PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2021-10-15
Number of transmembrane proteins: 6432 (alpha: 5910 , beta: 473 )
Content of 3rko
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm.enzim.hu/data/pdbtm.xsd pdbtm.xsd" ID="3rko" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2011-08-04</CREATE_DATE>
<MODIFICATION>
<DATE>2012-06-22</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2013-05-10</DATE>
<DESCR>Sidedefinition added</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>68.63</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
</RAWRES>
<BIOMATRIX>
<DELETE CHAINID="B"/>
<DELETE CHAINID="C"/>
<DELETE CHAINID="D"/>
<DELETE CHAINID="G"/>
<DELETE CHAINID="E"/>
<DELETE CHAINID="F"/>
</BIOMATRIX>
<MEMBRANE>
<NORMAL X="0.00000000" Y="0.00000000" Z="11.00000000"/>
<TMATRIX>
<ROWX X="0.87731385" Y="0.47802520" Z="-0.04256971" T="-6.78901958"/>
<ROWY X="0.02973523" Y="0.03438849" Z="0.99896604" T="-14.73595810"/>
<ROWZ X="0.47899491" Y="-0.87767261" Z="0.01595531" T="26.18352127"/>
</TMATRIX>
</MEMBRANE>
<SIDEDEFINITION Side1="Inside">
<NOTE>by similarity to chain: M (see TOPDB: AP01229)</NOTE>
</SIDEDEFINITION>
<CHAIN CHAINID="L" NUM_TM="16" TYPE="alpha">
<SEQ>
MNMLALTIIL PLIGFVLLAF SRGRWSENVS AIVGVGSVGL AALVTAFIGV
DFFANGEQTY SQPLWTWMSV GDFNIGFNLV LDGLSLTMLS VVTGVGFLIH
MYASWYMRGE EGYSRFFAYT NLFIASMVVL VLADNLLLMY LGWEGVGLCS
YLLIGFYYTD PKNGAAAMKA FVVTRVGDVF LAFALFILYN ELGTLNFREM
VELAPAHFAD GNNMLMWATL MLLGGAVGKS AQLPLQTWLA DAMAGPTPVS
ALIHAATMVT AGVYLIARTH GLFLMTPEVL HLVGIVGAVT LLLAGFAALV
QTDIKRVLAY STMSQIGYMF LALGVQAWDA AIFHLMTHAF FKALLFLASG
SVILACHHEQ NIFKMGGLRK SIPLVYLCFL VGGAALSALP LVTAGFFSKD
EILAGAMANG HINLMVAGLV GAFMTSLYTF RMIFIVFHGK EQIHAHAVKG
VTHSLPLIVL LILSTFVGAL IVPPLQGVLP QTTELAHGSM LTLEITSGVV
AVVGILLAAW LWLGKRTLVT SIANSAPGRL LSTWWYNAWG FDWLYDKVFV
KPFLGIAWLL KRDPLNSMMN IPAVLSRFAG KGLLLSENGY LRWYVASMSI
GAVVVLALLM VLR
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="1" pdb_end="1" type="2"/>
<REGION seq_beg="2" pdb_beg="2" seq_end="16" pdb_end="16" type="H"/>
<REGION seq_beg="17" pdb_beg="17" seq_end="37" pdb_end="37" type="1"/>
<REGION seq_beg="38" pdb_beg="38" seq_end="54" pdb_end="54" type="H"/>
<REGION seq_beg="55" pdb_beg="55" seq_end="79" pdb_end="79" type="2"/>
<REGION seq_beg="80" pdb_beg="80" seq_end="97" pdb_end="97" type="H"/>
<REGION seq_beg="98" pdb_beg="98" seq_end="121" pdb_end="121" type="1"/>
<REGION seq_beg="122" pdb_beg="122" seq_end="133" pdb_end="133" type="H"/>
<REGION seq_beg="134" pdb_beg="134" seq_end="136" pdb_end="136" type="2"/>
<REGION seq_beg="137" pdb_beg="137" seq_end="150" pdb_end="150" type="H"/>
<REGION seq_beg="151" pdb_beg="151" seq_end="170" pdb_end="170" type="1"/>
<REGION seq_beg="171" pdb_beg="171" seq_end="183" pdb_end="183" type="H"/>
<REGION seq_beg="184" pdb_beg="184" seq_end="220" pdb_end="220" type="2"/>
<REGION seq_beg="221" pdb_beg="221" seq_end="239" pdb_end="239" type="H"/>
<REGION seq_beg="240" pdb_beg="240" seq_end="252" pdb_end="252" type="1"/>
<REGION seq_beg="253" pdb_beg="253" seq_end="268" pdb_end="268" type="H"/>
<REGION seq_beg="269" pdb_beg="269" seq_end="281" pdb_end="281" type="2"/>
<REGION seq_beg="282" pdb_beg="282" seq_end="295" pdb_end="295" type="H"/>
<REGION seq_beg="296" pdb_beg="296" seq_end="312" pdb_end="312" type="1"/>
<REGION seq_beg="313" pdb_beg="313" seq_end="325" pdb_end="325" type="H"/>
<REGION seq_beg="326" pdb_beg="326" seq_end="327" pdb_end="327" type="2"/>
<REGION seq_beg="328" pdb_beg="328" seq_end="341" pdb_end="341" type="H"/>
<REGION seq_beg="342" pdb_beg="342" seq_end="385" pdb_end="385" type="1"/>
<REGION seq_beg="386" pdb_beg="386" seq_end="407" pdb_end="407" type="H"/>
<REGION seq_beg="408" pdb_beg="408" seq_end="411" pdb_end="411" type="2"/>
<REGION seq_beg="412" pdb_beg="412" seq_end="425" pdb_end="425" type="H"/>
<REGION seq_beg="426" pdb_beg="426" seq_end="463" pdb_end="463" type="1"/>
<REGION seq_beg="464" pdb_beg="464" seq_end="475" pdb_end="475" type="H"/>
<REGION seq_beg="476" pdb_beg="476" seq_end="487" pdb_end="487" type="2"/>
<REGION seq_beg="488" pdb_beg="488" seq_end="501" pdb_end="501" type="H"/>
<REGION seq_beg="502" pdb_beg="502" seq_end="525" pdb_end="525" type="1"/>
<REGION seq_beg="526" pdb_beg="526" seq_end="537" pdb_end="537" type="F"/>
<REGION seq_beg="538" pdb_beg="538" seq_end="541" pdb_end="541" type="1"/>
<REGION seq_beg="542" pdb_beg="542" seq_end="548" pdb_end="548" type="F"/>
<REGION seq_beg="549" pdb_beg="549" seq_end="549" pdb_end="549" type="1"/>
<REGION seq_beg="550" pdb_beg="550" seq_end="559" pdb_end="559" type="F"/>
<REGION seq_beg="560" pdb_beg="560" seq_end="563" pdb_end="563" type="1"/>
<REGION seq_beg="564" pdb_beg="564" seq_end="584" pdb_end="584" type="F"/>
<REGION seq_beg="585" pdb_beg="585" seq_end="591" pdb_end="591" type="1"/>
<REGION seq_beg="592" pdb_beg="592" seq_end="607" pdb_end="607" type="H"/>
<REGION seq_beg="608" pdb_beg="608" seq_end="612" pdb_end="612" type="2"/>
<REGION seq_beg="613" pdb_beg="613" seq_end="613" pdb_end="613" type="U"/>
</CHAIN>
<CHAIN CHAINID="M" NUM_TM="14" TYPE="alpha">
<SEQ>
MLLPWLILIP FIGGFLCWQT ERFGVKVPRW IALITMGLTL ALSLQLWLQG
GYSLTQSAGI PQWQSEFDMP WIPRFGISIH LAIDGLSLLM VVLTGLLGVL
AVLCSWKEIE KYQGFFHLNL MWILGGVIGV FLAIDMFLFF FFWEMMLVPM
YFLIALWGHK ASDGKTRITA ATKFFIYTQA SGLVMLIAIL ALVFVHYNAT
GVWTFNYEEL LNTPMSSGVE YLLMLGFFIA FAVKMPVVPL HGWLPDAHSQ
APTAGSVDLA GILLKTAAYG LLRFSLPLFP NASAEFAPIA MWLGVIGIFY
GAWMAFAQTD IKRLIAYTSV SHMGFVLIAI YTGSQLAYQG AVIQMIAHGL
SAAGLFILCG QLYERIHTRD MRMMGGLWSK MKWLPALSLF FAVATLGMPG
TGNFVGEFMI LFGSFQVVPV ITVISTFGLV FASVYSLAML HRAYFGKAKS
QIASQELPGM SLRELFMILL LVVLLVLLGF YPQPILDTSH SAIGNIQQWF
VNSVTTTRP
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="4" pdb_end="4" type="2"/>
<REGION seq_beg="5" pdb_beg="5" seq_end="19" pdb_end="19" type="H"/>
<REGION seq_beg="20" pdb_beg="20" seq_end="31" pdb_end="31" type="1"/>
<REGION seq_beg="32" pdb_beg="32" seq_end="45" pdb_end="45" type="H"/>
<REGION seq_beg="46" pdb_beg="46" seq_end="89" pdb_end="89" type="2"/>
<REGION seq_beg="90" pdb_beg="90" seq_end="102" pdb_end="102" type="H"/>
<REGION seq_beg="103" pdb_beg="103" seq_end="117" pdb_end="117" type="1"/>
<REGION seq_beg="118" pdb_beg="118" seq_end="131" pdb_end="131" type="H"/>
<REGION seq_beg="132" pdb_beg="132" seq_end="140" pdb_end="140" type="2"/>
<REGION seq_beg="141" pdb_beg="141" seq_end="153" pdb_end="153" type="H"/>
<REGION seq_beg="154" pdb_beg="154" seq_end="171" pdb_end="171" type="1"/>
<REGION seq_beg="172" pdb_beg="172" seq_end="184" pdb_end="184" type="H"/>
<REGION seq_beg="185" pdb_beg="185" seq_end="229" pdb_end="229" type="2"/>
<REGION seq_beg="230" pdb_beg="230" seq_end="248" pdb_end="248" type="H"/>
<REGION seq_beg="249" pdb_beg="249" seq_end="254" pdb_end="254" type="1"/>
<REGION seq_beg="255" pdb_beg="255" seq_end="269" pdb_end="269" type="H"/>
<REGION seq_beg="270" pdb_beg="270" seq_end="292" pdb_end="292" type="2"/>
<REGION seq_beg="293" pdb_beg="293" seq_end="306" pdb_end="306" type="H"/>
<REGION seq_beg="307" pdb_beg="307" seq_end="314" pdb_end="314" type="1"/>
<REGION seq_beg="315" pdb_beg="315" seq_end="328" pdb_end="328" type="H"/>
<REGION seq_beg="329" pdb_beg="329" seq_end="341" pdb_end="341" type="2"/>
<REGION seq_beg="342" pdb_beg="342" seq_end="356" pdb_end="356" type="H"/>
<REGION seq_beg="357" pdb_beg="357" seq_end="390" pdb_end="390" type="1"/>
<REGION seq_beg="391" pdb_beg="391" seq_end="408" pdb_end="408" type="H"/>
<REGION seq_beg="409" pdb_beg="409" seq_end="422" pdb_end="422" type="2"/>
<REGION seq_beg="423" pdb_beg="423" seq_end="436" pdb_end="436" type="H"/>
<REGION seq_beg="437" pdb_beg="437" seq_end="467" pdb_end="467" type="1"/>
<REGION seq_beg="468" pdb_beg="468" seq_end="482" pdb_end="482" type="H"/>
<REGION seq_beg="483" pdb_beg="483" seq_end="504" pdb_end="504" type="2"/>
<REGION seq_beg="505" pdb_beg="505" seq_end="509" pdb_end="509" type="U"/>
</CHAIN>
<CHAIN CHAINID="N" NUM_TM="14" TYPE="alpha">
<SEQ>
MTITPQNLIA LLPLLIVGLT VVVVMLSIAW RRNHFLNATL SVIGLNAALV
SLWFVGQAGA MDVTPLMRVD GFAMLYTGLV LLASLATCTF AYPWLEGYND
NKDEFYLLVL IAALGGILLA NANHLASLFL GIELISLPLF GLVGYAFRQK
RSLEASIKYT ILSAAASSFL LFGMALVYAQ SGDLSFVALG KNLGDGMLNE
PLLLAGFGLM IVGLGFKLSL VPFHLWTPDV YQGAPAPVST FLATASKIAI
FGVVMRLFLY APVGDSEAIR VVLAIIAFAS IIFGNLMALS QTNIKRLLGY
SSISHLGYLL VALIALQTGE MSMEAVGVYL AGYLFSSLGA FGVVSLMSSP
YRGPDADSLF SYRGLFWHRP ILAAVMTVMM LSLAGIPMTL GFIGKFYVLA
VGVQAHLWWL VGAVVVGSAI GLYYYLRVAV SLYLHAPEQP GRDAPSNWQY
SAGGIVVLIS ALLVLVLGVW PQPLISIVRL AMPLM
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="13" pdb_end="13" type="2"/>
<REGION seq_beg="14" pdb_beg="14" seq_end="28" pdb_end="28" type="H"/>
<REGION seq_beg="29" pdb_beg="29" seq_end="36" pdb_end="36" type="1"/>
<REGION seq_beg="37" pdb_beg="37" seq_end="51" pdb_end="51" type="H"/>
<REGION seq_beg="52" pdb_beg="52" seq_end="76" pdb_end="76" type="2"/>
<REGION seq_beg="77" pdb_beg="77" seq_end="90" pdb_end="90" type="H"/>
<REGION seq_beg="91" pdb_beg="91" seq_end="104" pdb_end="104" type="1"/>
<REGION seq_beg="105" pdb_beg="105" seq_end="119" pdb_end="119" type="H"/>
<REGION seq_beg="120" pdb_beg="120" seq_end="128" pdb_end="128" type="2"/>
<REGION seq_beg="129" pdb_beg="129" seq_end="143" pdb_end="143" type="H"/>
<REGION seq_beg="144" pdb_beg="144" seq_end="158" pdb_end="158" type="1"/>
<REGION seq_beg="159" pdb_beg="159" seq_end="172" pdb_end="172" type="H"/>
<REGION seq_beg="173" pdb_beg="173" seq_end="191" pdb_end="191" type="2"/>
<REGION seq_beg="192" pdb_beg="192" seq_end="198" pdb_end="198" type="U"/>
<REGION seq_beg="199" pdb_beg="199" seq_end="209" pdb_end="209" type="2"/>
<REGION seq_beg="210" pdb_beg="210" seq_end="228" pdb_end="228" type="H"/>
<REGION seq_beg="229" pdb_beg="229" seq_end="237" pdb_end="237" type="1"/>
<REGION seq_beg="238" pdb_beg="238" seq_end="251" pdb_end="251" type="H"/>
<REGION seq_beg="252" pdb_beg="252" seq_end="275" pdb_end="275" type="2"/>
<REGION seq_beg="276" pdb_beg="276" seq_end="289" pdb_end="289" type="H"/>
<REGION seq_beg="290" pdb_beg="290" seq_end="297" pdb_end="297" type="1"/>
<REGION seq_beg="298" pdb_beg="298" seq_end="310" pdb_end="310" type="H"/>
<REGION seq_beg="311" pdb_beg="311" seq_end="329" pdb_end="329" type="2"/>
<REGION seq_beg="330" pdb_beg="330" seq_end="342" pdb_end="342" type="H"/>
<REGION seq_beg="343" pdb_beg="343" seq_end="374" pdb_end="374" type="1"/>
<REGION seq_beg="375" pdb_beg="375" seq_end="389" pdb_end="389" type="H"/>
<REGION seq_beg="390" pdb_beg="390" seq_end="412" pdb_end="412" type="2"/>
<REGION seq_beg="413" pdb_beg="413" seq_end="426" pdb_end="426" type="H"/>
<REGION seq_beg="427" pdb_beg="427" seq_end="439" pdb_end="439" type="1"/>
<REGION seq_beg="440" pdb_beg="440" seq_end="444" pdb_end="444" type="U"/>
<REGION seq_beg="445" pdb_beg="445" seq_end="452" pdb_end="452" type="1"/>
<REGION seq_beg="453" pdb_beg="453" seq_end="470" pdb_end="470" type="H"/>
<REGION seq_beg="471" pdb_beg="471" seq_end="471" pdb_end="471" type="2"/>
<REGION seq_beg="472" pdb_beg="472" seq_end="479" pdb_end="479" type="F"/>
<REGION seq_beg="480" pdb_beg="480" seq_end="485" pdb_end="485" type="2"/>
</CHAIN>
<CHAIN CHAINID="K" NUM_TM="3" TYPE="alpha">
<SEQ>
MIPLQHGLIL AAILFVLGLT GLVIRRNLLF MLIGLEIMIN ASALAFVVAG
SYWGQTDGQV MYILAISLAA AEASIGLALL LQLHRRRQNL NIDSVSEMRG

</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="10" pdb_end="10" type="2"/>
<REGION seq_beg="11" pdb_beg="11" seq_end="24" pdb_end="24" type="H"/>
<REGION seq_beg="25" pdb_beg="25" seq_end="30" pdb_end="30" type="1"/>
<REGION seq_beg="31" pdb_beg="31" seq_end="44" pdb_end="44" type="H"/>
<REGION seq_beg="45" pdb_beg="45" seq_end="62" pdb_end="62" type="2"/>
<REGION seq_beg="63" pdb_beg="63" seq_end="76" pdb_end="76" type="H"/>
<REGION seq_beg="77" pdb_beg="77" seq_end="100" pdb_end="100" type="1"/>
</CHAIN>
<CHAIN CHAINID="A" NUM_TM="3" TYPE="alpha">
<SEQ>
MSMSTSTEVI AHHWAFAIFL IVAIGLCCLM LVGGWFLGGR ARARSKNVPF
ESGIDSVGSA RLRLSAKFYL VAMFFVIFDV EALYLFAWST SIRESGWVGF
VEAAIFIFVL LAGLVYLVRI GALDWTPARS RRERMNPETN SIANRQR
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="14" pdb_end="14" type="U"/>
<REGION seq_beg="15" pdb_beg="15" seq_end="17" pdb_end="17" type="2"/>
<REGION seq_beg="18" pdb_beg="18" seq_end="32" pdb_end="32" type="H"/>
<REGION seq_beg="33" pdb_beg="33" seq_end="43" pdb_end="43" type="1"/>
<REGION seq_beg="44" pdb_beg="44" seq_end="60" pdb_end="60" type="U"/>
<REGION seq_beg="61" pdb_beg="61" seq_end="73" pdb_end="73" type="1"/>
<REGION seq_beg="74" pdb_beg="74" seq_end="86" pdb_end="86" type="H"/>
<REGION seq_beg="87" pdb_beg="87" seq_end="103" pdb_end="103" type="2"/>
<REGION seq_beg="104" pdb_beg="104" seq_end="116" pdb_end="116" type="H"/>
<REGION seq_beg="117" pdb_beg="117" seq_end="126" pdb_end="126" type="1"/>
<REGION seq_beg="127" pdb_beg="127" seq_end="147" pdb_end="147" type="U"/>
</CHAIN>
<CHAIN CHAINID="J" NUM_TM="5" TYPE="alpha">
<SEQ>
MEFAFYICGL IAILATLRVI THTNPVHALL YLIISLLAIS GVFFSLGAYF
AGALEIIVYA GAIMVLFVFV VMMLNLGGSE IEQERQWLKP QVWIGPAILS
AIMLVVIVYA ILGVNDQGID GTPISAKAVG ITLFGPYVLA VELASMLLLA
GLVVAFHVGR EERAGEVLSN RKDDSAKRKT EEHA
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="7" pdb_end="7" type="2"/>
<REGION seq_beg="8" pdb_beg="8" seq_end="21" pdb_end="21" type="H"/>
<REGION seq_beg="22" pdb_beg="22" seq_end="28" pdb_end="28" type="1"/>
<REGION seq_beg="29" pdb_beg="29" seq_end="42" pdb_end="42" type="H"/>
<REGION seq_beg="43" pdb_beg="43" seq_end="51" pdb_end="51" type="2"/>
<REGION seq_beg="52" pdb_beg="52" seq_end="67" pdb_end="67" type="H"/>
<REGION seq_beg="68" pdb_beg="68" seq_end="93" pdb_end="93" type="1"/>
<REGION seq_beg="94" pdb_beg="94" seq_end="106" pdb_end="106" type="H"/>
<REGION seq_beg="107" pdb_beg="107" seq_end="125" pdb_end="125" type="2"/>
<REGION seq_beg="126" pdb_beg="126" seq_end="133" pdb_end="133" type="F"/>
<REGION seq_beg="134" pdb_beg="134" seq_end="141" pdb_end="141" type="2"/>
<REGION seq_beg="142" pdb_beg="142" seq_end="155" pdb_end="155" type="H"/>
<REGION seq_beg="156" pdb_beg="156" seq_end="168" pdb_end="168" type="1"/>
<REGION seq_beg="169" pdb_beg="169" seq_end="184" pdb_end="184" type="U"/>
</CHAIN>
</pdbtm>
Overview
3rko
PDB code:3rko
Chain(s):
PDBTM type:Tm_Alpha
Title:CRYSTAL STRUCTURE OF THE MEMBRANE DOMAIN OF RESPIRATORY COMPLEX I FROM E. COLI AT 3.0 ANGSTROM RESOLUTION
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