PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2021-11-26
Number of transmembrane proteins: 6657 (alpha: 6128 , beta: 477 )
Content of 1z9k
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm.enzim.hu/data/pdbtm.xsd pdbtm.xsd" ID="1z9k" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2005-06-09</CREATE_DATE>
<MODIFICATION>
<DATE>2005-07-22</DATE>
<DESCR>Model has been recalculated by TMDET version 2.0</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2012-03-08</DATE>
<DESCR>PDB entry has been changed</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2012-06-15</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2013-05-10</DATE>
<DESCR>Sidedefinition added</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>76.64</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>no</PDBKWRES>
</RAWRES>
<BIOMATRIX>
<MATRIX ID="1">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="D"/>
<APPLY_TO_CHAIN CHAINID="B" NEW_CHAINID="E"/>
<APPLY_TO_CHAIN CHAINID="C" NEW_CHAINID="F"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="0.00000000"/>
<ROWY X="0.00000000" Y="-1.00000000" Z="0.00000000" T="207.80000305"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="-1.00000000" T="107.50000000"/>
</TMATRIX>
</MATRIX>
<DELETE CHAINID="D"/>
<DELETE CHAINID="E"/>
<DELETE CHAINID="F"/>
</BIOMATRIX>
<MEMBRANE>
<NORMAL X="0.00000000" Y="0.00000000" Z="13.00000000"/>
<TMATRIX>
<ROWX X="0.72657865" Y="0.68327802" Z="0.07221173" T="-72.60045624"/>
<ROWY X="0.00000000" Y="0.10509896" Z="-0.99446177" T="29.83483887"/>
<ROWZ X="-0.68708324" Y="0.72255474" Z="0.07636267" T="-29.88213730"/>
</TMATRIX>
</MEMBRANE>
<SIDEDEFINITION Side1="Outside">
<NOTE>see TOPDB: AP00290</NOTE>
</SIDEDEFINITION>
<CHAIN CHAINID="A" NUM_TM="5" TYPE="alpha">
<SEQ>
ALLSFERKYR VPGGTLVGGN LFDFWVGPFY VGFFGVATFF FAALGIILIA
WSAVLQGTWN PQLISVYPPA LEYGLGGAPL AKGGLWQIIT ICATGAFVSW
ALREVEICRK LGIGYHIPFA FAFAILAYLT LVLFRPVMMG AWGYAFPYGI
WTHLDWVSNT GYTYGNFHYN PAHMIAISFF FTNALALALH GALVLSAANP
EKGKEMRTPD HEDTFFRDLV GYSIGTLGIH RLGLLLSLSA VFFSALCMII
TGTIWFDQWV DWWQWWVKLP WWANIPGGIN G
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="33" pdb_end="33" type="2"/>
<REGION seq_beg="34" pdb_beg="34" seq_end="50" pdb_end="50" type="H"/>
<REGION seq_beg="51" pdb_beg="51" seq_end="88" pdb_end="88" type="1"/>
<REGION seq_beg="89" pdb_beg="89" seq_end="105" pdb_end="105" type="H"/>
<REGION seq_beg="106" pdb_beg="106" seq_end="117" pdb_end="117" type="2"/>
<REGION seq_beg="118" pdb_beg="118" seq_end="134" pdb_end="134" type="H"/>
<REGION seq_beg="135" pdb_beg="135" seq_end="153" pdb_end="153" type="1"/>
<REGION seq_beg="154" pdb_beg="154" seq_end="162" pdb_end="162" type="F"/>
<REGION seq_beg="163" pdb_beg="163" seq_end="171" pdb_end="171" type="1"/>
<REGION seq_beg="172" pdb_beg="172" seq_end="189" pdb_end="189" type="H"/>
<REGION seq_beg="190" pdb_beg="190" seq_end="231" pdb_end="231" type="2"/>
<REGION seq_beg="232" pdb_beg="232" seq_end="249" pdb_end="249" type="H"/>
<REGION seq_beg="250" pdb_beg="250" seq_end="281" pdb_end="281" type="1"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="5" TYPE="alpha">
<SEQ>
AEYQNIFSQV QVRGPADLGM TEDVNLANRS GVGPFSTLLG WFGNAQLGPI
YLGSLGVLSL FSGLMWFFTI GIWFWYQAGW NPAVFLRDLF FFSLEPPAPE
YGLSFAAPLK EGGLWLIASF FMFVAVWSWW GRTYLRAQAL GMGKHTAWAF
LSAIWLWMVL GFIRPILMGS WSEAVPYGIF SHLDWTNNFS LVHGNLFYNP
FHGLSIAFLY GSALLFAMHG ATILAVSRFG GERELEQIAD RGTAAERAAL
FWRWTMGFNA TMEGIHRWAI WMAVLVTLTG GIGILLSGTV VDNWYVWGQN
HGMAPLN
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="55" pdb_end="55" type="2"/>
<REGION seq_beg="56" pdb_beg="56" seq_end="72" pdb_end="72" type="H"/>
<REGION seq_beg="73" pdb_beg="73" seq_end="115" pdb_end="115" type="1"/>
<REGION seq_beg="116" pdb_beg="116" seq_end="131" pdb_end="131" type="H"/>
<REGION seq_beg="132" pdb_beg="132" seq_end="147" pdb_end="147" type="2"/>
<REGION seq_beg="148" pdb_beg="148" seq_end="167" pdb_end="167" type="H"/>
<REGION seq_beg="168" pdb_beg="168" seq_end="178" pdb_end="178" type="1"/>
<REGION seq_beg="179" pdb_beg="179" seq_end="190" pdb_end="190" type="F"/>
<REGION seq_beg="191" pdb_beg="191" seq_end="199" pdb_end="199" type="1"/>
<REGION seq_beg="200" pdb_beg="200" seq_end="218" pdb_end="218" type="H"/>
<REGION seq_beg="219" pdb_beg="219" seq_end="268" pdb_end="268" type="2"/>
<REGION seq_beg="269" pdb_beg="269" seq_end="286" pdb_end="286" type="H"/>
<REGION seq_beg="287" pdb_beg="287" seq_end="302" pdb_end="302" type="1"/>
<REGION seq_beg="303" pdb_beg="303" seq_end="307" pdb_end="307" type="U"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="1" TYPE="alpha">
<SEQ>
MVGVTAFGNF DLASLAIYSF WIFLAGLIYY LQTENMREGY PLENEDGTPA
ANQGPFPLPK PKTFILPHGR GTLTVPGPES EDRPIALART AVSEGFPHAP
TGDPMKDGVG PASWVARRDL PELDGHGHNK IKPMKAAAGF HVSAGKNPIG
LPVRGCDLEI AGKVVDIWVD IPEQMARFLE VELKDGSTRL LPMQMVKVQS
NRVHVNALSS DLFAGIPTIK SPTEVTLLEE DKICGYVAGG LMYAAPKRKS
VVAAMLAEYA
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="10" pdb_end="10" type="U"/>
<REGION seq_beg="11" pdb_beg="11" seq_end="11" pdb_end="11" type="1"/>
<REGION seq_beg="12" pdb_beg="12" seq_end="29" pdb_end="29" type="H"/>
<REGION seq_beg="30" pdb_beg="30" seq_end="248" pdb_end="248" type="2"/>
<REGION seq_beg="249" pdb_beg="249" seq_end="260" pdb_end="260" type="U"/>
</CHAIN>
</pdbtm>
Overview
1z9k
PDB code:1z9k
Chain(s):
PDBTM type:Tm_Alpha
Title:PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES
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