PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2017-06-16
Number of transmembrane proteins: 3227 (alpha: 2848 , beta: 366 )
Content of 5is0
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<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="5is0" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2016-05-30</CREATE_DATE>
<MODIFICATION>
<DATE>2016-05-30</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>68.95</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="-0.00214247" Y="0.00395825" Z="11.75000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-116.68747711"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-116.71998596"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-93.58600616"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
AMGSRLYDRR SIFDAVAQSN CQELESLLPF LQRSKKRLTD SEFKDPETGK
TCLLKAMLNL HNGQNDTIAL LLDVARKTDS LKQFVNASYT DSYYKGQTAL
HIAIERRNMT LVTLLVENGA DVQAAANGDF FKKTKGRPGF YFGELPLSLA
ACTNQLAIVK FLLQNSWQPA DISARDSVGN TVLHALVEVA DNTVDNTKFV
TSMYNEILIL GAKLHPTLKL EEITNRKGLT PLALAASSGK IGVLAYILQR
EIHEPECRHL SRKFTEWAYG PVHSSLYDLS CIDTCEKNSV LEVIAYSSSE
TPNRHDMLLV EPLNRLLQDK WDRFVKRIFY FNFFVYCLYM IIFTAAAYYR
PVEGLPPYKL KNTVGDYFRV TGEILSVSGG VYFFFRGIQY FLQRRPSLKS
LFVDSYSEIL FFVQSLFMLV SVVLYFSQRK EYVASMVFSL AMGWTNMLYY
TRGFQQMGIY AVMIEKMILR DLCRFMFVYL VFLFGFSTAV VTLIEDGKYN
SLYSTCLELF KFTIGMGDLE FTENYDFKAV FIILLLAYVI LTYILLLNML
IALMGETVNK IAQESKNIWK LQRAITILDT EKSFLKCMRK AFRSGKLLQV
GFTPDGKDDY RWCFRVDEVN WTTWNTNVGI INEDPG
</SEQ>
<REGION seq_beg="230" pdb_beg="335" seq_end="334" pdb_end="439" type="2"/>
<REGION seq_beg="335" pdb_beg="440" seq_end="348" pdb_end="453" type="H"/>
<REGION seq_beg="349" pdb_beg="454" seq_end="368" pdb_end="473" type="1"/>
<REGION seq_beg="369" pdb_beg="474" seq_end="385" pdb_end="490" type="H"/>
<REGION seq_beg="386" pdb_beg="491" seq_end="410" pdb_end="515" type="2"/>
<REGION seq_beg="411" pdb_beg="516" seq_end="426" pdb_end="531" type="H"/>
<REGION seq_beg="427" pdb_beg="532" seq_end="431" pdb_end="536" type="1"/>
<REGION seq_beg="432" pdb_beg="537" seq_end="447" pdb_end="552" type="H"/>
<REGION seq_beg="448" pdb_beg="553" seq_end="454" pdb_end="559" type="2"/>
<REGION seq_beg="455" pdb_beg="560" seq_end="471" pdb_end="576" type="F"/>
<REGION seq_beg="472" pdb_beg="577" seq_end="476" pdb_end="581" type="2"/>
<REGION seq_beg="477" pdb_beg="582" seq_end="493" pdb_end="598" type="H"/>
<REGION seq_beg="494" pdb_beg="599" seq_end="502" pdb_end="630" type="1"/>
<REGION seq_beg="503" pdb_beg="631" seq_end="519" pdb_end="647" type="L"/>
<REGION seq_beg="520" pdb_beg="648" seq_end="529" pdb_end="657" type="1"/>
<REGION seq_beg="530" pdb_beg="658" seq_end="548" pdb_end="676" type="H"/>
<REGION seq_beg="549" pdb_beg="677" seq_end="583" pdb_end="711" type="F"/>
<REGION seq_beg="584" pdb_beg="712" seq_end="623" pdb_end="751" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
AMGSRLYDRR SIFDAVAQSN CQELESLLPF LQRSKKRLTD SEFKDPETGK
TCLLKAMLNL HNGQNDTIAL LLDVARKTDS LKQFVNASYT DSYYKGQTAL
HIAIERRNMT LVTLLVENGA DVQAAANGDF FKKTKGRPGF YFGELPLSLA
ACTNQLAIVK FLLQNSWQPA DISARDSVGN TVLHALVEVA DNTVDNTKFV
TSMYNEILIL GAKLHPTLKL EEITNRKGLT PLALAASSGK IGVLAYILQR
EIHEPECRHL SRKFTEWAYG PVHSSLYDLS CIDTCEKNSV LEVIAYSSSE
TPNRHDMLLV EPLNRLLQDK WDRFVKRIFY FNFFVYCLYM IIFTAAAYYR
PVEGLPPYKL KNTVGDYFRV TGEILSVSGG VYFFFRGIQY FLQRRPSLKS
LFVDSYSEIL FFVQSLFMLV SVVLYFSQRK EYVASMVFSL AMGWTNMLYY
TRGFQQMGIY AVMIEKMILR DLCRFMFVYL VFLFGFSTAV VTLIEDGKYN
SLYSTCLELF KFTIGMGDLE FTENYDFKAV FIILLLAYVI LTYILLLNML
IALMGETVNK IAQESKNIWK LQRAITILDT EKSFLKCMRK AFRSGKLLQV
GFTPDGKDDY RWCFRVDEVN WTTWNTNVGI INEDPG
</SEQ>
<REGION seq_beg="230" pdb_beg="335" seq_end="334" pdb_end="439" type="2"/>
<REGION seq_beg="335" pdb_beg="440" seq_end="348" pdb_end="453" type="H"/>
<REGION seq_beg="349" pdb_beg="454" seq_end="368" pdb_end="473" type="1"/>
<REGION seq_beg="369" pdb_beg="474" seq_end="385" pdb_end="490" type="H"/>
<REGION seq_beg="386" pdb_beg="491" seq_end="410" pdb_end="515" type="2"/>
<REGION seq_beg="411" pdb_beg="516" seq_end="426" pdb_end="531" type="H"/>
<REGION seq_beg="427" pdb_beg="532" seq_end="431" pdb_end="536" type="1"/>
<REGION seq_beg="432" pdb_beg="537" seq_end="447" pdb_end="552" type="H"/>
<REGION seq_beg="448" pdb_beg="553" seq_end="454" pdb_end="559" type="2"/>
<REGION seq_beg="455" pdb_beg="560" seq_end="471" pdb_end="576" type="F"/>
<REGION seq_beg="472" pdb_beg="577" seq_end="476" pdb_end="581" type="2"/>
<REGION seq_beg="477" pdb_beg="582" seq_end="493" pdb_end="598" type="H"/>
<REGION seq_beg="494" pdb_beg="599" seq_end="502" pdb_end="630" type="1"/>
<REGION seq_beg="503" pdb_beg="631" seq_end="519" pdb_end="647" type="L"/>
<REGION seq_beg="520" pdb_beg="648" seq_end="528" pdb_end="656" type="1"/>
<REGION seq_beg="529" pdb_beg="657" seq_end="548" pdb_end="676" type="H"/>
<REGION seq_beg="549" pdb_beg="677" seq_end="583" pdb_end="711" type="F"/>
<REGION seq_beg="584" pdb_beg="712" seq_end="623" pdb_end="751" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
AMGSRLYDRR SIFDAVAQSN CQELESLLPF LQRSKKRLTD SEFKDPETGK
TCLLKAMLNL HNGQNDTIAL LLDVARKTDS LKQFVNASYT DSYYKGQTAL
HIAIERRNMT LVTLLVENGA DVQAAANGDF FKKTKGRPGF YFGELPLSLA
ACTNQLAIVK FLLQNSWQPA DISARDSVGN TVLHALVEVA DNTVDNTKFV
TSMYNEILIL GAKLHPTLKL EEITNRKGLT PLALAASSGK IGVLAYILQR
EIHEPECRHL SRKFTEWAYG PVHSSLYDLS CIDTCEKNSV LEVIAYSSSE
TPNRHDMLLV EPLNRLLQDK WDRFVKRIFY FNFFVYCLYM IIFTAAAYYR
PVEGLPPYKL KNTVGDYFRV TGEILSVSGG VYFFFRGIQY FLQRRPSLKS
LFVDSYSEIL FFVQSLFMLV SVVLYFSQRK EYVASMVFSL AMGWTNMLYY
TRGFQQMGIY AVMIEKMILR DLCRFMFVYL VFLFGFSTAV VTLIEDGKYN
SLYSTCLELF KFTIGMGDLE FTENYDFKAV FIILLLAYVI LTYILLLNML
IALMGETVNK IAQESKNIWK LQRAITILDT EKSFLKCMRK AFRSGKLLQV
GFTPDGKDDY RWCFRVDEVN WTTWNTNVGI INEDPG
</SEQ>
<REGION seq_beg="230" pdb_beg="335" seq_end="334" pdb_end="439" type="2"/>
<REGION seq_beg="335" pdb_beg="440" seq_end="348" pdb_end="453" type="H"/>
<REGION seq_beg="349" pdb_beg="454" seq_end="368" pdb_end="473" type="1"/>
<REGION seq_beg="369" pdb_beg="474" seq_end="385" pdb_end="490" type="H"/>
<REGION seq_beg="386" pdb_beg="491" seq_end="410" pdb_end="515" type="2"/>
<REGION seq_beg="411" pdb_beg="516" seq_end="426" pdb_end="531" type="H"/>
<REGION seq_beg="427" pdb_beg="532" seq_end="431" pdb_end="536" type="1"/>
<REGION seq_beg="432" pdb_beg="537" seq_end="447" pdb_end="552" type="H"/>
<REGION seq_beg="448" pdb_beg="553" seq_end="454" pdb_end="559" type="2"/>
<REGION seq_beg="455" pdb_beg="560" seq_end="471" pdb_end="576" type="F"/>
<REGION seq_beg="472" pdb_beg="577" seq_end="476" pdb_end="581" type="2"/>
<REGION seq_beg="477" pdb_beg="582" seq_end="493" pdb_end="598" type="H"/>
<REGION seq_beg="494" pdb_beg="599" seq_end="502" pdb_end="630" type="1"/>
<REGION seq_beg="503" pdb_beg="631" seq_end="519" pdb_end="647" type="L"/>
<REGION seq_beg="520" pdb_beg="648" seq_end="528" pdb_end="656" type="1"/>
<REGION seq_beg="529" pdb_beg="657" seq_end="548" pdb_end="676" type="H"/>
<REGION seq_beg="549" pdb_beg="677" seq_end="583" pdb_end="711" type="F"/>
<REGION seq_beg="584" pdb_beg="712" seq_end="623" pdb_end="751" type="2"/>
</CHAIN>
<CHAIN CHAINID="E" NUM_TM="6" TYPE="alpha">
<SEQ>
AMGSRLYDRR SIFDAVAQSN CQELESLLPF LQRSKKRLTD SEFKDPETGK
TCLLKAMLNL HNGQNDTIAL LLDVARKTDS LKQFVNASYT DSYYKGQTAL
HIAIERRNMT LVTLLVENGA DVQAAANGDF FKKTKGRPGF YFGELPLSLA
ACTNQLAIVK FLLQNSWQPA DISARDSVGN TVLHALVEVA DNTVDNTKFV
TSMYNEILIL GAKLHPTLKL EEITNRKGLT PLALAASSGK IGVLAYILQR
EIHEPECRHL SRKFTEWAYG PVHSSLYDLS CIDTCEKNSV LEVIAYSSSE
TPNRHDMLLV EPLNRLLQDK WDRFVKRIFY FNFFVYCLYM IIFTAAAYYR
PVEGLPPYKL KNTVGDYFRV TGEILSVSGG VYFFFRGIQY FLQRRPSLKS
LFVDSYSEIL FFVQSLFMLV SVVLYFSQRK EYVASMVFSL AMGWTNMLYY
TRGFQQMGIY AVMIEKMILR DLCRFMFVYL VFLFGFSTAV VTLIEDGKYN
SLYSTCLELF KFTIGMGDLE FTENYDFKAV FIILLLAYVI LTYILLLNML
IALMGETVNK IAQESKNIWK LQRAITILDT EKSFLKCMRK AFRSGKLLQV
GFTPDGKDDY RWCFRVDEVN WTTWNTNVGI INEDPG
</SEQ>
<REGION seq_beg="230" pdb_beg="335" seq_end="334" pdb_end="439" type="2"/>
<REGION seq_beg="335" pdb_beg="440" seq_end="348" pdb_end="453" type="H"/>
<REGION seq_beg="349" pdb_beg="454" seq_end="368" pdb_end="473" type="1"/>
<REGION seq_beg="369" pdb_beg="474" seq_end="385" pdb_end="490" type="H"/>
<REGION seq_beg="386" pdb_beg="491" seq_end="410" pdb_end="515" type="2"/>
<REGION seq_beg="411" pdb_beg="516" seq_end="426" pdb_end="531" type="H"/>
<REGION seq_beg="427" pdb_beg="532" seq_end="431" pdb_end="536" type="1"/>
<REGION seq_beg="432" pdb_beg="537" seq_end="447" pdb_end="552" type="H"/>
<REGION seq_beg="448" pdb_beg="553" seq_end="454" pdb_end="559" type="2"/>
<REGION seq_beg="455" pdb_beg="560" seq_end="471" pdb_end="576" type="F"/>
<REGION seq_beg="472" pdb_beg="577" seq_end="476" pdb_end="581" type="2"/>
<REGION seq_beg="477" pdb_beg="582" seq_end="493" pdb_end="598" type="H"/>
<REGION seq_beg="494" pdb_beg="599" seq_end="502" pdb_end="630" type="1"/>
<REGION seq_beg="503" pdb_beg="631" seq_end="519" pdb_end="647" type="L"/>
<REGION seq_beg="520" pdb_beg="648" seq_end="529" pdb_end="657" type="1"/>
<REGION seq_beg="530" pdb_beg="658" seq_end="548" pdb_end="676" type="H"/>
<REGION seq_beg="549" pdb_beg="677" seq_end="583" pdb_end="711" type="F"/>
<REGION seq_beg="584" pdb_beg="712" seq_end="623" pdb_end="751" type="2"/>
</CHAIN>
</pdbtm>
Overview
5is0
PDB code:5is0
Chain(s):C[6], B[6], D[6], E[6]
PDBTM type:Tm_Alpha
Title:STRUCTURE OF TRPV1 IN COMPLEX WITH CAPSAZEPINE, DETERMINED IN LIPID NANODISC
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