PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2017-06-16
Number of transmembrane proteins: 3227 (alpha: 2848 , beta: 366 )
Content of 5f5d
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="5f5d" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2016-03-03</CREATE_DATE>
<MODIFICATION>
<DATE>2016-03-03</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>74.60</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
<PDBKWORD>Membrane</PDBKWORD>
</RAWRES>
<MEMBRANE>
<NORMAL X="0.00000000" Y="0.00000000" Z="15.50000000"/>
<TMATRIX>
<ROWX X="0.98990327" Y="0.13545960" Z="-0.04174025" T="6.48667526"/>
<ROWY X="0.00000000" Y="0.29447490" Z="0.95565921" T="7.64812660"/>
<ROWZ X="0.14174467" Y="-0.94601017" Z="0.29150167" T="-22.71961403"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MGSSHHHHHH SSGLVPRGSH MAALRERAGP VTWVMMIACV VVFIAMQILG
DQEVMLWLAW PFDPTLKFEF WRYFTHALMH FSLMHILFNL LWWWYLGGAV
EKRLGSGKLI VITLISALLS GYVQQKFSGP WFGGLSGVVF ALMGYVWLRG
ERDPQSGIYL QRGLIIFALI WIVAGWFDLF GMSMANGAHI AGLAVGLAMA
FVDSLNARKR K
</SEQ>
<REGION seq_beg="26" pdb_beg="91" seq_end="28" pdb_end="93" type="2"/>
<REGION seq_beg="29" pdb_beg="94" seq_end="48" pdb_end="113" type="H"/>
<REGION seq_beg="49" pdb_beg="114" seq_end="50" pdb_end="115" type="1"/>
<REGION seq_beg="51" pdb_beg="116" seq_end="58" pdb_end="123" type="F"/>
<REGION seq_beg="59" pdb_beg="124" seq_end="71" pdb_end="136" type="1"/>
<REGION seq_beg="72" pdb_beg="137" seq_end="78" pdb_end="143" type="F"/>
<REGION seq_beg="79" pdb_beg="144" seq_end="101" pdb_end="166" type="H"/>
<REGION seq_beg="102" pdb_beg="167" seq_end="105" pdb_end="170" type="2"/>
<REGION seq_beg="106" pdb_beg="171" seq_end="125" pdb_end="190" type="H"/>
<REGION seq_beg="126" pdb_beg="191" seq_end="132" pdb_end="197" type="1"/>
<REGION seq_beg="133" pdb_beg="198" seq_end="151" pdb_end="216" type="H"/>
<REGION seq_beg="152" pdb_beg="217" seq_end="159" pdb_end="224" type="2"/>
<REGION seq_beg="160" pdb_beg="225" seq_end="179" pdb_end="244" type="H"/>
<REGION seq_beg="188" pdb_beg="253" seq_end="188" pdb_end="253" type="1"/>
<REGION seq_beg="189" pdb_beg="254" seq_end="205" pdb_end="270" type="H"/>
<REGION seq_beg="206" pdb_beg="271" seq_end="207" pdb_end="272" type="2"/>
</CHAIN>
</pdbtm>
Overview
5f5d
PDB code:5f5d
Chain(s):A[6]
PDBTM type:Tm_Alpha
Title:CRYSTAL STRUCTURES AND INHIBITION KINETICS REVEAL A TWO-STATE CATALYTIC MECHANISM WITH DRUG DESIGN IMPLICATIONS FOR RHOMBOID PROTEOLYSIS
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