLLAEAAKHP DMLTSVRPNG LEDTPQFKID IDQEKAQALG VSINDINTTL
GAAWGGSYVN DFIDRGRVKK VYVMSEAKYR MLPDDIGDWY VRAADGQMVP
FSAFSSSRWE YGSPRLERYN GLPSMEILGQ AAPGKSTGEA MELMEQLASK
LPTGVGYDWT GMSYQERLSG NQAPSLYAIS LIVVFLCLAA LYESWSIPFS
VMLVVPLGVI GALLAATFRG LTNDVYFQVG LLTTIGLSAK NAILIVEFAK
DLMDKEGKGL IEATLDAVRM RLRPILMTSL AFILGVMPLV ISTGAGSGAQ
NAVGTGVMGG MVTATVLAIF FVPVFFVVVR RRFSRKNEDI EHSHTVDHH
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="10" pdb_end="10" type="1"/>
<REGION seq_beg="11" pdb_beg="11" seq_end="26" pdb_end="26" type="H"/>
<REGION seq_beg="27" pdb_beg="27" seq_end="341" pdb_end="341" type="2"/>
<REGION seq_beg="342" pdb_beg="342" seq_end="356" pdb_end="356" type="H"/>
<REGION seq_beg="357" pdb_beg="357" seq_end="365" pdb_end="365" type="1"/>
<REGION seq_beg="366" pdb_beg="366" seq_end="383" pdb_end="383" type="H"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="395" pdb_end="395" type="2"/>
<REGION seq_beg="396" pdb_beg="396" seq_end="410" pdb_end="410" type="H"/>
<REGION seq_beg="411" pdb_beg="411" seq_end="442" pdb_end="442" type="1"/>
<REGION seq_beg="443" pdb_beg="443" seq_end="458" pdb_end="458" type="H"/>
<REGION seq_beg="459" pdb_beg="459" seq_end="470" pdb_end="470" type="2"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="489" pdb_end="489" type="H"/>
<REGION seq_beg="490" pdb_beg="490" seq_end="511" pdb_end="511" type="1"/>
<REGION seq_beg="512" pdb_beg="512" seq_end="535" pdb_end="535" type="F"/>
<REGION seq_beg="536" pdb_beg="536" seq_end="543" pdb_end="543" type="1"/>
<REGION seq_beg="544" pdb_beg="544" seq_end="559" pdb_end="559" type="H"/>
<REGION seq_beg="560" pdb_beg="560" seq_end="873" pdb_end="873" type="2"/>
<REGION seq_beg="874" pdb_beg="874" seq_end="888" pdb_end="888" type="H"/>
<REGION seq_beg="889" pdb_beg="889" seq_end="901" pdb_end="901" type="1"/>
<REGION seq_beg="902" pdb_beg="902" seq_end="919" pdb_end="919" type="H"/>
<REGION seq_beg="920" pdb_beg="920" seq_end="926" pdb_end="926" type="2"/>
<REGION seq_beg="927" pdb_beg="927" seq_end="941" pdb_end="941" type="H"/>
<REGION seq_beg="942" pdb_beg="942" seq_end="976" pdb_end="976" type="1"/>
<REGION seq_beg="977" pdb_beg="977" seq_end="991" pdb_end="991" type="H"/>
<REGION seq_beg="992" pdb_beg="992" seq_end="1003" pdb_end="1003" type="2"/>
<REGION seq_beg="1004" pdb_beg="1004" seq_end="1018" pdb_end="1018" type="H"/>
<REGION seq_beg="1019" pdb_beg="1019" seq_end="1032" pdb_end="1032" type="F"/>
<REGION seq_beg="1033" pdb_beg="1033" seq_end="1044" pdb_end="1044" type="1"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="12" TYPE="alpha">
<SEQ>
MPNFFIDRPI FAWVIAIIIM LAGGLAILKL PVAQYPTIAP PAVTISASYP
GADAKTVQDT VTQVIEQNMN GIDNLMYMSS NSDSTGTVQI TLTFESGTDA
DIAQVQVQNK LQLAMPLLPQ EVQQQGVSVE KSSSSFLMVV GVINTDGTMT
QEDISDYVAA NMKDAISRTS GVGDVQLFGS QYAMRIWMNP NELNKFQLTP
VDVITAIKAQ NAQVAAGQLG GTPPVKGQQL NASIIAQTRL TSTEEFGKIL
LKVNQDGSRV LLRDVAKIEL GGENYDIIAE FNGQPASGLG IKLATGANAL
DTAAAIRAEL AKMEPFFPSG LKIVYPYDTT PFVKISIHEV VKTLVEAIIL
VFLVMYLFLQ NFRATLIPTI AVPVVLLGTF AVLAAFGFSI NTLTMFGMVL
AIGLLVDDAI VVVENVERVM AEEGLPPKEA TRKSMGQIQG ALVGIAMVLS
AVFVPMAFFG GSTGAIYRQF SITIVSAMAL SVLVALILTP ALCATMLKPI
AKGDHGEGKK GFFGWFNRMF EKSTHHYTDS VGGILRSTGR YLVLYLIIVV
GMAYLFVRLP SSFLPDEDQG VFMTMVQLPA GATQERTQKV LNEVTHYYLT
KEKNNVESVF AVNGFGFAGR GQNTGIAFVS LKDWADRPGE ENKVEAITMR
ATRAFSQIKD AMVFAFNLPA IVELGTATGF DFELIDQAGL GHEKLTQARN
QLLAEAAKHP DMLTSVRPNG LEDTPQFKID IDQEKAQALG VSINDINTTL
GAAWGGSYVN DFIDRGRVKK VYVMSEAKYR MLPDDIGDWY VRAADGQMVP
FSAFSSSRWE YGSPRLERYN GLPSMEILGQ AAPGKSTGEA MELMEQLASK
LPTGVGYDWT GMSYQERLSG NQAPSLYAIS LIVVFLCLAA LYESWSIPFS
VMLVVPLGVI GALLAATFRG LTNDVYFQVG LLTTIGLSAK NAILIVEFAK
DLMDKEGKGL IEATLDAVRM RLRPILMTSL AFILGVMPLV ISTGAGSGAQ
NAVGTGVMGG MVTATVLAIF FVPVFFVVVR RRFSRKNEDI EHSHTVDHH
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="10" pdb_end="10" type="1"/>
<REGION seq_beg="11" pdb_beg="11" seq_end="25" pdb_end="25" type="H"/>
<REGION seq_beg="26" pdb_beg="26" seq_end="341" pdb_end="341" type="2"/>
<REGION seq_beg="342" pdb_beg="342" seq_end="357" pdb_end="357" type="H"/>
<REGION seq_beg="358" pdb_beg="358" seq_end="365" pdb_end="365" type="1"/>
<REGION seq_beg="366" pdb_beg="366" seq_end="383" pdb_end="383" type="H"/>
<REGION seq_beg="384" pdb_beg="384" seq_end="397" pdb_end="397" type="2"/>
<REGION seq_beg="398" pdb_beg="398" seq_end="412" pdb_end="412" type="H"/>
<REGION seq_beg="413" pdb_beg="413" seq_end="441" pdb_end="441" type="1"/>
<REGION seq_beg="442" pdb_beg="442" seq_end="455" pdb_end="455" type="H"/>
<REGION seq_beg="456" pdb_beg="456" seq_end="471" pdb_end="471" type="2"/>
<REGION seq_beg="472" pdb_beg="472" seq_end="489" pdb_end="489" type="H"/>
<REGION seq_beg="490" pdb_beg="490" seq_end="510" pdb_end="510" type="1"/>
<REGION seq_beg="511" pdb_beg="511" seq_end="535" pdb_end="535" type="F"/>
<REGION seq_beg="536" pdb_beg="536" seq_end="539" pdb_end="539" type="1"/>
<REGION seq_beg="540" pdb_beg="540" seq_end="555" pdb_end="555" type="H"/>
<REGION seq_beg="556" pdb_beg="556" seq_end="876" pdb_end="876" type="2"/>
<REGION seq_beg="877" pdb_beg="877" seq_end="891" pdb_end="891" type="H"/>
<REGION seq_beg="892" pdb_beg="892" seq_end="895" pdb_end="895" type="1"/>
<REGION seq_beg="896" pdb_beg="896" seq_end="915" pdb_end="915" type="H"/>
<REGION seq_beg="916" pdb_beg="916" seq_end="929" pdb_end="929" type="2"/>
<REGION seq_beg="930" pdb_beg="930" seq_end="944" pdb_end="944" type="H"/>
<REGION seq_beg="945" pdb_beg="945" seq_end="974" pdb_end="974" type="1"/>
<REGION seq_beg="975" pdb_beg="975" seq_end="988" pdb_end="988" type="H"/>
<REGION seq_beg="989" pdb_beg="989" seq_end="1004" pdb_end="1004" type="2"/>
<REGION seq_beg="1005" pdb_beg="1005" seq_end="1022" pdb_end="1022" type="H"/>
<REGION seq_beg="1023" pdb_beg="1023" seq_end="1032" pdb_end="1032" type="F"/>
<REGION seq_beg="1033" pdb_beg="1033" seq_end="1033" pdb_end="1033" type="1"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="0" TYPE="non_tm">
<SEQ>
MRGSHHHHHH GSDLGKKLLE AARAGRDDEV RILMANGADV NAADVVGWTP
LHLAAYWGHL EIVEVLLKNG ADVNAYDTLG STPLHLAAHF GHLEIVEVLL
KNGADVNAKD DNGITPLHLA ANRGHLEIVE VLLKYGADVN AQDKFGKTAF
DISINNGNED LAEILQKLN
</SEQ>
<REGION seq_beg="11" pdb_beg="11" seq_end="166" pdb_end="166" type="2"/>
</CHAIN>
<CHAIN CHAINID="E" NUM_TM="0" TYPE="non_tm">
<SEQ>
MRGSHHHHHH GSDLGKKLLE AARAGRDDEV RILMANGADV NAADVVGWTP
LHLAAYWGHL EIVEVLLKNG ADVNAYDTLG STPLHLAAHF GHLEIVEVLL
KNGADVNAKD DNGITPLHLA ANRGHLEIVE VLLKYGADVN AQDKFGKTAF
DISINNGNED LAEILQKLN
</SEQ>
<REGION seq_beg="15" pdb_beg="15" seq_end="166" pdb_end="166" type="2"/>
</CHAIN>
<CHAIN CHAINID="G" NUM_TM="1" TYPE="alpha">
<SEQ>
MLELLKSLVF AVIMVPVVMA IILGLIYGLG EVFNIFSGVG KKDQPGQNH
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="1" pdb_end="1" type="2"/>
<REGION seq_beg="2" pdb_beg="2" seq_end="22" pdb_end="22" type="H"/>
<REGION seq_beg="23" pdb_beg="23" seq_end="34" pdb_end="34" type="F"/>
<REGION seq_beg="35" pdb_beg="35" seq_end="36" pdb_end="36" type="1"/>
</CHAIN>
</pdbtm>
Overview
5nc5
PDB code:5nc5
Chain(s):
PDBTM type:Tm_Alpha
Title:CRYSTAL STRUCTURE OF ACRBZ IN COMPLEX WITH ANTIBIOTIC PUROMYCIN
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