PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2017-06-16
Number of transmembrane proteins: 3227 (alpha: 2848 , beta: 366 )
Content of 5h3o
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="5h3o" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2017-01-31</CREATE_DATE>
<MODIFICATION>
<DATE>2017-01-31</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>67.39</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<MEMBRANE>
<NORMAL X="0.00567724" Y="-0.00086603" Z="16.75000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-105.59048462"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-104.28574371"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-90.69984436"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
GGGGSMSTAE PAPDPTNPST SGLAPTTNGI GSPPPTASAA TKFSILTKFL
RRKNQVHTTT AQQNEFMQKY MPNGNSNAVQ PAATGGQPAS SDGGSAIEVP
PPKESYAVRI RKYLANYTQD PSTDNFYYWT CVVTVAYIYN LLFVIARQVF
NDLIGPSSQS LCRFYNGTLN STTQVECTYN MLTNMKEMPT YSQYPDLGWS
KYWHFRMLWV FFDLLMDCVY LIDTFLNYRM GYMDQGLVVR EAEKVTKAYW
QSKQYRIDGI SLIPLDYILG WPIPYINWRG LPILRLNRLI RYKRVRNCLE
RTETRSSMPN AFRVVVVVWY IVIIIHWNAC LYFWISEWIG LGTDAWVYGH
LNKQSLPDDI TDTLLRRYVY SFYWSTLILT TIGEVPSPVR NIEYAFVTLD
LMCGVLIFAT IVGNVGSMIS NMSAARTEFQ NKMDGIKQYM ELRKVSKQLE
IRVIKWFDYL WTNKQSLSDQ QVLKVLPDKL QAEIAMQVHF ETLRKVRIFQ
DCEAGLLAEL VLKLQLQVFS PGDFICKKGD IGREMYIVKR GRLQVVDDDG
KKVFVTLQEG SVFGELSILN IAGSKNGNRR TANVRSVGYT DLFVLSKTDL
WNALREYPDA RKLLLAKGRE ILKKDNLLDE NAPEEQKTVE EIAEHLNNAV
KVLQTRMARL IVEHSSTEGK LMKRIEMLEK HLSRYKALAR RQKTMHGVSI
DGGDISTDGV DERVRPPRLR QTKTIDLPTG TESESLLK
</SEQ>
<REGION seq_beg="111" pdb_beg="106" seq_end="128" pdb_end="123" type="2"/>
<REGION seq_beg="129" pdb_beg="124" seq_end="151" pdb_end="146" type="H"/>
<REGION seq_beg="152" pdb_beg="147" seq_end="166" pdb_end="161" type="1"/>
<REGION seq_beg="172" pdb_beg="167" seq_end="203" pdb_end="198" type="1"/>
<REGION seq_beg="204" pdb_beg="199" seq_end="225" pdb_end="220" type="H"/>
<REGION seq_beg="226" pdb_beg="221" seq_end="256" pdb_end="251" type="2"/>
<REGION seq_beg="257" pdb_beg="252" seq_end="274" pdb_end="269" type="H"/>
<REGION seq_beg="275" pdb_beg="270" seq_end="278" pdb_end="273" type="1"/>
<REGION seq_beg="279" pdb_beg="274" seq_end="296" pdb_end="291" type="H"/>
<REGION seq_beg="297" pdb_beg="292" seq_end="303" pdb_end="298" type="F"/>
<REGION seq_beg="304" pdb_beg="299" seq_end="310" pdb_end="305" type="2"/>
<REGION seq_beg="311" pdb_beg="306" seq_end="335" pdb_end="330" type="H"/>
<REGION seq_beg="336" pdb_beg="331" seq_end="368" pdb_end="363" type="1"/>
<REGION seq_beg="369" pdb_beg="364" seq_end="385" pdb_end="380" type="L"/>
<REGION seq_beg="386" pdb_beg="381" seq_end="392" pdb_end="387" type="1"/>
<REGION seq_beg="393" pdb_beg="388" seq_end="420" pdb_end="415" type="H"/>
<REGION seq_beg="421" pdb_beg="416" seq_end="423" pdb_end="418" type="2"/>
<REGION seq_beg="424" pdb_beg="419" seq_end="442" pdb_end="437" type="F"/>
<REGION seq_beg="443" pdb_beg="438" seq_end="625" pdb_end="620" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
GGGGSMSTAE PAPDPTNPST SGLAPTTNGI GSPPPTASAA TKFSILTKFL
RRKNQVHTTT AQQNEFMQKY MPNGNSNAVQ PAATGGQPAS SDGGSAIEVP
PPKESYAVRI RKYLANYTQD PSTDNFYYWT CVVTVAYIYN LLFVIARQVF
NDLIGPSSQS LCRFYNGTLN STTQVECTYN MLTNMKEMPT YSQYPDLGWS
KYWHFRMLWV FFDLLMDCVY LIDTFLNYRM GYMDQGLVVR EAEKVTKAYW
QSKQYRIDGI SLIPLDYILG WPIPYINWRG LPILRLNRLI RYKRVRNCLE
RTETRSSMPN AFRVVVVVWY IVIIIHWNAC LYFWISEWIG LGTDAWVYGH
LNKQSLPDDI TDTLLRRYVY SFYWSTLILT TIGEVPSPVR NIEYAFVTLD
LMCGVLIFAT IVGNVGSMIS NMSAARTEFQ NKMDGIKQYM ELRKVSKQLE
IRVIKWFDYL WTNKQSLSDQ QVLKVLPDKL QAEIAMQVHF ETLRKVRIFQ
DCEAGLLAEL VLKLQLQVFS PGDFICKKGD IGREMYIVKR GRLQVVDDDG
KKVFVTLQEG SVFGELSILN IAGSKNGNRR TANVRSVGYT DLFVLSKTDL
WNALREYPDA RKLLLAKGRE ILKKDNLLDE NAPEEQKTVE EIAEHLNNAV
KVLQTRMARL IVEHSSTEGK LMKRIEMLEK HLSRYKALAR RQKTMHGVSI
DGGDISTDGV DERVRPPRLR QTKTIDLPTG TESESLLK
</SEQ>
<REGION seq_beg="111" pdb_beg="106" seq_end="128" pdb_end="123" type="2"/>
<REGION seq_beg="129" pdb_beg="124" seq_end="151" pdb_end="146" type="H"/>
<REGION seq_beg="152" pdb_beg="147" seq_end="166" pdb_end="161" type="1"/>
<REGION seq_beg="172" pdb_beg="167" seq_end="203" pdb_end="198" type="1"/>
<REGION seq_beg="204" pdb_beg="199" seq_end="225" pdb_end="220" type="H"/>
<REGION seq_beg="226" pdb_beg="221" seq_end="256" pdb_end="251" type="2"/>
<REGION seq_beg="257" pdb_beg="252" seq_end="274" pdb_end="269" type="H"/>
<REGION seq_beg="275" pdb_beg="270" seq_end="278" pdb_end="273" type="1"/>
<REGION seq_beg="279" pdb_beg="274" seq_end="296" pdb_end="291" type="H"/>
<REGION seq_beg="297" pdb_beg="292" seq_end="303" pdb_end="298" type="F"/>
<REGION seq_beg="304" pdb_beg="299" seq_end="310" pdb_end="305" type="2"/>
<REGION seq_beg="311" pdb_beg="306" seq_end="335" pdb_end="330" type="H"/>
<REGION seq_beg="336" pdb_beg="331" seq_end="368" pdb_end="363" type="1"/>
<REGION seq_beg="369" pdb_beg="364" seq_end="385" pdb_end="380" type="L"/>
<REGION seq_beg="386" pdb_beg="381" seq_end="392" pdb_end="387" type="1"/>
<REGION seq_beg="393" pdb_beg="388" seq_end="420" pdb_end="415" type="H"/>
<REGION seq_beg="421" pdb_beg="416" seq_end="423" pdb_end="418" type="2"/>
<REGION seq_beg="424" pdb_beg="419" seq_end="442" pdb_end="437" type="F"/>
<REGION seq_beg="443" pdb_beg="438" seq_end="625" pdb_end="620" type="2"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
GGGGSMSTAE PAPDPTNPST SGLAPTTNGI GSPPPTASAA TKFSILTKFL
RRKNQVHTTT AQQNEFMQKY MPNGNSNAVQ PAATGGQPAS SDGGSAIEVP
PPKESYAVRI RKYLANYTQD PSTDNFYYWT CVVTVAYIYN LLFVIARQVF
NDLIGPSSQS LCRFYNGTLN STTQVECTYN MLTNMKEMPT YSQYPDLGWS
KYWHFRMLWV FFDLLMDCVY LIDTFLNYRM GYMDQGLVVR EAEKVTKAYW
QSKQYRIDGI SLIPLDYILG WPIPYINWRG LPILRLNRLI RYKRVRNCLE
RTETRSSMPN AFRVVVVVWY IVIIIHWNAC LYFWISEWIG LGTDAWVYGH
LNKQSLPDDI TDTLLRRYVY SFYWSTLILT TIGEVPSPVR NIEYAFVTLD
LMCGVLIFAT IVGNVGSMIS NMSAARTEFQ NKMDGIKQYM ELRKVSKQLE
IRVIKWFDYL WTNKQSLSDQ QVLKVLPDKL QAEIAMQVHF ETLRKVRIFQ
DCEAGLLAEL VLKLQLQVFS PGDFICKKGD IGREMYIVKR GRLQVVDDDG
KKVFVTLQEG SVFGELSILN IAGSKNGNRR TANVRSVGYT DLFVLSKTDL
WNALREYPDA RKLLLAKGRE ILKKDNLLDE NAPEEQKTVE EIAEHLNNAV
KVLQTRMARL IVEHSSTEGK LMKRIEMLEK HLSRYKALAR RQKTMHGVSI
DGGDISTDGV DERVRPPRLR QTKTIDLPTG TESESLLK
</SEQ>
<REGION seq_beg="111" pdb_beg="106" seq_end="128" pdb_end="123" type="2"/>
<REGION seq_beg="129" pdb_beg="124" seq_end="151" pdb_end="146" type="H"/>
<REGION seq_beg="152" pdb_beg="147" seq_end="166" pdb_end="161" type="1"/>
<REGION seq_beg="172" pdb_beg="167" seq_end="203" pdb_end="198" type="1"/>
<REGION seq_beg="204" pdb_beg="199" seq_end="225" pdb_end="220" type="H"/>
<REGION seq_beg="226" pdb_beg="221" seq_end="256" pdb_end="251" type="2"/>
<REGION seq_beg="257" pdb_beg="252" seq_end="274" pdb_end="269" type="H"/>
<REGION seq_beg="275" pdb_beg="270" seq_end="278" pdb_end="273" type="1"/>
<REGION seq_beg="279" pdb_beg="274" seq_end="296" pdb_end="291" type="H"/>
<REGION seq_beg="297" pdb_beg="292" seq_end="303" pdb_end="298" type="F"/>
<REGION seq_beg="304" pdb_beg="299" seq_end="310" pdb_end="305" type="2"/>
<REGION seq_beg="311" pdb_beg="306" seq_end="335" pdb_end="330" type="H"/>
<REGION seq_beg="336" pdb_beg="331" seq_end="368" pdb_end="363" type="1"/>
<REGION seq_beg="369" pdb_beg="364" seq_end="385" pdb_end="380" type="L"/>
<REGION seq_beg="386" pdb_beg="381" seq_end="392" pdb_end="387" type="1"/>
<REGION seq_beg="393" pdb_beg="388" seq_end="420" pdb_end="415" type="H"/>
<REGION seq_beg="421" pdb_beg="416" seq_end="423" pdb_end="418" type="2"/>
<REGION seq_beg="424" pdb_beg="419" seq_end="442" pdb_end="437" type="F"/>
<REGION seq_beg="443" pdb_beg="438" seq_end="625" pdb_end="620" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
GGGGSMSTAE PAPDPTNPST SGLAPTTNGI GSPPPTASAA TKFSILTKFL
RRKNQVHTTT AQQNEFMQKY MPNGNSNAVQ PAATGGQPAS SDGGSAIEVP
PPKESYAVRI RKYLANYTQD PSTDNFYYWT CVVTVAYIYN LLFVIARQVF
NDLIGPSSQS LCRFYNGTLN STTQVECTYN MLTNMKEMPT YSQYPDLGWS
KYWHFRMLWV FFDLLMDCVY LIDTFLNYRM GYMDQGLVVR EAEKVTKAYW
QSKQYRIDGI SLIPLDYILG WPIPYINWRG LPILRLNRLI RYKRVRNCLE
RTETRSSMPN AFRVVVVVWY IVIIIHWNAC LYFWISEWIG LGTDAWVYGH
LNKQSLPDDI TDTLLRRYVY SFYWSTLILT TIGEVPSPVR NIEYAFVTLD
LMCGVLIFAT IVGNVGSMIS NMSAARTEFQ NKMDGIKQYM ELRKVSKQLE
IRVIKWFDYL WTNKQSLSDQ QVLKVLPDKL QAEIAMQVHF ETLRKVRIFQ
DCEAGLLAEL VLKLQLQVFS PGDFICKKGD IGREMYIVKR GRLQVVDDDG
KKVFVTLQEG SVFGELSILN IAGSKNGNRR TANVRSVGYT DLFVLSKTDL
WNALREYPDA RKLLLAKGRE ILKKDNLLDE NAPEEQKTVE EIAEHLNNAV
KVLQTRMARL IVEHSSTEGK LMKRIEMLEK HLSRYKALAR RQKTMHGVSI
DGGDISTDGV DERVRPPRLR QTKTIDLPTG TESESLLK
</SEQ>
<REGION seq_beg="111" pdb_beg="106" seq_end="128" pdb_end="123" type="2"/>
<REGION seq_beg="129" pdb_beg="124" seq_end="151" pdb_end="146" type="H"/>
<REGION seq_beg="152" pdb_beg="147" seq_end="166" pdb_end="161" type="1"/>
<REGION seq_beg="172" pdb_beg="167" seq_end="203" pdb_end="198" type="1"/>
<REGION seq_beg="204" pdb_beg="199" seq_end="225" pdb_end="220" type="H"/>
<REGION seq_beg="226" pdb_beg="221" seq_end="256" pdb_end="251" type="2"/>
<REGION seq_beg="257" pdb_beg="252" seq_end="274" pdb_end="269" type="H"/>
<REGION seq_beg="275" pdb_beg="270" seq_end="278" pdb_end="273" type="1"/>
<REGION seq_beg="279" pdb_beg="274" seq_end="296" pdb_end="291" type="H"/>
<REGION seq_beg="297" pdb_beg="292" seq_end="303" pdb_end="298" type="F"/>
<REGION seq_beg="304" pdb_beg="299" seq_end="310" pdb_end="305" type="2"/>
<REGION seq_beg="311" pdb_beg="306" seq_end="335" pdb_end="330" type="H"/>
<REGION seq_beg="336" pdb_beg="331" seq_end="368" pdb_end="363" type="1"/>
<REGION seq_beg="369" pdb_beg="364" seq_end="385" pdb_end="380" type="L"/>
<REGION seq_beg="386" pdb_beg="381" seq_end="392" pdb_end="387" type="1"/>
<REGION seq_beg="393" pdb_beg="388" seq_end="420" pdb_end="415" type="H"/>
<REGION seq_beg="421" pdb_beg="416" seq_end="423" pdb_end="418" type="2"/>
<REGION seq_beg="424" pdb_beg="419" seq_end="442" pdb_end="437" type="F"/>
<REGION seq_beg="443" pdb_beg="438" seq_end="625" pdb_end="620" type="2"/>
</CHAIN>
</pdbtm>
Overview
5h3o
PDB code:5h3o
Chain(s):A[6], B[6], C[6], D[6]
PDBTM type:Tm_Alpha
Title:STRUCTURE OF A EUKARYOTIC CYCLIC NUCLEOTIDE-GATED CHANNEL
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