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structures,
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transmembrane structures,
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alpha helical,
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beta barrel.
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| Molecule of the month
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Influenza B proton channel
Influenza B virus is an important constituent of human seasonal flu that accounts for about 50% of all influenza disease in recent years (according to the US Centers for Disease Control website, the epidemic sesonal flu just outbrake in Hungary ...).
Influenza B virus contains an integral membrane protein, BM2, that oligomerizes in the viral membrane to form a pH-activated proton channel. This file contains the solution structures the membrane-embedded channel domain of BM2. The channel domain assumes a left-handed coiled-coil tetramer formation with a helical packing angle of -37° to form a polar pore in the membrane for conducting ions. Mutagenesis and proton flux experiments identified residues involved in proton relay and suggest a mechanism of proton conductance. The cytoplasmic domain of BM2 also forms a coiled-coil tetramer. It has a bipolar charge distribution, in which a negatively charged region interacts specifically with the M1 matrix protein that is involved in packaging the genome in the virion. This interaction suggests BM2 also recruits matrix proteins to the cell surface during virus budding, making BM2 an unusual membrane protein with the dual roles of conducting ions and recruiting proteins to the membrane.
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