PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2021-09-17
Number of transmembrane proteins: 6368 (alpha: 5849 , beta: 474 )
Content of 5bkg
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="5bkg" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2021-09-09</CREATE_DATE>
<RAWRES>
<TMRES>79.11</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
<PDBKWORD>Membrane</PDBKWORD>
</RAWRES>
<MEMBRANE>
<NORMAL X="0.00000029" Y="0.00000051" Z="17.25000000"/>
<TMATRIX>
<ROWX X="0.99937397" Y="-0.00356360" Z="-0.03519812" T="-100.78332520"/>
<ROWY X="0.00000000" Y="0.99491388" Z="-0.10072905" T="-95.99678802"/>
<ROWZ X="0.03537805" Y="0.10066599" Z="0.99429107" T="-98.48581696"/>
</TMATRIX>
</MEMBRANE>
<CHAIN CHAINID="A" NUM_TM="4" TYPE="alpha">
<SEQ>
KDHDSRSGKQ PSQTLSPSDF LDKLMGRTSG YDARIRPNFK GPPVNVTCNI
FINSFGSVTE TTMDYRVNIF LRQQWNDSRL AYSEYPDDSL DLDPSMLDSI
WKPDLFFANE KGANFHDVTT DNKLLRISKN GKVLYSIRLT LTLSCPMDLK
NFPMDVQTCT MQLESFGYTM NDLIFEWLSD GPVQVAEGLT LPQFILKEEK
ELGYCTKHYN TGKFTCIEVK FHLERQMGYY LIQMYIPSLL IVILSWVSFW
INMDAAPARV ALGITTVLTM TTQSSGSRAS LPKVSYVKAI DIWMAVCLLF
VFAALLEYAA VNFVSRGSSG KKFVDRAKRI DTISRAAFPL AFLIFNIFYW
ITYKIIRHED VHKK
</SEQ>
<REGION seq_beg="15" pdb_beg="15" seq_end="231" pdb_end="231" type="2"/>
<REGION seq_beg="232" pdb_beg="232" seq_end="253" pdb_end="253" type="H"/>
<REGION seq_beg="254" pdb_beg="254" seq_end="255" pdb_end="255" type="1"/>
<REGION seq_beg="256" pdb_beg="256" seq_end="277" pdb_end="277" type="H"/>
<REGION seq_beg="278" pdb_beg="278" seq_end="289" pdb_end="289" type="2"/>
<REGION seq_beg="290" pdb_beg="290" seq_end="313" pdb_end="313" type="H"/>
<REGION seq_beg="314" pdb_beg="314" seq_end="316" pdb_end="316" type="1"/>
<REGION seq_beg="322" pdb_beg="383" seq_end="330" pdb_end="391" type="1"/>
<REGION seq_beg="331" pdb_beg="392" seq_end="353" pdb_end="414" type="H"/>
<REGION seq_beg="354" pdb_beg="415" seq_end="357" pdb_end="418" type="2"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="4" TYPE="alpha">
<SEQ>
KDHDSRSGKQ PSQTLSPSDF LDKLMGRTSG YDARIRPNFK GPPVNVTCNI
FINSFGSVTE TTMDYRVNIF LRQQWNDSRL AYSEYPDDSL DLDPSMLDSI
WKPDLFFANE KGANFHDVTT DNKLLRISKN GKVLYSIRLT LTLSCPMDLK
NFPMDVQTCT MQLESFGYTM NDLIFEWLSD GPVQVAEGLT LPQFILKEEK
ELGYCTKHYN TGKFTCIEVK FHLERQMGYY LIQMYIPSLL IVILSWVSFW
INMDAAPARV ALGITTVLTM TTQSSGSRAS LPKVSYVKAI DIWMAVCLLF
VFAALLEYAA VNFVSRGSSG KKFVDRAKRI DTISRAAFPL AFLIFNIFYW
ITYKIIRHED VHKK
</SEQ>
<REGION seq_beg="15" pdb_beg="15" seq_end="230" pdb_end="230" type="2"/>
<REGION seq_beg="231" pdb_beg="231" seq_end="251" pdb_end="251" type="H"/>
<REGION seq_beg="252" pdb_beg="252" seq_end="255" pdb_end="255" type="1"/>
<REGION seq_beg="256" pdb_beg="256" seq_end="278" pdb_end="278" type="H"/>
<REGION seq_beg="279" pdb_beg="279" seq_end="289" pdb_end="289" type="2"/>
<REGION seq_beg="290" pdb_beg="290" seq_end="311" pdb_end="311" type="H"/>
<REGION seq_beg="312" pdb_beg="312" seq_end="316" pdb_end="316" type="1"/>
<REGION seq_beg="322" pdb_beg="383" seq_end="330" pdb_end="391" type="1"/>
<REGION seq_beg="331" pdb_beg="392" seq_end="353" pdb_end="414" type="H"/>
<REGION seq_beg="354" pdb_beg="415" seq_end="357" pdb_end="418" type="2"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="4" TYPE="alpha">
<SEQ>
KDHDSRSGKQ PSQTLSPSDF LDKLMGRTSG YDARIRPNFK GPPVNVTCNI
FINSFGSVTE TTMDYRVNIF LRQQWNDSRL AYSEYPDDSL DLDPSMLDSI
WKPDLFFANE KGANFHDVTT DNKLLRISKN GKVLYSIRLT LTLSCPMDLK
NFPMDVQTCT MQLESFGYTM NDLIFEWLSD GPVQVAEGLT LPQFILKEEK
ELGYCTKHYN TGKFTCIEVK FHLERQMGYY LIQMYIPSLL IVILSWVSFW
INMDAAPARV ALGITTVLTM TTQSSGSRAS LPKVSYVKAI DIWMAVCLLF
VFAALLEYAA VNFVSRGSSG KKFVDRAKRI DTISRAAFPL AFLIFNIFYW
ITYKIIRHED VHKK
</SEQ>
<REGION seq_beg="15" pdb_beg="15" seq_end="231" pdb_end="231" type="2"/>
<REGION seq_beg="232" pdb_beg="232" seq_end="251" pdb_end="251" type="H"/>
<REGION seq_beg="252" pdb_beg="252" seq_end="255" pdb_end="255" type="1"/>
<REGION seq_beg="256" pdb_beg="256" seq_end="278" pdb_end="278" type="H"/>
<REGION seq_beg="279" pdb_beg="279" seq_end="289" pdb_end="289" type="2"/>
<REGION seq_beg="290" pdb_beg="290" seq_end="312" pdb_end="312" type="H"/>
<REGION seq_beg="313" pdb_beg="313" seq_end="316" pdb_end="316" type="1"/>
<REGION seq_beg="322" pdb_beg="383" seq_end="330" pdb_end="391" type="1"/>
<REGION seq_beg="331" pdb_beg="392" seq_end="355" pdb_end="416" type="H"/>
<REGION seq_beg="356" pdb_beg="417" seq_end="357" pdb_end="418" type="2"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="4" TYPE="alpha">
<SEQ>
KDHDSRSGKQ PSQTLSPSDF LDKLMGRTSG YDARIRPNFK GPPVNVTCNI
FINSFGSVTE TTMDYRVNIF LRQQWNDSRL AYSEYPDDSL DLDPSMLDSI
WKPDLFFANE KGANFHDVTT DNKLLRISKN GKVLYSIRLT LTLSCPMDLK
NFPMDVQTCT MQLESFGYTM NDLIFEWLSD GPVQVAEGLT LPQFILKEEK
ELGYCTKHYN TGKFTCIEVK FHLERQMGYY LIQMYIPSLL IVILSWVSFW
INMDAAPARV ALGITTVLTM TTQSSGSRAS LPKVSYVKAI DIWMAVCLLF
VFAALLEYAA VNFVSRGSSG KKFVDRAKRI DTISRAAFPL AFLIFNIFYW
ITYKIIRHED VHKK
</SEQ>
<REGION seq_beg="15" pdb_beg="15" seq_end="230" pdb_end="230" type="2"/>
<REGION seq_beg="231" pdb_beg="231" seq_end="251" pdb_end="251" type="H"/>
<REGION seq_beg="252" pdb_beg="252" seq_end="256" pdb_end="256" type="1"/>
<REGION seq_beg="257" pdb_beg="257" seq_end="278" pdb_end="278" type="H"/>
<REGION seq_beg="279" pdb_beg="279" seq_end="289" pdb_end="289" type="2"/>
<REGION seq_beg="290" pdb_beg="290" seq_end="313" pdb_end="313" type="H"/>
<REGION seq_beg="314" pdb_beg="314" seq_end="316" pdb_end="316" type="1"/>
<REGION seq_beg="322" pdb_beg="383" seq_end="330" pdb_end="391" type="1"/>
<REGION seq_beg="331" pdb_beg="392" seq_end="352" pdb_end="413" type="H"/>
<REGION seq_beg="353" pdb_beg="414" seq_end="357" pdb_end="418" type="2"/>
</CHAIN>
<CHAIN CHAINID="E" NUM_TM="4" TYPE="alpha">
<SEQ>
GVAMPGAEDD VVAALEVLFQ GPKSSKKGKG KKKQYLCPSQ QSAEDLARVP
ANSTSNILNR LLVSYDPRIR PNFKGIPVDV VVNIFINSFG SIQETTMDYR
VNIFLRQKWN DPRLKLPSDF RGSDALTVDP TMYKCLWKPD LFFANEKSAN
FHDVTQENIL LFIFRDGDVL VSMRLSITLS CPLDLTLFPM DTQRCKMQLE
SFGYTTDDLR FIWQSGDPVQ LEKIALPQFD IKKEDIEYGN CTKYYKGTGY
YTCVEVIFTL RRQVGFYMMG VYAPTLLIVV LSWLSFWINP DASAARVPLG
IFSVLSLASE CTTLAAELPK VSYVKALDVW LIACLLFGFA SLVEYAVVQV
MLNGGSSAAA VSKGEELFTG VVPILVELDG DVNGHKFSVS GEGEGDATYG
KLTLKFICTT GKLPVPWPTL VTTLTYGVQC FSRYPDHMKQ HDFFKSAMPE
GYVQERTIFF KDDGNYKTRA EVKFEGDTLV NRIELKGIDF KEDGNILGHK
LEYNYNSHNV YIMADKQKNG IKVNFKIRHN IEDGSVQLAD HYQQNTPIGD
GPVLLPDNHY LSTQSKLSKD PNEKRDHMVL LEFVTAAGIT LGMDELYKSG
SGSGVGETRC KKVCTSKSDL RSNDFSIVGS LPRDFELSNY DCYGKPIEVN
NGLGKSQAKN NKKPPPAKPV IPTAAKRIDL YARALFPFCF LFFNVIYWSI
YL
</SEQ>
<REGION seq_beg="49" pdb_beg="29" seq_end="268" pdb_end="248" type="2"/>
<REGION seq_beg="269" pdb_beg="249" seq_end="288" pdb_end="268" type="H"/>
<REGION seq_beg="289" pdb_beg="269" seq_end="293" pdb_end="273" type="1"/>
<REGION seq_beg="294" pdb_beg="274" seq_end="313" pdb_end="293" type="H"/>
<REGION seq_beg="314" pdb_beg="294" seq_end="326" pdb_end="306" type="2"/>
<REGION seq_beg="327" pdb_beg="307" seq_end="350" pdb_end="330" type="H"/>
<REGION seq_beg="351" pdb_beg="331" seq_end="352" pdb_end="332" type="1"/>
<REGION seq_beg="353" pdb_beg="333" seq_end="353" pdb_end="333" type="U"/>
<REGION seq_beg="674" pdb_beg="447" seq_end="678" pdb_end="451" type="1"/>
<REGION seq_beg="679" pdb_beg="452" seq_end="700" pdb_end="473" type="H"/>
<REGION seq_beg="701" pdb_beg="474" seq_end="702" pdb_end="475" type="2"/>
</CHAIN>
</pdbtm>
Overview
5bkg
PDB code:5bkg
Chain(s):A[4], B[4], C[4], D[4], E[4]
PDBTM type:Tm_Alpha
Title:CYRO-EM STRUCTURE OF HUMAN GLYCINE RECEPTOR ALPHA2-BETA HETEROMER, GLYCINE BOUND, (SEMI)OPEN STATE
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