PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2017-06-16
Number of transmembrane proteins: 3227 (alpha: 2848 , beta: 366 )
Content of 4bgn
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="4bgn" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2013-08-05</CREATE_DATE>
<MODIFICATION>
<DATE>2013-08-05</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2013-08-08</DATE>
<DESCR>Sidedefinition added</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>65.69</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<BIOMATRIX>
<MATRIX ID="1">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="C"/>
<TMATRIX>
<ROWX X="0.00000000" Y="-1.00000000" Z="0.00000000" T="115.00000000"/>
<ROWY X="1.00000000" Y="0.00000000" Z="0.00000000" T="115.00000000"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="2">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="D"/>
<TMATRIX>
<ROWX X="-1.00000000" Y="0.00000000" Z="0.00000000" T="0.00000000"/>
<ROWY X="0.00000000" Y="-1.00000000" Z="0.00000000" T="230.00000000"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="3">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="E"/>
<TMATRIX>
<ROWX X="0.00000000" Y="1.00000000" Z="0.00000000" T="-115.00000000"/>
<ROWY X="-1.00000000" Y="0.00000000" Z="0.00000000" T="115.00000000"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<DELETE CHAINID="B"/>
</BIOMATRIX>
<MEMBRANE>
<NORMAL X="-0.00000003" Y="0.00000001" Z="12.50000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-0.00000446"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-114.99979401"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-5.12199974"/>
</TMATRIX>
</MEMBRANE>
<SIDEDEFINITION Side1="Inside">
<NOTE>According to 23831224/Fig1</NOTE>
</SIDEDEFINITION>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MSHIHERHSQ LKHPIEAWCD WLVNHPRFTS AIIVLIVINA IVVGMETYPG
IYQPYQDWFY LIDRMILWVF TAEIILKLVA TRPRYHFFKD SWNVFDFLIV
ASGHLFVGAQ FVTVLRVLRV LRLLRAVTVI PSLRRLVSAL LYTIPSLGNI
MLLMGLIFYI FGVMGTFLFR DVAPEYFGSL HLSLITLFQV VTLESWASGI
MRPIMAEVFW SWIYFVAFIL VGTFVIFNLF VGVIVSNVER AETEDAEQEE
GQREERQGLF EGDGSSVSAE EIAKLRQEIK ELRQLLKELK DHHSQSST
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="26" pdb_end="26" type="U"/>
<REGION seq_beg="27" pdb_beg="27" seq_end="31" pdb_end="31" type="1"/>
<REGION seq_beg="32" pdb_beg="32" seq_end="47" pdb_end="47" type="H"/>
<REGION seq_beg="48" pdb_beg="48" seq_end="48" pdb_end="48" type="2"/>
<REGION seq_beg="49" pdb_beg="49" seq_end="55" pdb_end="55" type="F"/>
<REGION seq_beg="56" pdb_beg="56" seq_end="57" pdb_end="57" type="2"/>
<REGION seq_beg="58" pdb_beg="58" seq_end="75" pdb_end="75" type="H"/>
<REGION seq_beg="76" pdb_beg="76" seq_end="94" pdb_end="94" type="1"/>
<REGION seq_beg="95" pdb_beg="95" seq_end="112" pdb_end="112" type="H"/>
<REGION seq_beg="113" pdb_beg="113" seq_end="113" pdb_end="113" type="2"/>
<REGION seq_beg="114" pdb_beg="114" seq_end="129" pdb_end="129" type="H"/>
<REGION seq_beg="130" pdb_beg="130" seq_end="130" pdb_end="130" type="1"/>
<REGION seq_beg="131" pdb_beg="131" seq_end="136" pdb_end="136" type="F"/>
<REGION seq_beg="137" pdb_beg="137" seq_end="137" pdb_end="137" type="1"/>
<REGION seq_beg="138" pdb_beg="138" seq_end="145" pdb_end="145" type="U"/>
<REGION seq_beg="146" pdb_beg="146" seq_end="147" pdb_end="147" type="1"/>
<REGION seq_beg="148" pdb_beg="148" seq_end="165" pdb_end="165" type="H"/>
<REGION seq_beg="166" pdb_beg="166" seq_end="183" pdb_end="183" type="2"/>
<REGION seq_beg="184" pdb_beg="184" seq_end="197" pdb_end="197" type="L"/>
<REGION seq_beg="198" pdb_beg="198" seq_end="212" pdb_end="212" type="2"/>
<REGION seq_beg="213" pdb_beg="213" seq_end="230" pdb_end="230" type="H"/>
<REGION seq_beg="231" pdb_beg="231" seq_end="247" pdb_end="247" type="1"/>
<REGION seq_beg="248" pdb_beg="248" seq_end="298" pdb_end="298" type="U"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
MSHIHERHSQ LKHPIEAWCD WLVNHPRFTS AIIVLIVINA IVVGMETYPG
IYQPYQDWFY LIDRMILWVF TAEIILKLVA TRPRYHFFKD SWNVFDFLIV
ASGHLFVGAQ FVTVLRVLRV LRLLRAVTVI PSLRRLVSAL LYTIPSLGNI
MLLMGLIFYI FGVMGTFLFR DVAPEYFGSL HLSLITLFQV VTLESWASGI
MRPIMAEVFW SWIYFVAFIL VGTFVIFNLF VGVIVSNVER AETEDAEQEE
GQREERQGLF EGDGSSVSAE EIAKLRQEIK ELRQLLKELK DHHSQSST
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="26" pdb_end="26" type="U"/>
<REGION seq_beg="27" pdb_beg="27" seq_end="31" pdb_end="31" type="1"/>
<REGION seq_beg="32" pdb_beg="32" seq_end="47" pdb_end="47" type="H"/>
<REGION seq_beg="48" pdb_beg="48" seq_end="48" pdb_end="48" type="2"/>
<REGION seq_beg="49" pdb_beg="49" seq_end="55" pdb_end="55" type="F"/>
<REGION seq_beg="56" pdb_beg="56" seq_end="57" pdb_end="57" type="2"/>
<REGION seq_beg="58" pdb_beg="58" seq_end="75" pdb_end="75" type="H"/>
<REGION seq_beg="76" pdb_beg="76" seq_end="94" pdb_end="94" type="1"/>
<REGION seq_beg="95" pdb_beg="95" seq_end="112" pdb_end="112" type="H"/>
<REGION seq_beg="113" pdb_beg="113" seq_end="113" pdb_end="113" type="2"/>
<REGION seq_beg="114" pdb_beg="114" seq_end="129" pdb_end="129" type="H"/>
<REGION seq_beg="130" pdb_beg="130" seq_end="130" pdb_end="130" type="1"/>
<REGION seq_beg="131" pdb_beg="131" seq_end="136" pdb_end="136" type="F"/>
<REGION seq_beg="137" pdb_beg="137" seq_end="137" pdb_end="137" type="1"/>
<REGION seq_beg="138" pdb_beg="138" seq_end="145" pdb_end="145" type="U"/>
<REGION seq_beg="146" pdb_beg="146" seq_end="147" pdb_end="147" type="1"/>
<REGION seq_beg="148" pdb_beg="148" seq_end="165" pdb_end="165" type="H"/>
<REGION seq_beg="166" pdb_beg="166" seq_end="183" pdb_end="183" type="2"/>
<REGION seq_beg="184" pdb_beg="184" seq_end="197" pdb_end="197" type="L"/>
<REGION seq_beg="198" pdb_beg="198" seq_end="212" pdb_end="212" type="2"/>
<REGION seq_beg="213" pdb_beg="213" seq_end="230" pdb_end="230" type="H"/>
<REGION seq_beg="231" pdb_beg="231" seq_end="247" pdb_end="247" type="1"/>
<REGION seq_beg="248" pdb_beg="248" seq_end="298" pdb_end="298" type="U"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
MSHIHERHSQ LKHPIEAWCD WLVNHPRFTS AIIVLIVINA IVVGMETYPG
IYQPYQDWFY LIDRMILWVF TAEIILKLVA TRPRYHFFKD SWNVFDFLIV
ASGHLFVGAQ FVTVLRVLRV LRLLRAVTVI PSLRRLVSAL LYTIPSLGNI
MLLMGLIFYI FGVMGTFLFR DVAPEYFGSL HLSLITLFQV VTLESWASGI
MRPIMAEVFW SWIYFVAFIL VGTFVIFNLF VGVIVSNVER AETEDAEQEE
GQREERQGLF EGDGSSVSAE EIAKLRQEIK ELRQLLKELK DHHSQSST
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="26" pdb_end="26" type="U"/>
<REGION seq_beg="27" pdb_beg="27" seq_end="31" pdb_end="31" type="1"/>
<REGION seq_beg="32" pdb_beg="32" seq_end="47" pdb_end="47" type="H"/>
<REGION seq_beg="48" pdb_beg="48" seq_end="48" pdb_end="48" type="2"/>
<REGION seq_beg="49" pdb_beg="49" seq_end="55" pdb_end="55" type="F"/>
<REGION seq_beg="56" pdb_beg="56" seq_end="57" pdb_end="57" type="2"/>
<REGION seq_beg="58" pdb_beg="58" seq_end="75" pdb_end="75" type="H"/>
<REGION seq_beg="76" pdb_beg="76" seq_end="94" pdb_end="94" type="1"/>
<REGION seq_beg="95" pdb_beg="95" seq_end="112" pdb_end="112" type="H"/>
<REGION seq_beg="113" pdb_beg="113" seq_end="113" pdb_end="113" type="2"/>
<REGION seq_beg="114" pdb_beg="114" seq_end="129" pdb_end="129" type="H"/>
<REGION seq_beg="130" pdb_beg="130" seq_end="130" pdb_end="130" type="1"/>
<REGION seq_beg="131" pdb_beg="131" seq_end="136" pdb_end="136" type="F"/>
<REGION seq_beg="137" pdb_beg="137" seq_end="137" pdb_end="137" type="1"/>
<REGION seq_beg="138" pdb_beg="138" seq_end="145" pdb_end="145" type="U"/>
<REGION seq_beg="146" pdb_beg="146" seq_end="147" pdb_end="147" type="1"/>
<REGION seq_beg="148" pdb_beg="148" seq_end="165" pdb_end="165" type="H"/>
<REGION seq_beg="166" pdb_beg="166" seq_end="183" pdb_end="183" type="2"/>
<REGION seq_beg="184" pdb_beg="184" seq_end="197" pdb_end="197" type="L"/>
<REGION seq_beg="198" pdb_beg="198" seq_end="212" pdb_end="212" type="2"/>
<REGION seq_beg="213" pdb_beg="213" seq_end="230" pdb_end="230" type="H"/>
<REGION seq_beg="231" pdb_beg="231" seq_end="247" pdb_end="247" type="1"/>
<REGION seq_beg="248" pdb_beg="248" seq_end="298" pdb_end="298" type="U"/>
</CHAIN>
<CHAIN CHAINID="E" NUM_TM="6" TYPE="alpha">
<SEQ>
MSHIHERHSQ LKHPIEAWCD WLVNHPRFTS AIIVLIVINA IVVGMETYPG
IYQPYQDWFY LIDRMILWVF TAEIILKLVA TRPRYHFFKD SWNVFDFLIV
ASGHLFVGAQ FVTVLRVLRV LRLLRAVTVI PSLRRLVSAL LYTIPSLGNI
MLLMGLIFYI FGVMGTFLFR DVAPEYFGSL HLSLITLFQV VTLESWASGI
MRPIMAEVFW SWIYFVAFIL VGTFVIFNLF VGVIVSNVER AETEDAEQEE
GQREERQGLF EGDGSSVSAE EIAKLRQEIK ELRQLLKELK DHHSQSST
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="26" pdb_end="26" type="U"/>
<REGION seq_beg="27" pdb_beg="27" seq_end="31" pdb_end="31" type="1"/>
<REGION seq_beg="32" pdb_beg="32" seq_end="47" pdb_end="47" type="H"/>
<REGION seq_beg="48" pdb_beg="48" seq_end="48" pdb_end="48" type="2"/>
<REGION seq_beg="49" pdb_beg="49" seq_end="55" pdb_end="55" type="F"/>
<REGION seq_beg="56" pdb_beg="56" seq_end="57" pdb_end="57" type="2"/>
<REGION seq_beg="58" pdb_beg="58" seq_end="75" pdb_end="75" type="H"/>
<REGION seq_beg="76" pdb_beg="76" seq_end="94" pdb_end="94" type="1"/>
<REGION seq_beg="95" pdb_beg="95" seq_end="112" pdb_end="112" type="H"/>
<REGION seq_beg="113" pdb_beg="113" seq_end="113" pdb_end="113" type="2"/>
<REGION seq_beg="114" pdb_beg="114" seq_end="129" pdb_end="129" type="H"/>
<REGION seq_beg="130" pdb_beg="130" seq_end="130" pdb_end="130" type="1"/>
<REGION seq_beg="131" pdb_beg="131" seq_end="136" pdb_end="136" type="F"/>
<REGION seq_beg="137" pdb_beg="137" seq_end="137" pdb_end="137" type="1"/>
<REGION seq_beg="138" pdb_beg="138" seq_end="145" pdb_end="145" type="U"/>
<REGION seq_beg="146" pdb_beg="146" seq_end="147" pdb_end="147" type="1"/>
<REGION seq_beg="148" pdb_beg="148" seq_end="165" pdb_end="165" type="H"/>
<REGION seq_beg="166" pdb_beg="166" seq_end="183" pdb_end="183" type="2"/>
<REGION seq_beg="184" pdb_beg="184" seq_end="197" pdb_end="197" type="L"/>
<REGION seq_beg="198" pdb_beg="198" seq_end="212" pdb_end="212" type="2"/>
<REGION seq_beg="213" pdb_beg="213" seq_end="230" pdb_end="230" type="H"/>
<REGION seq_beg="231" pdb_beg="231" seq_end="247" pdb_end="247" type="1"/>
<REGION seq_beg="248" pdb_beg="248" seq_end="298" pdb_end="298" type="U"/>
</CHAIN>
</pdbtm>
Overview
4bgn
PDB code:4bgn
Chain(s):A[6], C[6], D[6], E[6]
PDBTM type:Tm_Alpha
Title:CRYO-EM STRUCTURE OF THE NAVCT VOLTAGE-GATED SODIUM CHANNEL
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