PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2017-06-16
Number of transmembrane proteins: 3227 (alpha: 2848 , beta: 366 )
Content of 3lnm
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="3lnm" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2010-04-16</CREATE_DATE>
<MODIFICATION>
<DATE>2012-06-18</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2013-05-10</DATE>
<DESCR>Sidedefinition added</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>73.27</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
</RAWRES>
<BIOMATRIX>
<MATRIX ID="1">
<APPLY_TO_CHAIN CHAINID="B" NEW_CHAINID="E"/>
<TMATRIX>
<ROWX X="-1.00000000" Y="0.00000000" Z="0.00000000" T="0.00000000"/>
<ROWY X="0.00000000" Y="-1.00000000" Z="0.00000000" T="144.27099609"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="2">
<APPLY_TO_CHAIN CHAINID="B" NEW_CHAINID="F"/>
<TMATRIX>
<ROWX X="0.00000000" Y="-1.00000000" Z="0.00000000" T="72.13549805"/>
<ROWY X="1.00000000" Y="0.00000000" Z="0.00000000" T="72.13549805"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="3">
<APPLY_TO_CHAIN CHAINID="B" NEW_CHAINID="G"/>
<TMATRIX>
<ROWX X="0.00000000" Y="1.00000000" Z="0.00000000" T="-72.13549805"/>
<ROWY X="-1.00000000" Y="0.00000000" Z="0.00000000" T="72.13549805"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<DELETE CHAINID="A"/>
<DELETE CHAINID="C"/>
<DELETE CHAINID="D"/>
</BIOMATRIX>
<MEMBRANE>
<NORMAL X="0.00000000" Y="0.00000000" Z="11.25000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-0.00000000"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-72.13549805"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-168.59999084"/>
</TMATRIX>
</MEMBRANE>
<SIDEDEFINITION Side1="Inside">
<NOTE>by similarity to chain: B (see TOPDB: AP00581)</NOTE>
</SIDEDEFINITION>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
MAHHHHHHHH HHGLVPRGSM TVATGDPVDE AAALPGHPQD TYDPEADHES
SERVVINISG LRFETQLKTL AQFPETLLGD PKKRMRYFDP LRNEYFFDRN
RPSFDAILYY YQSGGRLRRP VNVPLDIFSE EIRFYELGEE AMEMFREDEG
YIKEEERPLP ENEFQRQVWL LFEYPESSGP ARIIAIVSVM VILISIVSFC
LETLPIFRDE NEDMHGGGVT FHTYSQSTIG YQQSTSFTDP FFIVETLCII
WWSFEFLVRF FACPSKAGFF TNIMNIIDIV AIIPYYVTIF LTESNKSVLQ
FQNVRRVVQI FRIMRILRIF KLSRHSKGLQ ILGQTLKASM RELGLLIFFL
FIGVILFSSA VYFAEADERD SQFPSIPDAF WWAVVSMTTV GYGDMVPTTI
GGKIVGSLCA IAGVLTIALP VPVIVSNFNY FYHRETEGEE QAQYLQVTSS
PKIPSSPDLK KSRSASTISK SDYMEIQEGV NNSNEDFREE NLKTANSTLA
NTNYVNITKM LTDV
</SEQ>
<REGION seq_beg="1" pdb_beg="-18" seq_end="47" pdb_end="28" type="U"/>
<REGION seq_beg="48" pdb_beg="29" seq_end="183" pdb_end="164" type="1"/>
<REGION seq_beg="184" pdb_beg="165" seq_end="200" pdb_end="181" type="H"/>
<REGION seq_beg="201" pdb_beg="182" seq_end="243" pdb_end="224" type="2"/>
<REGION seq_beg="244" pdb_beg="225" seq_end="258" pdb_end="239" type="H"/>
<REGION seq_beg="259" pdb_beg="240" seq_end="275" pdb_end="256" type="1"/>
<REGION seq_beg="276" pdb_beg="257" seq_end="290" pdb_end="271" type="H"/>
<REGION seq_beg="291" pdb_beg="272" seq_end="310" pdb_end="291" type="2"/>
<REGION seq_beg="311" pdb_beg="292" seq_end="323" pdb_end="304" type="H"/>
<REGION seq_beg="324" pdb_beg="305" seq_end="326" pdb_end="307" type="1"/>
<REGION seq_beg="327" pdb_beg="308" seq_end="339" pdb_end="320" type="F"/>
<REGION seq_beg="340" pdb_beg="321" seq_end="343" pdb_end="324" type="1"/>
<REGION seq_beg="344" pdb_beg="325" seq_end="361" pdb_end="342" type="H"/>
<REGION seq_beg="362" pdb_beg="343" seq_end="380" pdb_end="361" type="2"/>
<REGION seq_beg="381" pdb_beg="362" seq_end="392" pdb_end="373" type="L"/>
<REGION seq_beg="393" pdb_beg="374" seq_end="403" pdb_end="384" type="2"/>
<REGION seq_beg="404" pdb_beg="385" seq_end="418" pdb_end="399" type="H"/>
<REGION seq_beg="419" pdb_beg="400" seq_end="433" pdb_end="414" type="F"/>
<REGION seq_beg="434" pdb_beg="415" seq_end="436" pdb_end="417" type="1"/>
<REGION seq_beg="437" pdb_beg="418" seq_end="514" pdb_end="495" type="U"/>
</CHAIN>
<CHAIN CHAINID="E" NUM_TM="6" TYPE="alpha">
<SEQ>
MAHHHHHHHH HHGLVPRGSM TVATGDPVDE AAALPGHPQD TYDPEADHES
SERVVINISG LRFETQLKTL AQFPETLLGD PKKRMRYFDP LRNEYFFDRN
RPSFDAILYY YQSGGRLRRP VNVPLDIFSE EIRFYELGEE AMEMFREDEG
YIKEEERPLP ENEFQRQVWL LFEYPESSGP ARIIAIVSVM VILISIVSFC
LETLPIFRDE NEDMHGGGVT FHTYSQSTIG YQQSTSFTDP FFIVETLCII
WWSFEFLVRF FACPSKAGFF TNIMNIIDIV AIIPYYVTIF LTESNKSVLQ
FQNVRRVVQI FRIMRILRIF KLSRHSKGLQ ILGQTLKASM RELGLLIFFL
FIGVILFSSA VYFAEADERD SQFPSIPDAF WWAVVSMTTV GYGDMVPTTI
GGKIVGSLCA IAGVLTIALP VPVIVSNFNY FYHRETEGEE QAQYLQVTSS
PKIPSSPDLK KSRSASTISK SDYMEIQEGV NNSNEDFREE NLKTANSTLA
NTNYVNITKM LTDV
</SEQ>
<REGION seq_beg="1" pdb_beg="-18" seq_end="47" pdb_end="28" type="U"/>
<REGION seq_beg="48" pdb_beg="29" seq_end="183" pdb_end="164" type="1"/>
<REGION seq_beg="184" pdb_beg="165" seq_end="200" pdb_end="181" type="H"/>
<REGION seq_beg="201" pdb_beg="182" seq_end="243" pdb_end="224" type="2"/>
<REGION seq_beg="244" pdb_beg="225" seq_end="258" pdb_end="239" type="H"/>
<REGION seq_beg="259" pdb_beg="240" seq_end="275" pdb_end="256" type="1"/>
<REGION seq_beg="276" pdb_beg="257" seq_end="290" pdb_end="271" type="H"/>
<REGION seq_beg="291" pdb_beg="272" seq_end="310" pdb_end="291" type="2"/>
<REGION seq_beg="311" pdb_beg="292" seq_end="323" pdb_end="304" type="H"/>
<REGION seq_beg="324" pdb_beg="305" seq_end="326" pdb_end="307" type="1"/>
<REGION seq_beg="327" pdb_beg="308" seq_end="339" pdb_end="320" type="F"/>
<REGION seq_beg="340" pdb_beg="321" seq_end="343" pdb_end="324" type="1"/>
<REGION seq_beg="344" pdb_beg="325" seq_end="361" pdb_end="342" type="H"/>
<REGION seq_beg="362" pdb_beg="343" seq_end="380" pdb_end="361" type="2"/>
<REGION seq_beg="381" pdb_beg="362" seq_end="392" pdb_end="373" type="L"/>
<REGION seq_beg="393" pdb_beg="374" seq_end="403" pdb_end="384" type="2"/>
<REGION seq_beg="404" pdb_beg="385" seq_end="418" pdb_end="399" type="H"/>
<REGION seq_beg="419" pdb_beg="400" seq_end="433" pdb_end="414" type="F"/>
<REGION seq_beg="434" pdb_beg="415" seq_end="436" pdb_end="417" type="1"/>
<REGION seq_beg="437" pdb_beg="418" seq_end="514" pdb_end="495" type="U"/>
</CHAIN>
<CHAIN CHAINID="F" NUM_TM="6" TYPE="alpha">
<SEQ>
MAHHHHHHHH HHGLVPRGSM TVATGDPVDE AAALPGHPQD TYDPEADHES
SERVVINISG LRFETQLKTL AQFPETLLGD PKKRMRYFDP LRNEYFFDRN
RPSFDAILYY YQSGGRLRRP VNVPLDIFSE EIRFYELGEE AMEMFREDEG
YIKEEERPLP ENEFQRQVWL LFEYPESSGP ARIIAIVSVM VILISIVSFC
LETLPIFRDE NEDMHGGGVT FHTYSQSTIG YQQSTSFTDP FFIVETLCII
WWSFEFLVRF FACPSKAGFF TNIMNIIDIV AIIPYYVTIF LTESNKSVLQ
FQNVRRVVQI FRIMRILRIF KLSRHSKGLQ ILGQTLKASM RELGLLIFFL
FIGVILFSSA VYFAEADERD SQFPSIPDAF WWAVVSMTTV GYGDMVPTTI
GGKIVGSLCA IAGVLTIALP VPVIVSNFNY FYHRETEGEE QAQYLQVTSS
PKIPSSPDLK KSRSASTISK SDYMEIQEGV NNSNEDFREE NLKTANSTLA
NTNYVNITKM LTDV
</SEQ>
<REGION seq_beg="1" pdb_beg="-18" seq_end="47" pdb_end="28" type="U"/>
<REGION seq_beg="48" pdb_beg="29" seq_end="183" pdb_end="164" type="1"/>
<REGION seq_beg="184" pdb_beg="165" seq_end="200" pdb_end="181" type="H"/>
<REGION seq_beg="201" pdb_beg="182" seq_end="243" pdb_end="224" type="2"/>
<REGION seq_beg="244" pdb_beg="225" seq_end="258" pdb_end="239" type="H"/>
<REGION seq_beg="259" pdb_beg="240" seq_end="275" pdb_end="256" type="1"/>
<REGION seq_beg="276" pdb_beg="257" seq_end="290" pdb_end="271" type="H"/>
<REGION seq_beg="291" pdb_beg="272" seq_end="310" pdb_end="291" type="2"/>
<REGION seq_beg="311" pdb_beg="292" seq_end="323" pdb_end="304" type="H"/>
<REGION seq_beg="324" pdb_beg="305" seq_end="326" pdb_end="307" type="1"/>
<REGION seq_beg="327" pdb_beg="308" seq_end="339" pdb_end="320" type="F"/>
<REGION seq_beg="340" pdb_beg="321" seq_end="343" pdb_end="324" type="1"/>
<REGION seq_beg="344" pdb_beg="325" seq_end="361" pdb_end="342" type="H"/>
<REGION seq_beg="362" pdb_beg="343" seq_end="380" pdb_end="361" type="2"/>
<REGION seq_beg="381" pdb_beg="362" seq_end="392" pdb_end="373" type="L"/>
<REGION seq_beg="393" pdb_beg="374" seq_end="403" pdb_end="384" type="2"/>
<REGION seq_beg="404" pdb_beg="385" seq_end="418" pdb_end="399" type="H"/>
<REGION seq_beg="419" pdb_beg="400" seq_end="433" pdb_end="414" type="F"/>
<REGION seq_beg="434" pdb_beg="415" seq_end="436" pdb_end="417" type="1"/>
<REGION seq_beg="437" pdb_beg="418" seq_end="514" pdb_end="495" type="U"/>
</CHAIN>
<CHAIN CHAINID="G" NUM_TM="6" TYPE="alpha">
<SEQ>
MAHHHHHHHH HHGLVPRGSM TVATGDPVDE AAALPGHPQD TYDPEADHES
SERVVINISG LRFETQLKTL AQFPETLLGD PKKRMRYFDP LRNEYFFDRN
RPSFDAILYY YQSGGRLRRP VNVPLDIFSE EIRFYELGEE AMEMFREDEG
YIKEEERPLP ENEFQRQVWL LFEYPESSGP ARIIAIVSVM VILISIVSFC
LETLPIFRDE NEDMHGGGVT FHTYSQSTIG YQQSTSFTDP FFIVETLCII
WWSFEFLVRF FACPSKAGFF TNIMNIIDIV AIIPYYVTIF LTESNKSVLQ
FQNVRRVVQI FRIMRILRIF KLSRHSKGLQ ILGQTLKASM RELGLLIFFL
FIGVILFSSA VYFAEADERD SQFPSIPDAF WWAVVSMTTV GYGDMVPTTI
GGKIVGSLCA IAGVLTIALP VPVIVSNFNY FYHRETEGEE QAQYLQVTSS
PKIPSSPDLK KSRSASTISK SDYMEIQEGV NNSNEDFREE NLKTANSTLA
NTNYVNITKM LTDV
</SEQ>
<REGION seq_beg="1" pdb_beg="-18" seq_end="47" pdb_end="28" type="U"/>
<REGION seq_beg="48" pdb_beg="29" seq_end="183" pdb_end="164" type="1"/>
<REGION seq_beg="184" pdb_beg="165" seq_end="200" pdb_end="181" type="H"/>
<REGION seq_beg="201" pdb_beg="182" seq_end="243" pdb_end="224" type="2"/>
<REGION seq_beg="244" pdb_beg="225" seq_end="258" pdb_end="239" type="H"/>
<REGION seq_beg="259" pdb_beg="240" seq_end="275" pdb_end="256" type="1"/>
<REGION seq_beg="276" pdb_beg="257" seq_end="290" pdb_end="271" type="H"/>
<REGION seq_beg="291" pdb_beg="272" seq_end="310" pdb_end="291" type="2"/>
<REGION seq_beg="311" pdb_beg="292" seq_end="323" pdb_end="304" type="H"/>
<REGION seq_beg="324" pdb_beg="305" seq_end="326" pdb_end="307" type="1"/>
<REGION seq_beg="327" pdb_beg="308" seq_end="339" pdb_end="320" type="F"/>
<REGION seq_beg="340" pdb_beg="321" seq_end="343" pdb_end="324" type="1"/>
<REGION seq_beg="344" pdb_beg="325" seq_end="361" pdb_end="342" type="H"/>
<REGION seq_beg="362" pdb_beg="343" seq_end="380" pdb_end="361" type="2"/>
<REGION seq_beg="381" pdb_beg="362" seq_end="392" pdb_end="373" type="L"/>
<REGION seq_beg="393" pdb_beg="374" seq_end="403" pdb_end="384" type="2"/>
<REGION seq_beg="404" pdb_beg="385" seq_end="418" pdb_end="399" type="H"/>
<REGION seq_beg="419" pdb_beg="400" seq_end="433" pdb_end="414" type="F"/>
<REGION seq_beg="434" pdb_beg="415" seq_end="436" pdb_end="417" type="1"/>
<REGION seq_beg="437" pdb_beg="418" seq_end="514" pdb_end="495" type="U"/>
</CHAIN>
</pdbtm>
Overview
3lnm
PDB code:3lnm
Chain(s):B[6], E[6], F[6], G[6]
PDBTM type:Tm_Alpha
Title:F233W MUTANT OF THE KV2.1 PADDLE-KV1.2 CHIMERA CHANNEL
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Cross references