PDBTM: Protein Data Bank of Transmembrane Proteins
PDBTM version: 2022-09-23
Number of transmembrane proteins: 7723 (alpha: 7152 , beta: 511 )
Content of 1j4n
<?xml version="1.0" encoding="iso-8859-1"?>
<pdbtm xmlns="http://pdbtm.enzim.hu" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pdbtm.enzim.hu/data/pdbtm.xsd pdbtm.xsd" ID="1j4n" TMP="yes">
<COPYRIGHT>
All information, data and files are copyright. PDBTM database is
produced in the Institute of Enzymology, Budapest, Hungary. There
are no restrictions on its use by non-profit institutions as long
as its content is in no way modified and this statement is not
removed from entries. Usage by and for commercial entities requires
a license agreement (send an email to pdbtm at enzim dot hu).
</COPYRIGHT>
<CREATE_DATE>2003-08-11</CREATE_DATE>
<MODIFICATION>
<DATE>2004-09-16</DATE>
<DESCR>Membrane planes are modified</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2005-04-06</DATE>
<DESCR>Format has been changed to pdbtm format v2.0</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2005-07-20</DATE>
<DESCR>Model has been recalculated by TMDET version 2.0</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2012-03-08</DATE>
<DESCR>PDB entry has been changed</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2012-06-15</DATE>
<DESCR>Interfacial helix detected.</DESCR>
</MODIFICATION>
<MODIFICATION>
<DATE>2013-05-10</DATE>
<DESCR>Sidedefinition added</DESCR>
</MODIFICATION>
<RAWRES>
<TMRES>69.68</TMRES>
<TMTYPE>Tm_Alpha</TMTYPE>
<SPRES>Unknown</SPRES>
<PDBKWRES>yes</PDBKWRES>
</RAWRES>
<BIOMATRIX>
<MATRIX ID="1">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="B"/>
<TMATRIX>
<ROWX X="-1.00000000" Y="0.00000000" Z="0.00000000" T="93.33100128"/>
<ROWY X="0.00000000" Y="-1.00000000" Z="0.00000000" T="93.33100128"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="2">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="C"/>
<TMATRIX>
<ROWX X="0.00000000" Y="-1.00000000" Z="0.00000000" T="93.33100128"/>
<ROWY X="1.00000000" Y="0.00000000" Z="0.00000000" T="0.00000000"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="3">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="D"/>
<TMATRIX>
<ROWX X="0.00000000" Y="1.00000000" Z="0.00000000" T="0.00000000"/>
<ROWY X="-1.00000000" Y="0.00000000" Z="0.00000000" T="93.33100128"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="4">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="E"/>
<TMATRIX>
<ROWX X="-1.00000000" Y="0.00000000" Z="0.00000000" T="93.33100128"/>
<ROWY X="0.00000000" Y="-1.00000000" Z="0.00000000" T="93.33100128"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="5">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="F"/>
<TMATRIX>
<ROWX X="0.00000000" Y="-1.00000000" Z="0.00000000" T="93.33100128"/>
<ROWY X="1.00000000" Y="0.00000000" Z="0.00000000" T="0.00000000"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="6">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="G"/>
<TMATRIX>
<ROWX X="0.00000000" Y="1.00000000" Z="0.00000000" T="0.00000000"/>
<ROWY X="-1.00000000" Y="0.00000000" Z="0.00000000" T="93.33100128"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="7">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="H"/>
<TMATRIX>
<ROWX X="-1.00000000" Y="0.00000000" Z="0.00000000" T="93.33100128"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="0.00000000"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="-1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="8">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="I"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="0.00000000"/>
<ROWY X="0.00000000" Y="-1.00000000" Z="0.00000000" T="93.33100128"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="-1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="9">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="J"/>
<TMATRIX>
<ROWX X="0.00000000" Y="1.00000000" Z="0.00000000" T="0.00000000"/>
<ROWY X="1.00000000" Y="0.00000000" Z="0.00000000" T="0.00000000"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="-1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<MATRIX ID="10">
<APPLY_TO_CHAIN CHAINID="A" NEW_CHAINID="K"/>
<TMATRIX>
<ROWX X="0.00000000" Y="-1.00000000" Z="0.00000000" T="93.33100128"/>
<ROWY X="-1.00000000" Y="0.00000000" Z="0.00000000" T="93.33100128"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="-1.00000000" T="0.00000000"/>
</TMATRIX>
</MATRIX>
<DELETE CHAINID="E"/>
<DELETE CHAINID="F"/>
<DELETE CHAINID="G"/>
<DELETE CHAINID="H"/>
<DELETE CHAINID="I"/>
<DELETE CHAINID="J"/>
<DELETE CHAINID="K"/>
</BIOMATRIX>
<MEMBRANE>
<NORMAL X="0.00000004" Y="0.00000001" Z="14.00000000"/>
<TMATRIX>
<ROWX X="1.00000000" Y="0.00000000" Z="0.00000000" T="-46.66551590"/>
<ROWY X="0.00000000" Y="1.00000000" Z="0.00000000" T="-46.66543579"/>
<ROWZ X="0.00000000" Y="0.00000000" Z="1.00000000" T="-26.24099922"/>
</TMATRIX>
</MEMBRANE>
<SIDEDEFINITION Side1="Inside">
<NOTE>see TOPDB: AP00395</NOTE>
</SIDEDEFINITION>
<CHAIN CHAINID="A" NUM_TM="6" TYPE="alpha">
<SEQ>
MASEFKKKLF WRAVVAEFLA MILFIFISIG SALGFHYPIK SNQTTGAVQD
NVKVSLAFGL SIATLAQSVG HISGAHLNPA VTLGLLLSCQ ISVLRAIMYI
IAQCVGAIVA TAILSGITSS LPDNSLGLNA LAPGVNSGQG LGIEIIGTLQ
LVLCVLATTD RRRRDLGGSG PLAIGFSVAL GHLLAIDYTG CGINPARSFG
SSVITHNFQD HWIFWVGPFI GAALAVLIYD FILAPRSSDL TDRVKVWTSG
QVEEYDLDAD DINSRVEMKP K
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="11" pdb_end="11" type="1"/>
<REGION seq_beg="12" pdb_beg="12" seq_end="32" pdb_end="32" type="H"/>
<REGION seq_beg="33" pdb_beg="33" seq_end="51" pdb_end="51" type="2"/>
<REGION seq_beg="52" pdb_beg="52" seq_end="70" pdb_end="70" type="H"/>
<REGION seq_beg="71" pdb_beg="71" seq_end="72" pdb_end="72" type="1"/>
<REGION seq_beg="73" pdb_beg="73" seq_end="88" pdb_end="88" type="L"/>
<REGION seq_beg="89" pdb_beg="89" seq_end="93" pdb_end="93" type="1"/>
<REGION seq_beg="94" pdb_beg="94" seq_end="114" pdb_end="114" type="H"/>
<REGION seq_beg="115" pdb_beg="115" seq_end="141" pdb_end="141" type="2"/>
<REGION seq_beg="142" pdb_beg="142" seq_end="159" pdb_end="159" type="H"/>
<REGION seq_beg="160" pdb_beg="160" seq_end="168" pdb_end="168" type="1"/>
<REGION seq_beg="169" pdb_beg="169" seq_end="186" pdb_end="186" type="H"/>
<REGION seq_beg="187" pdb_beg="187" seq_end="190" pdb_end="190" type="2"/>
<REGION seq_beg="191" pdb_beg="191" seq_end="204" pdb_end="204" type="L"/>
<REGION seq_beg="205" pdb_beg="205" seq_end="211" pdb_end="211" type="2"/>
<REGION seq_beg="212" pdb_beg="212" seq_end="233" pdb_end="233" type="H"/>
<REGION seq_beg="234" pdb_beg="234" seq_end="239" pdb_end="239" type="1"/>
<REGION seq_beg="240" pdb_beg="240" seq_end="247" pdb_end="247" type="F"/>
<REGION seq_beg="248" pdb_beg="248" seq_end="249" pdb_end="249" type="1"/>
<REGION seq_beg="250" pdb_beg="250" seq_end="271" pdb_end="271" type="U"/>
</CHAIN>
<CHAIN CHAINID="B" NUM_TM="6" TYPE="alpha">
<SEQ>
MASEFKKKLF WRAVVAEFLA MILFIFISIG SALGFHYPIK SNQTTGAVQD
NVKVSLAFGL SIATLAQSVG HISGAHLNPA VTLGLLLSCQ ISVLRAIMYI
IAQCVGAIVA TAILSGITSS LPDNSLGLNA LAPGVNSGQG LGIEIIGTLQ
LVLCVLATTD RRRRDLGGSG PLAIGFSVAL GHLLAIDYTG CGINPARSFG
SSVITHNFQD HWIFWVGPFI GAALAVLIYD FILAPRSSDL TDRVKVWTSG
QVEEYDLDAD DINSRVEMKP K
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="11" pdb_end="11" type="1"/>
<REGION seq_beg="12" pdb_beg="12" seq_end="32" pdb_end="32" type="H"/>
<REGION seq_beg="33" pdb_beg="33" seq_end="51" pdb_end="51" type="2"/>
<REGION seq_beg="52" pdb_beg="52" seq_end="70" pdb_end="70" type="H"/>
<REGION seq_beg="71" pdb_beg="71" seq_end="72" pdb_end="72" type="1"/>
<REGION seq_beg="73" pdb_beg="73" seq_end="88" pdb_end="88" type="L"/>
<REGION seq_beg="89" pdb_beg="89" seq_end="93" pdb_end="93" type="1"/>
<REGION seq_beg="94" pdb_beg="94" seq_end="114" pdb_end="114" type="H"/>
<REGION seq_beg="115" pdb_beg="115" seq_end="141" pdb_end="141" type="2"/>
<REGION seq_beg="142" pdb_beg="142" seq_end="159" pdb_end="159" type="H"/>
<REGION seq_beg="160" pdb_beg="160" seq_end="168" pdb_end="168" type="1"/>
<REGION seq_beg="169" pdb_beg="169" seq_end="186" pdb_end="186" type="H"/>
<REGION seq_beg="187" pdb_beg="187" seq_end="190" pdb_end="190" type="2"/>
<REGION seq_beg="191" pdb_beg="191" seq_end="204" pdb_end="204" type="L"/>
<REGION seq_beg="205" pdb_beg="205" seq_end="211" pdb_end="211" type="2"/>
<REGION seq_beg="212" pdb_beg="212" seq_end="233" pdb_end="233" type="H"/>
<REGION seq_beg="234" pdb_beg="234" seq_end="239" pdb_end="239" type="1"/>
<REGION seq_beg="240" pdb_beg="240" seq_end="247" pdb_end="247" type="F"/>
<REGION seq_beg="248" pdb_beg="248" seq_end="249" pdb_end="249" type="1"/>
<REGION seq_beg="250" pdb_beg="250" seq_end="271" pdb_end="271" type="U"/>
</CHAIN>
<CHAIN CHAINID="C" NUM_TM="6" TYPE="alpha">
<SEQ>
MASEFKKKLF WRAVVAEFLA MILFIFISIG SALGFHYPIK SNQTTGAVQD
NVKVSLAFGL SIATLAQSVG HISGAHLNPA VTLGLLLSCQ ISVLRAIMYI
IAQCVGAIVA TAILSGITSS LPDNSLGLNA LAPGVNSGQG LGIEIIGTLQ
LVLCVLATTD RRRRDLGGSG PLAIGFSVAL GHLLAIDYTG CGINPARSFG
SSVITHNFQD HWIFWVGPFI GAALAVLIYD FILAPRSSDL TDRVKVWTSG
QVEEYDLDAD DINSRVEMKP K
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="11" pdb_end="11" type="1"/>
<REGION seq_beg="12" pdb_beg="12" seq_end="32" pdb_end="32" type="H"/>
<REGION seq_beg="33" pdb_beg="33" seq_end="51" pdb_end="51" type="2"/>
<REGION seq_beg="52" pdb_beg="52" seq_end="70" pdb_end="70" type="H"/>
<REGION seq_beg="71" pdb_beg="71" seq_end="72" pdb_end="72" type="1"/>
<REGION seq_beg="73" pdb_beg="73" seq_end="88" pdb_end="88" type="L"/>
<REGION seq_beg="89" pdb_beg="89" seq_end="93" pdb_end="93" type="1"/>
<REGION seq_beg="94" pdb_beg="94" seq_end="114" pdb_end="114" type="H"/>
<REGION seq_beg="115" pdb_beg="115" seq_end="141" pdb_end="141" type="2"/>
<REGION seq_beg="142" pdb_beg="142" seq_end="159" pdb_end="159" type="H"/>
<REGION seq_beg="160" pdb_beg="160" seq_end="168" pdb_end="168" type="1"/>
<REGION seq_beg="169" pdb_beg="169" seq_end="186" pdb_end="186" type="H"/>
<REGION seq_beg="187" pdb_beg="187" seq_end="190" pdb_end="190" type="2"/>
<REGION seq_beg="191" pdb_beg="191" seq_end="204" pdb_end="204" type="L"/>
<REGION seq_beg="205" pdb_beg="205" seq_end="211" pdb_end="211" type="2"/>
<REGION seq_beg="212" pdb_beg="212" seq_end="233" pdb_end="233" type="H"/>
<REGION seq_beg="234" pdb_beg="234" seq_end="239" pdb_end="239" type="1"/>
<REGION seq_beg="240" pdb_beg="240" seq_end="247" pdb_end="247" type="F"/>
<REGION seq_beg="248" pdb_beg="248" seq_end="249" pdb_end="249" type="1"/>
<REGION seq_beg="250" pdb_beg="250" seq_end="271" pdb_end="271" type="U"/>
</CHAIN>
<CHAIN CHAINID="D" NUM_TM="6" TYPE="alpha">
<SEQ>
MASEFKKKLF WRAVVAEFLA MILFIFISIG SALGFHYPIK SNQTTGAVQD
NVKVSLAFGL SIATLAQSVG HISGAHLNPA VTLGLLLSCQ ISVLRAIMYI
IAQCVGAIVA TAILSGITSS LPDNSLGLNA LAPGVNSGQG LGIEIIGTLQ
LVLCVLATTD RRRRDLGGSG PLAIGFSVAL GHLLAIDYTG CGINPARSFG
SSVITHNFQD HWIFWVGPFI GAALAVLIYD FILAPRSSDL TDRVKVWTSG
QVEEYDLDAD DINSRVEMKP K
</SEQ>
<REGION seq_beg="1" pdb_beg="1" seq_end="11" pdb_end="11" type="1"/>
<REGION seq_beg="12" pdb_beg="12" seq_end="32" pdb_end="32" type="H"/>
<REGION seq_beg="33" pdb_beg="33" seq_end="51" pdb_end="51" type="2"/>
<REGION seq_beg="52" pdb_beg="52" seq_end="70" pdb_end="70" type="H"/>
<REGION seq_beg="71" pdb_beg="71" seq_end="72" pdb_end="72" type="1"/>
<REGION seq_beg="73" pdb_beg="73" seq_end="88" pdb_end="88" type="L"/>
<REGION seq_beg="89" pdb_beg="89" seq_end="93" pdb_end="93" type="1"/>
<REGION seq_beg="94" pdb_beg="94" seq_end="114" pdb_end="114" type="H"/>
<REGION seq_beg="115" pdb_beg="115" seq_end="141" pdb_end="141" type="2"/>
<REGION seq_beg="142" pdb_beg="142" seq_end="159" pdb_end="159" type="H"/>
<REGION seq_beg="160" pdb_beg="160" seq_end="168" pdb_end="168" type="1"/>
<REGION seq_beg="169" pdb_beg="169" seq_end="186" pdb_end="186" type="H"/>
<REGION seq_beg="187" pdb_beg="187" seq_end="190" pdb_end="190" type="2"/>
<REGION seq_beg="191" pdb_beg="191" seq_end="204" pdb_end="204" type="L"/>
<REGION seq_beg="205" pdb_beg="205" seq_end="211" pdb_end="211" type="2"/>
<REGION seq_beg="212" pdb_beg="212" seq_end="233" pdb_end="233" type="H"/>
<REGION seq_beg="234" pdb_beg="234" seq_end="239" pdb_end="239" type="1"/>
<REGION seq_beg="240" pdb_beg="240" seq_end="247" pdb_end="247" type="F"/>
<REGION seq_beg="248" pdb_beg="248" seq_end="249" pdb_end="249" type="1"/>
<REGION seq_beg="250" pdb_beg="250" seq_end="271" pdb_end="271" type="U"/>
</CHAIN>
</pdbtm>
Overview
1j4n
PDB code:1j4n
Chain(s):
PDBTM type:Tm_Alpha
Title:CRYSTAL STRUCTURE OF THE AQP1 WATER CHANNEL
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