Content of 3j5p <?xml version="1.0" encoding="iso-8859-1"?> <pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm_data.enzim.hu/pdbtm.xsd pdbtm.xsd" ID="3j5p" TMP="yes"> <COPYRIGHT> All information, data and files are copyright. PDBTM database is produced in the Institute of Enzymology, Budapest, Hungary. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed from entries. Usage by and for commercial entities requires a license agreement (send an email to pdbtm at enzim dot hu). </COPYRIGHT> <CREATE_DATE>2013-12-16</CREATE_DATE> <MODIFICATION> <DATE>2013-12-16</DATE> <DESCR>Interfacial helix detected.</DESCR> </MODIFICATION> <MODIFICATION> <DATE>2013-12-17</DATE> <DESCR>Sidedefinition added</DESCR> </MODIFICATION> <RAWRES> <TMRES>64.84</TMRES> <TMTYPE>Tm_Alpha</TMTYPE> <SPRES>Unknown</SPRES> <PDBKWRES>no</PDBKWRES> </RAWRES> <MEMBRANE> <NORMAL X="-0.00032204" Y="-0.00114004" Z="16.50000000"/> <TMATRIX> <ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-0.00339142"/> <ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-0.00365559"/> <ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="21.11176300"/> </TMATRIX> </MEMBRANE> <SIDEDEFINITION Side1="Outside"> <NOTE>According to 10.1038/NATURE12823/Fig1</NOTE> </SIDEDEFINITION> <CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha"> <SEQ> LYDRRSIFDA VAQSNCQELE SLLPFLQRSK KRLTDSEFKD PETGKTCLLK AMLNLHNGQN DTIALLLDVA RKTDSLKQFV NASYTDSYYK GQTALHIAIE RRNMTLVTLL VENGADVQAA ANGDFFKKTK GRPGFYFGEL PLSLAACTNQ LAIVKFLLQN SWQPADISAR DSVGNTVLHA LVEVADNTVD NTKFVTSMYN EILILGAKLH PTLKLEEITN RKGLTPLALA ASSGKIGVLA YILQREIHEP ECRHLSRKFT EWAYGPVHSS LYDLSCIDTC EKNSVLEVIA YSSSETPNRH DMLLVEPLNR LLQDKWDRFV KRIFYFNFFV YCLYMIIFTA AAYYRPVEGL PPYKLKNTVG DYFRVTGEIL SVSGGVYFFF RGIQYFLQRR PSLKSLFVDS YSEILFFVQS LFMLVSVVLY FSQRKEYVAS MVFSLAMGWT NMLYYTRGFQ QMGIYAVMIE KMILRDLCRF MFVYLVFLFG FSTAVVTLIE DGKYNSLYST CLELFKFTIG MGDLEFTENY DFKAVFIILL LAYVILTYIL LLNMLIALMG ETVNKIAQES KNIWKLQRAI TILDTEKSFL KCMRKAUUUU UUUUUUUU </SEQ> <REGION seq_beg="1" pdb_beg="111" seq_end="322" pdb_end="432" type="2"/> <REGION seq_beg="323" pdb_beg="433" seq_end="344" pdb_end="454" type="H"/> <REGION seq_beg="345" pdb_beg="455" seq_end="363" pdb_end="473" type="1"/> <REGION seq_beg="364" pdb_beg="474" seq_end="388" pdb_end="498" type="H"/> <REGION seq_beg="389" pdb_beg="499" seq_end="392" pdb_end="502" type="2"/> <REGION seq_beg="393" pdb_beg="503" seq_end="397" pdb_end="507" type="U"/> <REGION seq_beg="398" pdb_beg="508" seq_end="398" pdb_end="508" type="2"/> <REGION seq_beg="399" pdb_beg="509" seq_end="422" pdb_end="532" type="H"/> <REGION seq_beg="423" pdb_beg="533" seq_end="426" pdb_end="536" type="1"/> <REGION seq_beg="427" pdb_beg="537" seq_end="447" pdb_end="557" type="H"/> <REGION seq_beg="448" pdb_beg="558" seq_end="449" pdb_end="559" type="2"/> <REGION seq_beg="450" pdb_beg="560" seq_end="455" pdb_end="565" type="F"/> <REGION seq_beg="456" pdb_beg="566" seq_end="488" pdb_end="598" type="H"/> <REGION seq_beg="489" pdb_beg="599" seq_end="497" pdb_end="630" type="1"/> <REGION seq_beg="498" pdb_beg="631" seq_end="515" pdb_end="648" type="L"/> <REGION seq_beg="516" pdb_beg="649" seq_end="524" pdb_end="657" type="1"/> <REGION seq_beg="525" pdb_beg="658" seq_end="550" pdb_end="683" type="H"/> <REGION seq_beg="551" pdb_beg="684" seq_end="577" pdb_end="710" type="F"/> <REGION seq_beg="578" pdb_beg="711" seq_end="597" pdb_end="762" type="2"/> <REGION seq_beg="598" pdb_beg="763" seq_end="598" pdb_end="763" type="U"/> </CHAIN> <CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha"> <SEQ> LYDRRSIFDA VAQSNCQELE SLLPFLQRSK KRLTDSEFKD PETGKTCLLK AMLNLHNGQN DTIALLLDVA RKTDSLKQFV NASYTDSYYK GQTALHIAIE RRNMTLVTLL VENGADVQAA ANGDFFKKTK GRPGFYFGEL PLSLAACTNQ LAIVKFLLQN SWQPADISAR DSVGNTVLHA LVEVADNTVD NTKFVTSMYN EILILGAKLH PTLKLEEITN RKGLTPLALA ASSGKIGVLA YILQREIHEP ECRHLSRKFT EWAYGPVHSS LYDLSCIDTC EKNSVLEVIA YSSSETPNRH DMLLVEPLNR LLQDKWDRFV KRIFYFNFFV YCLYMIIFTA AAYYRPVEGL PPYKLKNTVG DYFRVTGEIL SVSGGVYFFF RGIQYFLQRR PSLKSLFVDS YSEILFFVQS LFMLVSVVLY FSQRKEYVAS MVFSLAMGWT NMLYYTRGFQ QMGIYAVMIE KMILRDLCRF MFVYLVFLFG FSTAVVTLIE DGKYNSLYST CLELFKFTIG MGDLEFTENY DFKAVFIILL LAYVILTYIL LLNMLIALMG ETVNKIAQES KNIWKLQRAI TILDTEKSFL KCMRKAUUUU UUUUUUUU </SEQ> <REGION seq_beg="1" pdb_beg="111" seq_end="322" pdb_end="432" type="2"/> <REGION seq_beg="323" pdb_beg="433" seq_end="344" pdb_end="454" type="H"/> <REGION seq_beg="345" pdb_beg="455" seq_end="363" pdb_end="473" type="1"/> <REGION seq_beg="364" pdb_beg="474" seq_end="388" pdb_end="498" type="H"/> <REGION seq_beg="389" pdb_beg="499" seq_end="392" pdb_end="502" type="2"/> <REGION seq_beg="393" pdb_beg="503" seq_end="397" pdb_end="507" type="U"/> <REGION seq_beg="398" pdb_beg="508" seq_end="398" pdb_end="508" type="2"/> <REGION seq_beg="399" pdb_beg="509" seq_end="422" pdb_end="532" type="H"/> <REGION seq_beg="423" pdb_beg="533" seq_end="426" pdb_end="536" type="1"/> <REGION seq_beg="427" pdb_beg="537" seq_end="447" pdb_end="557" type="H"/> <REGION seq_beg="448" pdb_beg="558" seq_end="449" pdb_end="559" type="2"/> <REGION seq_beg="450" pdb_beg="560" seq_end="455" pdb_end="565" type="F"/> <REGION seq_beg="456" pdb_beg="566" seq_end="488" pdb_end="598" type="H"/> <REGION seq_beg="489" pdb_beg="599" seq_end="497" pdb_end="630" type="1"/> <REGION seq_beg="498" pdb_beg="631" seq_end="515" pdb_end="648" type="L"/> <REGION seq_beg="516" pdb_beg="649" seq_end="524" pdb_end="657" type="1"/> <REGION seq_beg="525" pdb_beg="658" seq_end="550" pdb_end="683" type="H"/> <REGION seq_beg="551" pdb_beg="684" seq_end="577" pdb_end="710" type="F"/> <REGION seq_beg="578" pdb_beg="711" seq_end="597" pdb_end="762" type="2"/> <REGION seq_beg="598" pdb_beg="763" seq_end="598" pdb_end="763" type="U"/> </CHAIN> <CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha"> <SEQ> LYDRRSIFDA VAQSNCQELE SLLPFLQRSK KRLTDSEFKD PETGKTCLLK AMLNLHNGQN DTIALLLDVA RKTDSLKQFV NASYTDSYYK GQTALHIAIE RRNMTLVTLL VENGADVQAA ANGDFFKKTK GRPGFYFGEL PLSLAACTNQ LAIVKFLLQN SWQPADISAR DSVGNTVLHA LVEVADNTVD NTKFVTSMYN EILILGAKLH PTLKLEEITN RKGLTPLALA ASSGKIGVLA YILQREIHEP ECRHLSRKFT EWAYGPVHSS LYDLSCIDTC EKNSVLEVIA YSSSETPNRH DMLLVEPLNR LLQDKWDRFV KRIFYFNFFV YCLYMIIFTA AAYYRPVEGL PPYKLKNTVG DYFRVTGEIL SVSGGVYFFF RGIQYFLQRR PSLKSLFVDS YSEILFFVQS LFMLVSVVLY FSQRKEYVAS MVFSLAMGWT NMLYYTRGFQ QMGIYAVMIE KMILRDLCRF MFVYLVFLFG FSTAVVTLIE DGKYNSLYST CLELFKFTIG MGDLEFTENY DFKAVFIILL LAYVILTYIL LLNMLIALMG ETVNKIAQES KNIWKLQRAI TILDTEKSFL KCMRKAUUUU UUUUUUUU </SEQ> <REGION seq_beg="1" pdb_beg="111" seq_end="322" pdb_end="432" type="2"/> <REGION seq_beg="323" pdb_beg="433" seq_end="344" pdb_end="454" type="H"/> <REGION seq_beg="345" pdb_beg="455" seq_end="363" pdb_end="473" type="1"/> <REGION seq_beg="364" pdb_beg="474" seq_end="388" pdb_end="498" type="H"/> <REGION seq_beg="389" pdb_beg="499" seq_end="392" pdb_end="502" type="2"/> <REGION seq_beg="393" pdb_beg="503" seq_end="397" pdb_end="507" type="U"/> <REGION seq_beg="398" pdb_beg="508" seq_end="398" pdb_end="508" type="2"/> <REGION seq_beg="399" pdb_beg="509" seq_end="422" pdb_end="532" type="H"/> <REGION seq_beg="423" pdb_beg="533" seq_end="426" pdb_end="536" type="1"/> <REGION seq_beg="427" pdb_beg="537" seq_end="447" pdb_end="557" type="H"/> <REGION seq_beg="448" pdb_beg="558" seq_end="449" pdb_end="559" type="2"/> <REGION seq_beg="450" pdb_beg="560" seq_end="455" pdb_end="565" type="F"/> <REGION seq_beg="456" pdb_beg="566" seq_end="488" pdb_end="598" type="H"/> <REGION seq_beg="489" pdb_beg="599" seq_end="497" pdb_end="630" type="1"/> <REGION seq_beg="498" pdb_beg="631" seq_end="515" pdb_end="648" type="L"/> <REGION seq_beg="516" pdb_beg="649" seq_end="524" pdb_end="657" type="1"/> <REGION seq_beg="525" pdb_beg="658" seq_end="550" pdb_end="683" type="H"/> <REGION seq_beg="551" pdb_beg="684" seq_end="577" pdb_end="710" type="F"/> <REGION seq_beg="578" pdb_beg="711" seq_end="597" pdb_end="762" type="2"/> <REGION seq_beg="598" pdb_beg="763" seq_end="598" pdb_end="763" type="U"/> </CHAIN> <CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha"> <SEQ> LYDRRSIFDA VAQSNCQELE SLLPFLQRSK KRLTDSEFKD PETGKTCLLK AMLNLHNGQN DTIALLLDVA RKTDSLKQFV NASYTDSYYK GQTALHIAIE RRNMTLVTLL VENGADVQAA ANGDFFKKTK GRPGFYFGEL PLSLAACTNQ LAIVKFLLQN SWQPADISAR DSVGNTVLHA LVEVADNTVD NTKFVTSMYN EILILGAKLH PTLKLEEITN RKGLTPLALA ASSGKIGVLA YILQREIHEP ECRHLSRKFT EWAYGPVHSS LYDLSCIDTC EKNSVLEVIA YSSSETPNRH DMLLVEPLNR LLQDKWDRFV KRIFYFNFFV YCLYMIIFTA AAYYRPVEGL PPYKLKNTVG DYFRVTGEIL SVSGGVYFFF RGIQYFLQRR PSLKSLFVDS YSEILFFVQS LFMLVSVVLY FSQRKEYVAS MVFSLAMGWT NMLYYTRGFQ QMGIYAVMIE KMILRDLCRF MFVYLVFLFG FSTAVVTLIE DGKYNSLYST CLELFKFTIG MGDLEFTENY DFKAVFIILL LAYVILTYIL LLNMLIALMG ETVNKIAQES KNIWKLQRAI TILDTEKSFL KCMRKAUUUU UUUUUUUU </SEQ> <REGION seq_beg="1" pdb_beg="111" seq_end="322" pdb_end="432" type="2"/> <REGION seq_beg="323" pdb_beg="433" seq_end="344" pdb_end="454" type="H"/> <REGION seq_beg="345" pdb_beg="455" seq_end="363" pdb_end="473" type="1"/> <REGION seq_beg="364" pdb_beg="474" seq_end="388" pdb_end="498" type="H"/> <REGION seq_beg="389" pdb_beg="499" seq_end="392" pdb_end="502" type="2"/> <REGION seq_beg="393" pdb_beg="503" seq_end="397" pdb_end="507" type="U"/> <REGION seq_beg="398" pdb_beg="508" seq_end="398" pdb_end="508" type="2"/> <REGION seq_beg="399" pdb_beg="509" seq_end="422" pdb_end="532" type="H"/> <REGION seq_beg="423" pdb_beg="533" seq_end="426" pdb_end="536" type="1"/> <REGION seq_beg="427" pdb_beg="537" seq_end="447" pdb_end="557" type="H"/> <REGION seq_beg="448" pdb_beg="558" seq_end="449" pdb_end="559" type="2"/> <REGION seq_beg="450" pdb_beg="560" seq_end="455" pdb_end="565" type="F"/> <REGION seq_beg="456" pdb_beg="566" seq_end="488" pdb_end="598" type="H"/> <REGION seq_beg="489" pdb_beg="599" seq_end="497" pdb_end="630" type="1"/> <REGION seq_beg="498" pdb_beg="631" seq_end="515" pdb_end="648" type="L"/> <REGION seq_beg="516" pdb_beg="649" seq_end="524" pdb_end="657" type="1"/> <REGION seq_beg="525" pdb_beg="658" seq_end="550" pdb_end="683" type="H"/> <REGION seq_beg="551" pdb_beg="684" seq_end="577" pdb_end="710" type="F"/> <REGION seq_beg="578" pdb_beg="711" seq_end="597" pdb_end="762" type="2"/> <REGION seq_beg="598" pdb_beg="763" seq_end="598" pdb_end="763" type="U"/> </CHAIN> </pdbtm>
| Overview  PDB code: | 3j5p | | | Chain(s): | B[6], A[6], C[6], D[6] | | | PDBTM type: | Tm_Alpha | | | Title: | STRUCTURE OF TRPV1 ION CHANNEL DETERMINED BY SINGLE PARTICLE ELECTRON CRYO-MICROSCOPY |
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